Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_F22
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75542-6|CAA99864.3|  552|Caenorhabditis elegans Hypothetical pr...    31   0.82 
Z75538-3|CAA99842.3|  552|Caenorhabditis elegans Hypothetical pr...    31   0.82 
AF039047-13|AAM15587.1|  402|Caenorhabditis elegans Coexpressed ...    31   1.1  
Z74473-5|CAI79195.1|  245|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z81520-4|CAE17808.1|  181|Caenorhabditis elegans Hypothetical pr...    29   5.8  
U52002-6|AAB37732.1|  142|Caenorhabditis elegans Hypothetical pr...    29   5.8  
U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-li...    28   7.6  

>Z75542-6|CAA99864.3|  552|Caenorhabditis elegans Hypothetical
           protein F55D12.5 protein.
          Length = 552

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 138 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 266
           WP   ET     TT  T+  +P TTT+  T T  +T    T T
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTT 340


>Z75538-3|CAA99842.3|  552|Caenorhabditis elegans Hypothetical
           protein F55D12.5 protein.
          Length = 552

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 138 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 266
           WP   ET     TT  T+  +P TTT+  T T  +T    T T
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTT 340


>AF039047-13|AAM15587.1|  402|Caenorhabditis elegans Coexpressed
           with polycystins protein4 protein.
          Length = 402

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 126 LCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTV 251
           LC+LW  L  T T   TT  T+  +  TTT +      +TTV
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTV 220


>Z74473-5|CAI79195.1|  245|Caenorhabditis elegans Hypothetical
           protein F56H9.6 protein.
          Length = 245

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/43 (39%), Positives = 19/43 (44%)
 Frame = +3

Query: 144 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTGP 272
           T   T T   TT+ T+   P TTT     T  STT   T T P
Sbjct: 60  TTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102



 Score = 28.3 bits (60), Expect = 7.6
 Identities = 17/52 (32%), Positives = 20/52 (38%)
 Frame = +3

Query: 144 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTGPKGRPYFKPN 299
           T     T   TT+ T+   P TTT   T T  +TT     T     P   PN
Sbjct: 83  TTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMPPCNPN 134


>Z81520-4|CAE17808.1|  181|Caenorhabditis elegans Hypothetical
           protein F31B9.4 protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +3

Query: 144 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTGP 272
           T    A N+ TT  T+ I P T T     T  +TTV  T T P
Sbjct: 31  TTTSPAPNITTTTTTTTIAPPTNTTTTILTT-TTTVTTTTTSP 72


>U52002-6|AAB37732.1|  142|Caenorhabditis elegans Hypothetical
           protein F08B4.7 protein.
          Length = 142

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/55 (30%), Positives = 21/55 (38%)
 Frame = +3

Query: 147 LKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTGPKGRPYFKPNPFPG 311
           L +       T R    +P+TT  M     +    H    GP G P   P PFPG
Sbjct: 49  LVDQTARAFATNRMQGAVPRTTMGMAPVPPVGH--HPMMGGPPGMPMMAPRPFPG 101


>U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical
           protein F31D5.4 protein.
          Length = 989

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +3

Query: 141 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTGPKGRPYFKPNP 302
           PT   T+T+  +TA T+   P T+T   T T  ST    + T P   P  +P P
Sbjct: 283 PTTTATSTST-STASTTTTTPSTSTHTTTVT-YSTNATSSTTSPTTSPTPEPEP 334


>AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-like
           protein MTH-2 protein.
          Length = 971

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +3

Query: 141 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTGPKGRPYFKPNP 302
           PT   T+T+  +TA T+   P T+T   T T  ST    + T P   P  +P P
Sbjct: 265 PTTTATSTST-STASTTTTTPSTSTHTTTVT-YSTNATSSTTSPTTSPTPEPEP 316


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,434,427
Number of Sequences: 27780
Number of extensions: 277157
Number of successful extensions: 698
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)