Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_F17
         (913 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein pro...   148   3e-35
BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19 p...   148   3e-35
BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19 p...   148   3e-35
BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19 p...   148   3e-35
BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19 p...   148   3e-35
AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19 p...   148   3e-35

>M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein
           protein.
          Length = 145

 Score =  148 bits (358), Expect = 3e-35
 Identities = 68/111 (61%), Positives = 83/111 (74%)
 Frame = -1

Query: 517 KKRXKFKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKXFGGX 338
           KK  K KVPE +D VK A+ KELAPYD +WFY R A+  RH+Y+R   GV ++TK +GG 
Sbjct: 23  KKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGR 82

Query: 337 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIXTTQGRRDLDR 185
           +RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR  T QG+RDLDR
Sbjct: 83  QRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDR 133



 Score = 32.3 bits (70), Expect = 2.5
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -2

Query: 576 VTVKDVEQDKIVKTVAAHLKKNGQ 505
           VTVKDV Q + V+ +AA LKK+G+
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGK 27


>BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  148 bits (358), Expect = 3e-35
 Identities = 68/111 (61%), Positives = 83/111 (74%)
 Frame = -1

Query: 517 KKRXKFKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKXFGGX 338
           KK  K KVPE +D VK A+ KELAPYD +WFY R A+  RH+Y+R   GV ++TK +GG 
Sbjct: 23  KKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGR 82

Query: 337 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIXTTQGRRDLDR 185
           +RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR  T QG+RDLDR
Sbjct: 83  QRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDR 133



 Score = 32.3 bits (70), Expect = 2.5
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -2

Query: 576 VTVKDVEQDKIVKTVAAHLKKNGQ 505
           VTVKDV Q + V+ +AA LKK+G+
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGK 27


>BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19
           protein.
          Length = 157

 Score =  148 bits (358), Expect = 3e-35
 Identities = 68/111 (61%), Positives = 83/111 (74%)
 Frame = -1

Query: 517 KKRXKFKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKXFGGX 338
           KK  K KVPE +D VK A+ KELAPYD +WFY R A+  RH+Y+R   GV ++TK +GG 
Sbjct: 35  KKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGR 94

Query: 337 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIXTTQGRRDLDR 185
           +RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR  T QG+RDLDR
Sbjct: 95  QRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDR 145



 Score = 32.3 bits (70), Expect = 2.5
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -2

Query: 576 VTVKDVEQDKIVKTVAAHLKKNGQ 505
           VTVKDV Q + V+ +AA LKK+G+
Sbjct: 16  VTVKDVNQQEFVRALAAFLKKSGK 39


>BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  148 bits (358), Expect = 3e-35
 Identities = 68/111 (61%), Positives = 83/111 (74%)
 Frame = -1

Query: 517 KKRXKFKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKXFGGX 338
           KK  K KVPE +D VK A+ KELAPYD +WFY R A+  RH+Y+R   GV ++TK +GG 
Sbjct: 23  KKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGR 82

Query: 337 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIXTTQGRRDLDR 185
           +RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR  T QG+RDLDR
Sbjct: 83  QRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDR 133



 Score = 32.3 bits (70), Expect = 2.5
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -2

Query: 576 VTVKDVEQDKIVKTVAAHLKKNGQ 505
           VTVKDV Q + V+ +AA LKK+G+
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGK 27


>BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  148 bits (358), Expect = 3e-35
 Identities = 68/111 (61%), Positives = 83/111 (74%)
 Frame = -1

Query: 517 KKRXKFKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKXFGGX 338
           KK  K KVPE +D VK A+ KELAPYD +WFY R A+  RH+Y+R   GV ++TK +GG 
Sbjct: 23  KKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGR 82

Query: 337 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIXTTQGRRDLDR 185
           +RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR  T QG+RDLDR
Sbjct: 83  QRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDR 133



 Score = 32.3 bits (70), Expect = 2.5
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -2

Query: 576 VTVKDVEQDKIVKTVAAHLKKNGQ 505
           VTVKDV Q + V+ +AA LKK+G+
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGK 27


>AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  148 bits (358), Expect = 3e-35
 Identities = 68/111 (61%), Positives = 83/111 (74%)
 Frame = -1

Query: 517 KKRXKFKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKXFGGX 338
           KK  K KVPE +D VK A+ KELAPYD +WFY R A+  RH+Y+R   GV ++TK +GG 
Sbjct: 23  KKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGR 82

Query: 337 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIXTTQGRRDLDR 185
           +RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR  T QG+RDLDR
Sbjct: 83  QRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDR 133



 Score = 32.3 bits (70), Expect = 2.5
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -2

Query: 576 VTVKDVEQDKIVKTVAAHLKKNGQ 505
           VTVKDV Q + V+ +AA LKK+G+
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGK 27


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,053,806
Number of Sequences: 237096
Number of extensions: 2144097
Number of successful extensions: 3327
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3327
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)