Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_F07
(1001 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 24 1.6
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 24 2.1
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 23 3.7
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 23 3.7
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 3.7
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 3.7
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 3.7
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 23 4.9
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 6.5
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 617 PPPPPPPXXPS 649
PPPPPPP S
Sbjct: 731 PPPPPPPRVES 741
Score = 22.2 bits (45), Expect = 6.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 696 APXPPPPP 719
AP PPPPP
Sbjct: 730 APPPPPPP 737
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +2
Query: 542 PPPPXXXPPPPQKXPXPPXXPXXPXPPP 625
P P P +K P P P PPP
Sbjct: 78 PSPKRSSPILAEKVSVSPTTPPTPSPPP 105
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 23.0 bits (47), Expect = 3.7
Identities = 14/52 (26%), Positives = 14/52 (26%)
Frame = +1
Query: 562 PPPPXKXPXPPPXSXXPXPPPPXPPXPPLXXXXPPPPPXPXSXXXXXXPPPP 717
P P P P P P P P PL S PP P
Sbjct: 71 PLPSDGTTSPEPDPEIPVAPEPAPLASPLVQEPGSSTTSATSGAVMASPPMP 122
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -1
Query: 995 GEGRXXGGXGXGGGGGXXXXGGGG 924
GE G G GGG GGG
Sbjct: 85 GENNDDSGGGRGGGRDGDRGDGGG 108
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = -1
Query: 989 GRXXGGXGXGGGGGXXXXGGGGGGXD 912
G G G GGG G GGG +
Sbjct: 85 GENNDDSGGGRGGGRDGDRGDGGGEE 110
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -1
Query: 686 EXGXGGGGGXXXXRGGXGGXGGG 618
E GGG R G G GGG
Sbjct: 86 ENNDDSGGGRGGGRDGDRGDGGG 108
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -1
Query: 635 GGXGGGGXGXXXXGGG 588
GG GGG G GGG
Sbjct: 93 GGRGGGRDGDRGDGGG 108
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 718 GGGGGXGAPXXRXXGGG 668
GGG G G R GGG
Sbjct: 92 GGGRGGGRDGDRGDGGG 108
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 562 PPPPXKXPXPPPXSXXPXPPPPXP 633
PP P P PP S P P P
Sbjct: 231 PPHPGLSPHPPHLSSHPAIVTPGP 254
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +2
Query: 563 PPPPQKXPXPPXXPXXPXP 619
PPPP PP P P
Sbjct: 736 PPPPHPHHQPPRNPVGTNP 754
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 562 PPPPXKXPXPPPXSXXPXPPPPXP 633
PP P P PP S P P P
Sbjct: 123 PPHPGLSPHPPHLSSHPAIVTPGP 146
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +2
Query: 563 PPPPQKXPXPPXXPXXPXP 619
PPPP PP P P
Sbjct: 628 PPPPHPHHQPPRNPVGTNP 646
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 636 GGGGGGGXGXXGXXGG 589
GGGGG G G GG
Sbjct: 524 GGGGGSGSGNNQPPGG 539
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +1
Query: 583 PXPPPXSXXPXPPPPXPPXPPLXXXXPPPPPXPXSXXXXXXPP 711
P P P P PP L PP P P PP
Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/29 (34%), Positives = 10/29 (34%)
Frame = +2
Query: 563 PPPPQKXPXPPXXPXXPXPPPPPPPXXPS 649
PP PQ P P PPP S
Sbjct: 12 PPAPQSAATPISSSGMTSPAAAPPPATTS 40
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,281
Number of Sequences: 336
Number of extensions: 6308
Number of successful extensions: 38
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28547508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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