Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_F20
(841 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 34 0.56
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 34 0.56
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 34 0.56
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 34 0.56
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 34 0.56
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 34 0.56
AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha... 31 5.2
AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alp... 31 5.2
AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alp... 31 5.2
BC009951-1|AAH09951.1| 268|Homo sapiens collectin sub-family me... 30 9.1
BC000078-1|AAH00078.1| 271|Homo sapiens collectin sub-family me... 30 9.1
AY358439-1|AAQ88805.1| 271|Homo sapiens RGNL596 protein. 30 9.1
AC010907-1|AAY24235.1| 271|Homo sapiens unknown protein. 30 9.1
AB119652-1|BAF43304.1| 223|Homo sapiens collectin kidney I prot... 30 9.1
AB119651-1|BAF43303.1| 247|Homo sapiens collectin kidney I prot... 30 9.1
AB119650-1|BAF43302.1| 247|Homo sapiens collectin kidney I prot... 30 9.1
AB119525-1|BAF43301.1| 271|Homo sapiens Collectin Kidney 1 prot... 30 9.1
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 34.3 bits (75), Expect = 0.56
Identities = 31/118 (26%), Positives = 32/118 (27%), Gaps = 3/118 (2%)
Frame = -3
Query: 839 GXKG--GXXXXPGGXXXPXXXGXPXXPXPXXVXX-TGXXGGXKXXGXXGXQXXXXXXXXX 669
G KG G PG G P P P TG G G G
Sbjct: 880 GPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGD 939
Query: 668 GVXEXPQXHXPXGGEXPXXLXNKXGXXXXPGXXGLKXXPXXGXXTQFXXFXXVXGFPG 495
G P P G + P G PG GL P T F G PG
Sbjct: 940 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPG 997
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 34.3 bits (75), Expect = 0.56
Identities = 31/118 (26%), Positives = 32/118 (27%), Gaps = 3/118 (2%)
Frame = -3
Query: 839 GXKG--GXXXXPGGXXXPXXXGXPXXPXPXXVXX-TGXXGGXKXXGXXGXQXXXXXXXXX 669
G KG G PG G P P P TG G G G
Sbjct: 880 GPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGD 939
Query: 668 GVXEXPQXHXPXGGEXPXXLXNKXGXXXXPGXXGLKXXPXXGXXTQFXXFXXVXGFPG 495
G P P G + P G PG GL P T F G PG
Sbjct: 940 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPG 997
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 34.3 bits (75), Expect = 0.56
Identities = 31/118 (26%), Positives = 32/118 (27%), Gaps = 3/118 (2%)
Frame = -3
Query: 839 GXKG--GXXXXPGGXXXPXXXGXPXXPXPXXVXX-TGXXGGXKXXGXXGXQXXXXXXXXX 669
G KG G PG G P P P TG G G G
Sbjct: 880 GPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGD 939
Query: 668 GVXEXPQXHXPXGGEXPXXLXNKXGXXXXPGXXGLKXXPXXGXXTQFXXFXXVXGFPG 495
G P P G + P G PG GL P T F G PG
Sbjct: 940 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPG 997
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 34.3 bits (75), Expect = 0.56
Identities = 31/118 (26%), Positives = 32/118 (27%), Gaps = 3/118 (2%)
Frame = -3
Query: 839 GXKG--GXXXXPGGXXXPXXXGXPXXPXPXXVXX-TGXXGGXKXXGXXGXQXXXXXXXXX 669
G KG G PG G P P P TG G G G
Sbjct: 880 GPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGD 939
Query: 668 GVXEXPQXHXPXGGEXPXXLXNKXGXXXXPGXXGLKXXPXXGXXTQFXXFXXVXGFPG 495
G P P G + P G PG GL P T F G PG
Sbjct: 940 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPG 997
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 34.3 bits (75), Expect = 0.56
Identities = 31/118 (26%), Positives = 32/118 (27%), Gaps = 3/118 (2%)
Frame = -3
Query: 839 GXKG--GXXXXPGGXXXPXXXGXPXXPXPXXVXX-TGXXGGXKXXGXXGXQXXXXXXXXX 669
G KG G PG G P P P TG G G G
Sbjct: 880 GPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGD 939
Query: 668 GVXEXPQXHXPXGGEXPXXLXNKXGXXXXPGXXGLKXXPXXGXXTQFXXFXXVXGFPG 495
G P P G + P G PG GL P T F G PG
Sbjct: 940 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPG 997
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V collagen
variant protein.
Length = 1792
Score = 34.3 bits (75), Expect = 0.56
Identities = 31/118 (26%), Positives = 32/118 (27%), Gaps = 3/118 (2%)
Frame = -3
Query: 839 GXKG--GXXXXPGGXXXPXXXGXPXXPXPXXVXX-TGXXGGXKXXGXXGXQXXXXXXXXX 669
G KG G PG G P P P TG G G G
Sbjct: 834 GPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGD 893
Query: 668 GVXEXPQXHXPXGGEXPXXLXNKXGXXXXPGXXGLKXXPXXGXXTQFXXFXXVXGFPG 495
G P P G + P G PG GL P T F G PG
Sbjct: 894 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPG 951
>AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha 1
chain precursor protein.
Length = 1860
Score = 31.1 bits (67), Expect = 5.2
Identities = 24/99 (24%), Positives = 27/99 (27%), Gaps = 1/99 (1%)
Frame = -3
Query: 782 GXPXXPXPXX-VXXTGXXGGXKXXGXXGXQXXXXXXXXXGVXEXPQXHXPXGGEXPXXLX 606
G P P P + G GG G G Q G+ P G + P
Sbjct: 1018 GPPGVPGPKGSMGHPGMPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQ 1077
Query: 605 NKXGXXXXPGXXGLKXXPXXGXXTQFXXFXXVXGFPGFP 489
G PG G P GFPG P
Sbjct: 1078 GSRGLKGPPGPQGRPGRPGQQGVAGERGHLGSRGFPGIP 1116
>AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alpha 1
protein.
Length = 1860
Score = 31.1 bits (67), Expect = 5.2
Identities = 24/99 (24%), Positives = 27/99 (27%), Gaps = 1/99 (1%)
Frame = -3
Query: 782 GXPXXPXPXX-VXXTGXXGGXKXXGXXGXQXXXXXXXXXGVXEXPQXHXPXGGEXPXXLX 606
G P P P + G GG G G Q G+ P G + P
Sbjct: 1018 GPPGVPGPKGSMGHPGMPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQ 1077
Query: 605 NKXGXXXXPGXXGLKXXPXXGXXTQFXXFXXVXGFPGFP 489
G PG G P GFPG P
Sbjct: 1078 GSRGLKGPPGPQGRPGRPGQQGVAGERGHLGSRGFPGIP 1116
>AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alpha 1
protein.
Length = 1860
Score = 31.1 bits (67), Expect = 5.2
Identities = 24/99 (24%), Positives = 27/99 (27%), Gaps = 1/99 (1%)
Frame = -3
Query: 782 GXPXXPXPXX-VXXTGXXGGXKXXGXXGXQXXXXXXXXXGVXEXPQXHXPXGGEXPXXLX 606
G P P P + G GG G G Q G+ P G + P
Sbjct: 1018 GPPGVPGPKGSMGHPGMPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQ 1077
Query: 605 NKXGXXXXPGXXGLKXXPXXGXXTQFXXFXXVXGFPGFP 489
G PG G P GFPG P
Sbjct: 1078 GSRGLKGPPGPQGRPGRPGQQGVAGERGHLGSRGFPGIP 1116
>BC009951-1|AAH09951.1| 268|Homo sapiens collectin sub-family
member 11 protein.
Length = 268
Score = 30.3 bits (65), Expect = 9.1
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Frame = +3
Query: 210 ENKFFRKDYTYIESTES-FYKIHTLYKKWVDAKKTCEMEGATFFXPDDKFEFDAVXTYWN 386
E KF + + TES Y + K++ DA+ +C+ G T P D+ + Y
Sbjct: 132 ELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLA 191
Query: 387 RHTLRXDQYXDLXXXXPRSLXTGDGVSXMDVXXXWKPGEPXDS 515
+ L + + S M W+ GEP ++
Sbjct: 192 QAGLAR-VFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNA 233
>BC000078-1|AAH00078.1| 271|Homo sapiens collectin sub-family
member 11 protein.
Length = 271
Score = 30.3 bits (65), Expect = 9.1
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Frame = +3
Query: 210 ENKFFRKDYTYIESTES-FYKIHTLYKKWVDAKKTCEMEGATFFXPDDKFEFDAVXTYWN 386
E KF + + TES Y + K++ DA+ +C+ G T P D+ + Y
Sbjct: 135 ELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLA 194
Query: 387 RHTLRXDQYXDLXXXXPRSLXTGDGVSXMDVXXXWKPGEPXDS 515
+ L + + S M W+ GEP ++
Sbjct: 195 QAGLAR-VFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNA 236
>AY358439-1|AAQ88805.1| 271|Homo sapiens RGNL596 protein.
Length = 271
Score = 30.3 bits (65), Expect = 9.1
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Frame = +3
Query: 210 ENKFFRKDYTYIESTES-FYKIHTLYKKWVDAKKTCEMEGATFFXPDDKFEFDAVXTYWN 386
E KF + + TES Y + K++ DA+ +C+ G T P D+ + Y
Sbjct: 135 ELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLA 194
Query: 387 RHTLRXDQYXDLXXXXPRSLXTGDGVSXMDVXXXWKPGEPXDS 515
+ L + + S M W+ GEP ++
Sbjct: 195 QAGLAR-VFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNA 236
>AC010907-1|AAY24235.1| 271|Homo sapiens unknown protein.
Length = 271
Score = 30.3 bits (65), Expect = 9.1
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Frame = +3
Query: 210 ENKFFRKDYTYIESTES-FYKIHTLYKKWVDAKKTCEMEGATFFXPDDKFEFDAVXTYWN 386
E KF + + TES Y + K++ DA+ +C+ G T P D+ + Y
Sbjct: 135 ELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLA 194
Query: 387 RHTLRXDQYXDLXXXXPRSLXTGDGVSXMDVXXXWKPGEPXDS 515
+ L + + S M W+ GEP ++
Sbjct: 195 QAGLAR-VFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNA 236
>AB119652-1|BAF43304.1| 223|Homo sapiens collectin kidney I
protein.
Length = 223
Score = 30.3 bits (65), Expect = 9.1
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Frame = +3
Query: 210 ENKFFRKDYTYIESTES-FYKIHTLYKKWVDAKKTCEMEGATFFXPDDKFEFDAVXTYWN 386
E KF + + TES Y + K++ DA+ +C+ G T P D+ + Y
Sbjct: 87 ELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLA 146
Query: 387 RHTLRXDQYXDLXXXXPRSLXTGDGVSXMDVXXXWKPGEPXDS 515
+ L + + S M W+ GEP ++
Sbjct: 147 QAGLAR-VFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNA 188
>AB119651-1|BAF43303.1| 247|Homo sapiens collectin kidney I
protein.
Length = 247
Score = 30.3 bits (65), Expect = 9.1
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Frame = +3
Query: 210 ENKFFRKDYTYIESTES-FYKIHTLYKKWVDAKKTCEMEGATFFXPDDKFEFDAVXTYWN 386
E KF + + TES Y + K++ DA+ +C+ G T P D+ + Y
Sbjct: 111 ELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLA 170
Query: 387 RHTLRXDQYXDLXXXXPRSLXTGDGVSXMDVXXXWKPGEPXDS 515
+ L + + S M W+ GEP ++
Sbjct: 171 QAGLAR-VFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNA 212
>AB119650-1|BAF43302.1| 247|Homo sapiens collectin kidney I
protein.
Length = 247
Score = 30.3 bits (65), Expect = 9.1
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Frame = +3
Query: 210 ENKFFRKDYTYIESTES-FYKIHTLYKKWVDAKKTCEMEGATFFXPDDKFEFDAVXTYWN 386
E KF + + TES Y + K++ DA+ +C+ G T P D+ + Y
Sbjct: 111 ELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLA 170
Query: 387 RHTLRXDQYXDLXXXXPRSLXTGDGVSXMDVXXXWKPGEPXDS 515
+ L + + S M W+ GEP ++
Sbjct: 171 QAGLAR-VFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNA 212
>AB119525-1|BAF43301.1| 271|Homo sapiens Collectin Kidney 1
protein.
Length = 271
Score = 30.3 bits (65), Expect = 9.1
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Frame = +3
Query: 210 ENKFFRKDYTYIESTES-FYKIHTLYKKWVDAKKTCEMEGATFFXPDDKFEFDAVXTYWN 386
E KF + + TES Y + K++ DA+ +C+ G T P D+ + Y
Sbjct: 135 ELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLA 194
Query: 387 RHTLRXDQYXDLXXXXPRSLXTGDGVSXMDVXXXWKPGEPXDS 515
+ L + + S M W+ GEP ++
Sbjct: 195 QAGLAR-VFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNA 236
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,565,458
Number of Sequences: 237096
Number of extensions: 1658176
Number of successful extensions: 8976
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8756
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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