Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_F12
(983 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 39 0.001
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.015
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.082
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.14
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.25
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.76
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 7.1
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 7.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 7.1
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 26 9.4
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 9.4
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 39.1 bits (87), Expect = 0.001
Identities = 29/107 (27%), Positives = 36/107 (33%)
Frame = +3
Query: 480 PXPXXVXXLPXQPXXTWPPPXPXXPXXPLLXSRXXXPXXPPVXSXXSXXPXXXSFLPXPP 659
P P +P P PP P P P + R P P S P +P P
Sbjct: 590 PQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQ--PPAAPVVPEVP 647
Query: 660 XXXXPPRPPLXXXXXVLSPPPPPXXXXSPXCXXPXSLPXPPSXLXXP 800
P RP + S P PP +P S+P PP+ P
Sbjct: 648 --SVPQRPAVPVVPEAPSVPQPP---AAPVVPEVPSVPQPPAVPVVP 689
Score = 36.3 bits (80), Expect = 0.007
Identities = 28/102 (27%), Positives = 34/102 (33%), Gaps = 1/102 (0%)
Frame = +3
Query: 480 PXPXXVXXLPXQPXXTWPPPXPXXPXXPLLXSRXXXPXXPPVXSXXSXXPXXXSFLPXPP 659
P P +P P PP P P P R P P S +P P
Sbjct: 515 PQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPA-----VPVVP 569
Query: 660 XXXXPPRPPL-XXXXXVLSPPPPPXXXXSPXCXXPXSLPXPP 782
P+PP+ V S P PP +P S+P PP
Sbjct: 570 EALSVPQPPVAPVAPEVPSVPQPP---VAPVVPEAPSVPQPP 608
Score = 33.9 bits (74), Expect = 0.035
Identities = 27/107 (25%), Positives = 32/107 (29%)
Frame = +3
Query: 480 PXPXXVXXLPXQPXXTWPPPXPXXPXXPLLXSRXXXPXXPPVXSXXSXXPXXXSFLPXPP 659
P P P P PP P P P + P P V S +P P
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQR--PAVPVVPEAP 632
Query: 660 XXXXPPRPPLXXXXXVLSPPPPPXXXXSPXCXXPXSLPXPPSXLXXP 800
PP P+ V P P P S+P PP+ P
Sbjct: 633 SVPQPPAAPV-----VPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVP 674
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.015
Identities = 40/155 (25%), Positives = 46/155 (29%), Gaps = 3/155 (1%)
Frame = +3
Query: 360 PPPRPPXXSSXXVSQPXPXXLXXSXAXXPXXXXXFXPXXXPXPXXVXXLPXQPXXTWPP- 536
PPP PP S+ S P P S P P P P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQ-GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAI 395
Query: 537 PXPXXPXXPLLXSRXXXPXXPPVXSXXSXXPXXXSFLPXPPXXXXPPRPPLXXXXXVLSP 716
P P P L + PPV P S P P P PP +P
Sbjct: 396 PGRSAPALPPLGNASRTST-PPV-------PTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 717 PPPPXXXXSP--XCXXPXSLPXPPSXLXXPXXYPP 815
P PP +P P + P PP+ P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 32.7 bits (71), Expect = 0.082
Identities = 40/157 (25%), Positives = 46/157 (29%), Gaps = 2/157 (1%)
Frame = +3
Query: 363 PPRPPXXSSXXVSQPXPXXLXXSXAXXPXXXXXFXPXXXPXPXXVXXLPXQPXXTWPPPX 542
PP PP S +P P S + P P P +P P PP
Sbjct: 311 PPPPPPPSRRNRGKP-PIGNGSSNSSLPP------PPPPPRSNAAGSIPLPPQGRSAPPP 363
Query: 543 PXXPXXPLLXSRXXXPXXPPVXSXXSXXPXXXSFLPXPPXXXXPPRPPLXXXXXVLSPPP 722
P P + PP S + P P P PPL +PP
Sbjct: 364 PPPRSAPSTGRQ------PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPV 417
Query: 723 PPXXXXSPXCXXPXSLP--XPPSXLXXPXXYPPXXXS 827
P P P SLP PPS PP S
Sbjct: 418 PTPPSLPPSA--PPSLPPSAPPSLPMGAPAAPPLPPS 452
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.082
Identities = 28/114 (24%), Positives = 34/114 (29%), Gaps = 3/114 (2%)
Frame = +3
Query: 480 PXPXXVXXLPXQPXXTWPPPXPXXPXXPLLX--SRXXXPXXPPVXSXXSXXPXXXSFLPX 653
P P P P + PP P P + S PPV + S P +
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA 1082
Query: 654 PPXXXXPPRPPLXXXXXVLSPPPPPXXXXSPXCXXPXSLPXP-PSXLXXPXXYP 812
PP PP+ P P P P + P P PS P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 31.1 bits (67), Expect = 0.25
Identities = 30/158 (18%), Positives = 39/158 (24%), Gaps = 6/158 (3%)
Frame = +3
Query: 360 PPPRPPXXSSXXVSQPXPXXLXXSXAXXPXXXXXFXPXXXPXPXXVXXLPXQPXXTWPPP 539
P PP S + P + + P P P + +P P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Query: 540 XPXXPXXPLLXSRXXXPXX------PPVXSXXSXXPXXXSFLPXPPXXXXPPRPPLXXXX 701
P P+ P PPV P + PP PP+
Sbjct: 1106 KPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
Query: 702 XVLSPPPPPXXXXSPXCXXPXSLPXPPSXLXXPXXYPP 815
P P P P +P P P P
Sbjct: 1166 VAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 31.1 bits (67), Expect = 0.25
Identities = 39/156 (25%), Positives = 42/156 (26%), Gaps = 10/156 (6%)
Frame = +3
Query: 345 GXPXXPPPR--PPXXSSXXVSQPXPXXLXXSXAXXPXXXXXFXPXXXPXPXXVXXLPXQP 518
G P P P PP + P P S A P P P P P P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKP---SVAVPPVPAPSGAP---PVPKPSVAAPPVP 1134
Query: 519 XXTWPPPXPXX----PXXPLLXSRXXXPXX----PPVXSXXSXXPXXXSFLPXPPXXXXP 674
+ PP P P P P PPV + S P P P
Sbjct: 1135 VPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Query: 675 PRPPLXXXXXVLSPPPPPXXXXSPXCXXPXSLPXPP 782
P V PP PP P LP P
Sbjct: 1195 SEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 29.9 bits (64), Expect = 0.58
Identities = 38/162 (23%), Positives = 47/162 (29%), Gaps = 5/162 (3%)
Frame = +3
Query: 345 GXPXXPPPRPPXXSSXXVSQPXPXXLXXSXAXXPXXXXXFXPXXXPX-PXXVXXLPXQPX 521
G P PPP P SS S P P A P P +P P
Sbjct: 1058 GAPSAPPP-VPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPA 1116
Query: 522 XTWPPPXPXX----PXXPLLXSRXXXPXXPPVXSXXSXXPXXXSFLPXPPXXXXPPRPPL 689
+ PP P P P+ P P V + P +P P PP+
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPK-PSVAAPPVPAPSGAPPVPKPSVAA----PPV 1171
Query: 690 XXXXXVLSPPPPPXXXXSPXCXXPXSLPXPPSXLXXPXXYPP 815
+ P P P P + P P + P PP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 28.7 bits (61), Expect = 1.3
Identities = 33/149 (22%), Positives = 38/149 (25%), Gaps = 2/149 (1%)
Frame = +3
Query: 375 PXXSSXXVSQPXPXXLXXSXAXXPXXXXXFXPXXXPXPXXVXXLPX-QPXXTWPP-PXPX 548
P S P P P P P P +P T P P
Sbjct: 951 PSNDGRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLAR 1010
Query: 549 XPXXPLLXSRXXXPXXPPVXSXXSXXPXXXSFLPXPPXXXXPPRPPLXXXXXVLSPPPPP 728
P P L S+ P P + P + P P PP P PP P
Sbjct: 1011 VPPVPKLSSKA--PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPA 1068
Query: 729 XXXXSPXCXXPXSLPXPPSXLXXPXXYPP 815
P P P P+ P P
Sbjct: 1069 PSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Score = 28.3 bits (60), Expect = 1.8
Identities = 34/150 (22%), Positives = 40/150 (26%), Gaps = 6/150 (4%)
Frame = +3
Query: 351 PXXPPPRPPXXSSXXVSQPXPXXLXXSXAXXPXXXXXFXPXXXPXPXXVXXLPXQPXXTW 530
P P P S P + S P P P +P P +
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 531 PPPXPXXPXXPLLXS-RXXXPXXPPVXSXXSXXPXXXSFLPXP-PXXXXPPRPPLXXXXX 704
PP P P + P P P P P P PP P
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Query: 705 VLSP----PPPPXXXXSPXCXXPXSLPXPP 782
V P PP P +P P S+ PP
Sbjct: 1142 VPKPSVAAPPVPAPSGAPPVPKP-SVAAPP 1170
Score = 26.2 bits (55), Expect = 7.1
Identities = 28/132 (21%), Positives = 34/132 (25%)
Frame = +3
Query: 351 PXXPPPRPPXXSSXXVSQPXPXXLXXSXAXXPXXXXXFXPXXXPXPXXVXXLPXQPXXTW 530
P P P V+ P P + P P P P +P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAP-PVPVPSGAPPVPKPSVAAPPV--PAPSGAPPVPKPSVAAP 1169
Query: 531 PPPXPXXPXXPLLXSRXXXPXXPPVXSXXSXXPXXXSFLPXPPXXXXPPRPPLXXXXXVL 710
P P P P+ P PP P + PP PP+ L
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPP---PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGL 1226
Query: 711 SPPPPPXXXXSP 746
P P P P
Sbjct: 1227 PPVPVPTAKAPP 1238
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +3
Query: 588 PXXPPVXSXXSXXPXXXSFLPXPPXXXXPPRPPLXXXXXVLSPPPPP 728
P PP + P P P PP PP PPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +3
Query: 672 PPRPPLXXXXXVLSPPPPPXXXXSPXCXXPXSLPXPPSXLXXPXXYPP 815
PP PP +P P P +P P P PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 26.6 bits (56), Expect = 5.4
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +3
Query: 627 PXXXSFLPXPPXXXXPPRPPLXXXXXVLSPPPPPXXXXSPXCXXPXSLPXPPS 785
P +P P P PP PPPPP P P PP+
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMG---GPPPPPPPPGVAGAGPPPPPPPPPA 784
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.25
Identities = 19/80 (23%), Positives = 22/80 (27%)
Frame = +3
Query: 654 PPXXXXPPRPPLXXXXXVLSPPPPPXXXXSPXCXXPXSLPXPPSXLXXPXXYPPXXXSXX 833
PP PP P +PP P SP P PP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 834 XXXXXXXXXSIXPTPYLYPP 893
++ P P PP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPP 203
Score = 26.6 bits (56), Expect = 5.4
Identities = 25/83 (30%), Positives = 27/83 (32%), Gaps = 3/83 (3%)
Frame = +3
Query: 543 PXXPXXPLLXSRXXXPXX-PPVXSXXSXXPXXXSFLPX--PPXXXXPPRPPLXXXXXVLS 713
P P P S P PP S P +P PP P PP V S
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP-PPAQPAAPVKS 183
Query: 714 PPPPPXXXXSPXCXXPXSLPXPP 782
PP P S P +P PP
Sbjct: 184 PPSAPSLP-SAVPPMPPKVPPPP 205
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.76
Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = +3
Query: 597 PPVXSXXSXXPXXXSFLPXPPXXXXPPRP--PLXXXXXVLSPPPPPXXXXSPXCXXP 761
PPV + P + P PP PP P P +PPPP +P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 7.1
Identities = 16/52 (30%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 648 PXPPXXXXPPRPPLXXXXXVLSP-PPPPXXXXSPXCXXPXSLPXPPSXLXXP 800
P P P RP + +P PPPP P P PPS P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 654 PPXXXXPPRPPLXXXXXVLSPPPPP 728
PP PP PP PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +3
Query: 516 PXXTWPPPXPXXPXXPLLXSRXXXPXXPPVXSXXSXXPXXXSFLPXPPXXXX-PPRPP 686
P P P P P P L + P+ S +P PP PPRPP
Sbjct: 229 PKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 7.1
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -2
Query: 817 KGG*XXGXXRXEGGXGXEXGXXXXGEXXXXGGGGGESTXXXXXXGGRGGXXXXGGXG 647
+GG G GG G G GG G GGRGG GG G
Sbjct: 11 RGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGS--SGGRG 65
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +2
Query: 671 PPXPSXPXXXXRAFSPXPXXSX--TLSPXXPPXFXSXSPLXPXXP 799
PP P+ + SP P S T S PP S +P+ P P
Sbjct: 316 PPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVP 360
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 25.8 bits (54), Expect = 9.4
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +2
Query: 680 PSXPXXXXRAFSPXPXXSXTLSPXXPPXFXSXSPLXPXXPXPLPPLXXLXLXXXXXP 850
PS P R+FSP P + ++P P P+ LP + L L P
Sbjct: 399 PSSPTFSTRSFSPTPDVTPLVTPAHSPRL---RPMDDPSCVQLPSIRSLSLRPSQVP 452
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/46 (28%), Positives = 17/46 (36%)
Frame = +2
Query: 674 PXPSXPXXXXRAFSPXPXXSXTLSPXXPPXFXSXSPLXPXXPXPLP 811
P P P +A P + L P PP + P P P+P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVP 1927
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,519,336
Number of Sequences: 5004
Number of extensions: 17722
Number of successful extensions: 135
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 507285244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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