Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_F10
         (855 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81118-10|CAB61029.1|  657|Caenorhabditis elegans Hypothetical p...    29   3.2  
Z81118-1|CAB03329.1|  478|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z77668-2|CAB61021.1|  657|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AJ000538-1|CAA04171.1|  657|Caenorhabditis elegans GluClalpha2A ...    29   3.2  
AJ000537-1|CAA04170.1|  478|Caenorhabditis elegans GluClalpha2B ...    29   3.2  
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    28   9.7  
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    28   9.7  

>Z81118-10|CAB61029.1|  657|Caenorhabditis elegans Hypothetical
           protein R11G10.1a protein.
          Length = 657

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +1

Query: 559 YLYYLHIQYLPKKICLSITLTYISTWLENTXILLYTNXYLHKKLTRM*QSSSLSCLL 729
           + YYL   Y+P   C+ + ++++S W++ T +       +   LT   QSS ++  L
Sbjct: 466 FSYYLLQLYIPS--CMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKL 520


>Z81118-1|CAB03329.1|  478|Caenorhabditis elegans Hypothetical
           protein R11G10.1b protein.
          Length = 478

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +1

Query: 559 YLYYLHIQYLPKKICLSITLTYISTWLENTXILLYTNXYLHKKLTRM*QSSSLSCLL 729
           + YYL   Y+P   C+ + ++++S W++ T +       +   LT   QSS ++  L
Sbjct: 287 FSYYLLQLYIPS--CMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKL 341


>Z77668-2|CAB61021.1|  657|Caenorhabditis elegans Hypothetical
           protein R11G10.1a protein.
          Length = 657

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +1

Query: 559 YLYYLHIQYLPKKICLSITLTYISTWLENTXILLYTNXYLHKKLTRM*QSSSLSCLL 729
           + YYL   Y+P   C+ + ++++S W++ T +       +   LT   QSS ++  L
Sbjct: 466 FSYYLLQLYIPS--CMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKL 520


>AJ000538-1|CAA04171.1|  657|Caenorhabditis elegans GluClalpha2A
           protein protein.
          Length = 657

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +1

Query: 559 YLYYLHIQYLPKKICLSITLTYISTWLENTXILLYTNXYLHKKLTRM*QSSSLSCLL 729
           + YYL   Y+P   C+ + ++++S W++ T +       +   LT   QSS ++  L
Sbjct: 466 FSYYLLQLYIPS--CMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKL 520


>AJ000537-1|CAA04170.1|  478|Caenorhabditis elegans GluClalpha2B
           protein protein.
          Length = 478

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +1

Query: 559 YLYYLHIQYLPKKICLSITLTYISTWLENTXILLYTNXYLHKKLTRM*QSSSLSCLL 729
           + YYL   Y+P   C+ + ++++S W++ T +       +   LT   QSS ++  L
Sbjct: 287 FSYYLLQLYIPS--CMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKL 341


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
            ZK945.9 protein.
          Length = 3178

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 385  FFSSYIFIKLCYYVLSKIDKFRFWYHVKMTDKKRAREKTY 504
            F S YI + L YY     D+  +WY ++M+      +K Y
Sbjct: 2577 FASLYIMVMLTYYCK---DRHGYWYQLEMSTILNINQKNY 2613


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
            protein ZK945.9 protein.
          Length = 3178

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 385  FFSSYIFIKLCYYVLSKIDKFRFWYHVKMTDKKRAREKTY 504
            F S YI + L YY     D+  +WY ++M+      +K Y
Sbjct: 2577 FASLYIMVMLTYYCK---DRHGYWYQLEMSTILNINQKNY 2613


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,984,402
Number of Sequences: 27780
Number of extensions: 390390
Number of successful extensions: 968
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)