Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_F08
         (846 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    25   0.88 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    25   0.88 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.2  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.2  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 597 LSVFINCW*PTTW*SSVNKFXSTPHAKKSWTACSACWVG 481
           +S FI CW P    + V  F   P A  ++ +    W+G
Sbjct: 378 MSAFIVCWLPFFVLALVRPFLKNPDAIPAFLSSLFLWLG 416


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 95  ATNIFATCFRFVECKSNLKEFPYSEV 18
           ATN F T   F +C   L   P+S +
Sbjct: 79  ATNYFVTSLAFADCLVGLVVMPFSAI 104


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 484 RQLLPKVANETDPYGYIIVV 425
           R LLPK   E  PY  ++VV
Sbjct: 601 RLLLPKGKKEGMPYNVLVVV 620


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -3

Query: 394 RSFINFSVASSHE*IAQVLE 335
           RSF+ FS+  S + +A+V++
Sbjct: 296 RSFVPFSIERSSQSVAEVMD 315


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 484 RQLLPKVANETDPYGYIIVV 425
           R LLPK   E  PY  ++VV
Sbjct: 601 RLLLPKGKKEGMPYNVLVVV 620


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,112
Number of Sequences: 438
Number of extensions: 5147
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)