Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_F10
         (855 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   2.1  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   2.7  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   4.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   4.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   6.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.3  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   8.3  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 586 LPKKICLSITLTYISTWL 639
           +P K CLS+TL  ++T L
Sbjct: 701 VPSKFCLSVTLLTVATSL 718


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 796 HYCDSDRLVNLSKGFFSHYQLRTI 725
           H  D D ++ L K  FSHY+ + +
Sbjct: 263 HNKDDDLILTLGKKEFSHYEHQNV 286


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 742 NEKKNPYLNLPTDHYHSNVNL 804
           N+ KN Y N   +HY S+ +L
Sbjct: 109 NDPKNQYKNQNNNHYTSHQHL 129


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 787 DSDRLVNLSKGFFSHYQLRTIGTTVKTIVTF 695
           + D++   S GF +  ++RT+  TV  I  F
Sbjct: 239 EDDKIRRSSIGFLTRAKIRTLKMTVIIIAVF 269


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 580 QYLPKKICLSITLTYI 627
           +YLP  + + ITLTY+
Sbjct: 26  KYLPLTLIVPITLTYV 41


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +1

Query: 502  YRHFLSGVDPTI-TYALL 552
            +RHF+SG+D  +  YA L
Sbjct: 988  HRHFISGIDSNLHVYAPL 1005


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 410 NYVITY*VKLTNFDSGIMLK*RIKKEH 490
           +YVI+  VK T+F    M+K  +K +H
Sbjct: 425 SYVISGIVKCTDFVDKAMVKQYVKVKH 451


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,194
Number of Sequences: 438
Number of extensions: 4539
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)