Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_F16
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043...    32   0.70 
01_02_0021 + 10281611-10281997                                         28   8.7  

>09_06_0147 +
           21195222-21195377,21195471-21195522,21196842-21204362,
           21204453-21205031,21205176-21205484,21205638-21205718,
           21205971-21206279,21207430-21207816,21207964-21208767,
           21208856-21209218,21209437-21209667,21209934-21210278,
           21210494-21210712,21210759-21210815,21210978-21211322,
           21211538-21211756,21211803-21211859,21212022-21212366,
           21212584-21212814,21213100-21213458
          Length = 4322

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +3

Query: 330 AWPSRRSPEEDWALTSSTSN*RAIEDPASSLLSKYT 437
           A+P ++ P ED    +STSN R  +D  S+  SK+T
Sbjct: 772 AFPQKQPPAEDLRFAASTSNRRYFDDQDSTKKSKHT 807


>01_02_0021 + 10281611-10281997
          Length = 128

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 253 GAGGILRIPSAGAEDQGHRYKGPREWLGRAVDHPRRIG 366
           G+GG + +   G  + G    GPRE L    DHP R G
Sbjct: 53  GSGGSVAV---GPHEHGSSAAGPREALPCCRDHPHRCG 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,790,695
Number of Sequences: 37544
Number of extensions: 333121
Number of successful extensions: 795
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)