BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_F06
(912 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1263 - 25695622-25695856,25696608-25696653,25696882-25697014 64 2e-10
09_04_0615 + 18972227-18972250,18972293-18972397,18973492-189735... 62 6e-10
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 33 0.24
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.42
07_03_1136 + 24218601-24218734,24218769-24219906 31 0.96
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 0.96
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 31 0.96
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 1.7
12_02_1122 - 26244667-26245299 30 2.2
11_06_0610 - 25449085-25453284 29 5.1
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 5.1
12_02_1174 - 26696869-26698191 29 6.8
11_01_0359 - 2731522-2732346 29 6.8
07_01_0479 + 3606663-3607448 29 6.8
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 29 6.8
03_01_0515 - 3864796-3865425 29 6.8
01_06_0383 - 28903620-28904077,28904172-28904259 29 6.8
11_06_0188 + 21036465-21036627,21036735-21036883,21037369-210374... 28 9.0
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 28 9.0
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 28 9.0
>08_02_1263 - 25695622-25695856,25696608-25696653,25696882-25697014
Length = 137
Score = 63.7 bits (148), Expect = 2e-10
Identities = 30/80 (37%), Positives = 40/80 (50%)
Frame = +2
Query: 197 CTNRPFFHISVTHRRRLNSQPVIEQLGSYDPMPNINNEKLVALNLERLKYWLGKGAHVST 376
C NRPF+ + R +E LG YDP+P + K + L +R+KYWL GA S
Sbjct: 12 CRNRPFYRLMAADSRSPRDGKHLEVLGYYDPLPGKDGGKRMGLKFDRVKYWLSVGAQPSD 71
Query: 377 PVSELLGLSGFFPIHPRTYM 436
PV +L +G P P M
Sbjct: 72 PVERILYRAGILPPPPMLAM 91
>09_04_0615 +
18972227-18972250,18972293-18972397,18973492-18973584,
18973887-18973993,18974107-18974157,18974675-18974928,
18975176-18975221,18975896-18976127
Length = 303
Score = 62.1 bits (144), Expect = 6e-10
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = +2
Query: 197 CTNRPFFHISVTHRRRLNSQPVIEQLGSYDPMPNINNEKLVALNLERLKYWLGKGAHVST 376
C NRPF+ + R +E LG Y+P+P + K + L +R+KYWL GA S
Sbjct: 179 CRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGKDGGKRMGLKFDRVKYWLSVGAQPSD 238
Query: 377 PVSELLGLSGFFPIHPRTYM 436
PV +L +G P P M
Sbjct: 239 PVQRILFRAGLLPPPPMLAM 258
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = -2
Query: 788 PSXPPGXXXGGNRXGXQPEXXGXXGXSXGGGXGRGXPXXXXXLPPXXXGGGXXXXGXXXX 609
P P GGN+ G P G GGG G G PP GGG G
Sbjct: 426 PGGPNRYPQGGNQGGYNPNRGGQ-----GGGYGSGPYPQQGRGPPPYPGGGMGGAGGPRG 480
Query: 608 XXXXXXGXGG 579
G GG
Sbjct: 481 GGGSGYGVGG 490
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.7 bits (71), Expect = 0.42
Identities = 23/82 (28%), Positives = 24/82 (29%)
Frame = +2
Query: 581 PPXPXXXXXXXXXXPXXXXPPXXPXGXGXXGXWGPPXRFXPPXTPXGPRXXXVGXQXGFP 760
PP P P PP P G P PP P P G + G P
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGP 377
Query: 761 XXSXRGGNXGFPPXTPRGXPXG 826
G PP P G P G
Sbjct: 378 PPPPPKGGASRPPAAP-GVPTG 398
Score = 32.3 bits (70), Expect = 0.55
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = +3
Query: 582 PXXPXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSP 761
P P PP P PP G PP P P P P P
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPP--PPPAKGPPPPPPPKGPSPP--P 366
Query: 762 XXPPGGXTXGFPPXXP 809
PPGG G PP P
Sbjct: 367 PPPPGGKKGGPPPPPP 382
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +3
Query: 582 PXXPXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPG 728
P P PPPP P PP G PP P PG
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPG 394
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = +3
Query: 582 PXXPXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSP 761
P P PPPP P PP G PP P P P +P
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPK---GPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAP 393
Query: 762 XXPPG 776
P G
Sbjct: 394 GVPTG 398
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.5 bits (68), Expect = 0.96
Identities = 22/73 (30%), Positives = 22/73 (30%), Gaps = 6/73 (8%)
Frame = -2
Query: 779 PPGXXXGGNRXGXQPEXXGXXG------XSXGGGXGRGXPXXXXXLPPXXXGGGXXXXGX 618
PPG GG G P G G GGG G G P GGG G
Sbjct: 172 PPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGGGEGGAPERVIGGGGGGGGA 231
Query: 617 XXXXXXXXXGXGG 579
G GG
Sbjct: 232 LKCVVGGGGGGGG 244
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = -3
Query: 808 GXXGGKPXVXPPGGXXGETGLXXNXXXPGXXGXXXGXEXXGGXPXXXXPXPRXXXGGXXX 629
G GG P PGG G G G G G GG P G
Sbjct: 176 GGGGGGPG-RAPGGGGGGGGPGRAPGGGGGGGGLGGGGGEGGAPERVIGGGGGGGGALKC 234
Query: 628 XXXGXGGGG 602
G GGGG
Sbjct: 235 VVGGGGGGG 243
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.5 bits (68), Expect = 0.96
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +3
Query: 603 PPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSPXXPPGGX 782
PPPP PP G PP P P L P P PP G
Sbjct: 1112 PPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPP--PPAGF 1169
Query: 783 TXGFPP 800
G PP
Sbjct: 1170 RGGTPP 1175
Score = 31.5 bits (68), Expect = 0.96
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = +3
Query: 606 PPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSPXXPPGGXT 785
PPP P PP G G PP + P P P PPG
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAGFRG-GTPPPNAHGGVAPPPPPPRGHGGVG-GPPTPPGAPA 1206
Query: 786 XGFPPXXPGDXP 821
PP PG P
Sbjct: 1207 PPMPPGVPGGPP 1218
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/70 (31%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = +3
Query: 606 PPPXPXXXXXXPPXXXRGXGXXXXGX-PPXXSXPXXXPXXPGXFXLXXXPVSPXXPPGGX 782
PPP PP RG G PP P P PG P PPGG
Sbjct: 1174 PPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPG---------GPPPPPGGR 1224
Query: 783 TXGFPPXXPG 812
PP G
Sbjct: 1225 GLPAPPGGRG 1234
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 31.5 bits (68), Expect = 0.96
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 3/72 (4%)
Frame = +3
Query: 603 PPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSPXXPP--- 773
PP P P PP G G G + P P PG F P P P
Sbjct: 194 PPTPPPTPRGFPPPLPSPGAGAPRGG----SATPAMIPGHPGAFYPFPPPSLPGVGPPRG 249
Query: 774 GGXTXGFPPXXP 809
GG G P P
Sbjct: 250 GGAIPGLPAGFP 261
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +2
Query: 581 PPXPXXXXXXXXXXPXXXXPPXXPXGXGXXGXWGPPXRFXPPXTPXGPR 727
PP P P P P G G GPP PP P GPR
Sbjct: 350 PPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPP----PPALPGGPR 394
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = +2
Query: 638 PPXXPXGXGXXGXWGPPXRFXPPXTPXGPRXXXVG-XQXGFPXXSXRGGNXGFPPXTPRG 814
PP P GPP PP P PR G P + RGG PP P G
Sbjct: 334 PPPAPSPSAAGAGSGPPPP-PPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGG 392
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/62 (29%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Frame = +3
Query: 591 PXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXP-GXFXLXXXPVSPXX 767
P PPPP PP G G PP P P G P P
Sbjct: 635 PPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPP 694
Query: 768 PP 773
PP
Sbjct: 695 PP 696
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 622 PXXXXPPPXXXGGRXXXXLGXPLPXPPPXDXPXXPXXSGWXPXRFPP 762
P PPP G + P P PPP P S P PP
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPP 591
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/79 (27%), Positives = 26/79 (32%), Gaps = 1/79 (1%)
Frame = +3
Query: 576 LXPXXPXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPV 755
L P P PPPP P PP PP S P P P + P+
Sbjct: 1160 LPPSPPPATPPPPPPLSPSLPPPPP----------PPPLPSGPPPQPAPP-PLPIQPPPI 1208
Query: 756 SPXXPPGG-XTXGFPPXXP 809
P P + G+ P P
Sbjct: 1209 PPPPVPSSPSSLGYQPPAP 1227
>12_02_1122 - 26244667-26245299
Length = 210
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 791 TPSXPPGXXXGGNRXGXQPEXXGXXGXSXGGGXG 690
+PS PPG GG G G + GGG G
Sbjct: 36 SPSIPPGRGGGGGTSGGDNNRGSRGGGNGGGGGG 69
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +3
Query: 582 PXXPXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSP 761
P P PPPP P PP PP P P P L PV
Sbjct: 1145 PPPPEKSPPPPAP-VILPPPPIKSPPPPAPVISPPP----PVKSPPPPAPVILPPPPVKS 1199
Query: 762 XXPPGGXTXGFPP 800
PP PP
Sbjct: 1200 PPPPAPVISPPPP 1212
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/83 (24%), Positives = 22/83 (26%), Gaps = 1/83 (1%)
Frame = +3
Query: 576 LXPXXPXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXP-XXPGXFXLXXXP 752
+ P P PPPP P P P S P P P P
Sbjct: 1223 ILPPPPVKSPPPPAPVISPPPPEKSPPPAAPVILSPPAVKSLPPPAPVSLPPPPVKSLPP 1282
Query: 753 VSPXXPPGGXTXGFPPXXPGDXP 821
+P P PP P P
Sbjct: 1283 PAPVSLPPPVVKSLPPPAPVSLP 1305
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/82 (24%), Positives = 22/82 (26%)
Frame = +3
Query: 582 PXXPXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSP 761
P P PPP P PP G PP P P + P
Sbjct: 265 PRPPPPQVPPPPPQAPPPPPPNAPMGMPPRI--PPPPVGGTQPPPPPPPLANGPPRSIPP 322
Query: 762 XXPPGGXTXGFPPXXPGDXPXE 827
GG F P P P +
Sbjct: 323 PPMTGGAMANFTPGAPPRPPMQ 344
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/75 (26%), Positives = 22/75 (29%), Gaps = 3/75 (4%)
Frame = +3
Query: 582 PXXPXXXPPPPXPXXXXXXPPXXXR---GXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXP 752
P P PPPP P PP G PP + P P
Sbjct: 273 PPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANGPPRSIPPPPMTGGAMAN 332
Query: 753 VSPXXPPGGXTXGFP 797
+P PP GFP
Sbjct: 333 FTPGAPPRPPMQGFP 347
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 6.8
Identities = 24/87 (27%), Positives = 24/87 (27%), Gaps = 7/87 (8%)
Frame = +3
Query: 582 PXXPXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSP 761
P P PPPP P PP PP S P P P P
Sbjct: 153 PPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPP--SPPPPPPTRPPSVKPPVVQPKP 210
Query: 762 XXPPGGXTXG-------FPPXXPGDXP 821
PP PP PGD P
Sbjct: 211 QPPPTLPPPSPPPPPPTVPPRTPGDTP 237
>11_01_0359 - 2731522-2732346
Length = 274
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/44 (29%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +1
Query: 637 PPPXXXGGRXXXXLGXPLPXPPP--XDXPXXPXXSGWXPXRFPP 762
PPP G + P P PPP P P + +PP
Sbjct: 24 PPPAATNGTAAFAVAYPYPAPPPHSHSHPPPPPPHAYHHHHYPP 67
>07_01_0479 + 3606663-3607448
Length = 261
Score = 28.7 bits (61), Expect = 6.8
Identities = 22/74 (29%), Positives = 23/74 (31%)
Frame = +3
Query: 591 PXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSPXXP 770
P PP P PP G G PP P P PG + P P
Sbjct: 186 PFQRPPGVPPAFPGGPPPPP----GPFMRGPPPM-GPPQVRPGMPGG---PPPGMRPGMP 237
Query: 771 PGGXTXGFPPXXPG 812
P G PP PG
Sbjct: 238 PPPFRPGMPPPPPG 251
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 773 GXXXGGNRXGXQPEXXGXXGXSXGGGXGRGXPXXXXXLPP 654
G GG R G G G S GGG G G P PP
Sbjct: 570 GGYSGGGRGGGYSRG-GRGGYSGGGGGGGGDPYRASAPPP 608
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/77 (24%), Positives = 20/77 (25%)
Frame = +3
Query: 591 PXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSPXXP 770
P PP P PP PP + P P P P P P
Sbjct: 33 PEAEASPPSPPTEASPPPLAP--PPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPP 90
Query: 771 PGGXTXGFPPXXPGDXP 821
P PP P P
Sbjct: 91 PPPPPAASPPPPPPSPP 107
>01_06_0383 - 28903620-28904077,28904172-28904259
Length = 181
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -1
Query: 819 GXPRGVXGGN-PXXPPRXEXXGKPXWXPTXXXRGP 718
G P GV GG P PP P W + +GP
Sbjct: 107 GGPAGVVGGRRPSAPPAPRGRSPPHWVRSSDQQGP 141
>11_06_0188 +
21036465-21036627,21036735-21036883,21037369-21037484,
21037939-21038101
Length = 196
Score = 28.3 bits (60), Expect = 9.0
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = -2
Query: 779 PPGXXXGGNRXGXQPEXXGXXGXSXGGGX-GRGXPXXXXXLPPXXXGGGXXXXG 621
P G GG R G + G GGG GRG P PP G G G
Sbjct: 142 PKGQSQGGGRGGGRGGGRGGFRGRGGGGFRGRGAPRGRGG-PPRGGGRGFRGRG 194
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 622 PXXXXPPPXXXGGRXXXXLGXPLPXPPPXDXPXXPXXSGWXPXRF 756
P PPP R P PPP P SGW P R+
Sbjct: 267 PPPPPPPPPPMPPRTDNASTQAAPAPPPP-LPRAGNGSGWLPRRY 310
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 134 LVEPADILLKQRSLFA*YAKXCTNRPFFHISVTHRRRLNSQPVI 265
L E +I+ +QRS + N FFH T RRR N V+
Sbjct: 53 LFEREEIMARQRSRVDWLREGDRNTAFFHARATARRRTNKITVL 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,404,602
Number of Sequences: 37544
Number of extensions: 468845
Number of successful extensions: 2170
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1836
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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