Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_F06
(912 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39997-7|AAA81099.2| 147|Caenorhabditis elegans Hypothetical pr... 114 7e-26
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 42 8e-04
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 42 8e-04
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 42 8e-04
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 35 0.093
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 35 0.093
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 33 0.21
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 33 0.21
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.49
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 32 0.49
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 32 0.49
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 1.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 1.5
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 1.5
AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen prot... 30 2.0
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.0
Z72507-3|CAA96625.1| 337|Caenorhabditis elegans Hypothetical pr... 30 2.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.6
AF016419-8|AAG24053.1| 293|Caenorhabditis elegans Serpentine re... 30 2.6
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 3.5
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 3.5
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 3.5
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 3.5
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 3.5
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 3.5
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 29 3.5
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 3.5
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 3.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 29 4.6
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 29 6.1
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 6.1
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 29 6.1
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 29 6.1
AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered cu... 29 6.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.1
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 8.1
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 28 8.1
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 28 8.1
M32877-1|AAA28001.1| 669|Caenorhabditis elegans daf-1 protein. 28 8.1
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 28 8.1
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 8.1
AF067616-10|AAC19189.2| 668|Caenorhabditis elegans Abnormal dau... 28 8.1
AF067616-9|AAP82657.1| 669|Caenorhabditis elegans Abnormal daue... 28 8.1
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 8.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.1
>U39997-7|AAA81099.2| 147|Caenorhabditis elegans Hypothetical
protein F56D1.3 protein.
Length = 147
Score = 114 bits (275), Expect = 7e-26
Identities = 58/117 (49%), Positives = 78/117 (66%), Gaps = 9/117 (7%)
Frame = +2
Query: 197 CTNRPFFHISVTHRRRLNSQ---PVIEQLGSYDPMPNINNEKLVALNLERLKYWLG-KGA 364
CTNRPF+H+ V R L + ++EQ+G++DP+PN NEKLVALN RLKYW+G + A
Sbjct: 22 CTNRPFYHVCVFPDRALGRRYEGNILEQVGTFDPLPNQKNEKLVALNFGRLKYWIGERNA 81
Query: 365 HVSTPVSELLGLSGFFPIHPRTYMTAWRNR-----QQERENLAKQEAENAKEQTATT 520
H+S PV ELLGLSG FPIHP++++ A NR QQ + EAE ++ A+T
Sbjct: 82 HISVPVLELLGLSGLFPIHPKSFIRAKDNRALIADQQLKVAAEAAEAEKVAQEQAST 138
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 41.5 bits (93), Expect = 8e-04
Identities = 26/82 (31%), Positives = 28/82 (34%)
Frame = +3
Query: 567 NSXLXPXXPXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXX 746
+S L P PPP P PP G G PP P P G +
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPPPPPPPG------GLPPITGGPPPPPPPGGLPPISG 756
Query: 747 XPVSPXXPPGGXTXGFPPXXPG 812
P P PPGG PP PG
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPG 778
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = +3
Query: 591 PXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSPXXP 770
P PPP P P G PP P P PG P P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG----CPPPPPPPP 776
Query: 771 PGGXTXGFPPXXP 809
PGG G PP P
Sbjct: 777 PGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 41.5 bits (93), Expect = 8e-04
Identities = 26/82 (31%), Positives = 28/82 (34%)
Frame = +3
Query: 567 NSXLXPXXPXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXX 746
+S L P PPP P PP G G PP P P G +
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPPPPPPPG------GLPPITGGPPPPPPPGGLPPISG 756
Query: 747 XPVSPXXPPGGXTXGFPPXXPG 812
P P PPGG PP PG
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPG 778
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = +3
Query: 591 PXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSPXXP 770
P PPP P P G PP P P PG P P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG----CPPPPPPPP 776
Query: 771 PGGXTXGFPPXXP 809
PGG G PP P
Sbjct: 777 PGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 41.5 bits (93), Expect = 8e-04
Identities = 26/82 (31%), Positives = 28/82 (34%)
Frame = +3
Query: 567 NSXLXPXXPXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXX 746
+S L P PPP P PP G G PP P P G +
Sbjct: 286 SSALPPITGGPPPPPGLPPITGGPPPPPPPG------GLPPITGGPPPPPPPGGLPPISG 339
Query: 747 XPVSPXXPPGGXTXGFPPXXPG 812
P P PPGG PP PG
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPG 361
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = +3
Query: 591 PXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSPXXP 770
P PPP P P G PP P P PG P P P
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG----CPPPPPPPP 359
Query: 771 PGGXTXGFPPXXP 809
PGG G PP P
Sbjct: 360 PGGFKGGPPPPPP 372
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 34.7 bits (76), Expect = 0.093
Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Frame = -1
Query: 825 PXGXPRGVXGGNPXXPPRXEXX---GKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXP 655
P G P P PP G+P RGP GV G + G P P P P
Sbjct: 192 PNGHPGKPGSQGPPGPPGHSDEPKPGQPGQPGRAGPRGPRGVAGIKGKDGAPGSPGQPGP 251
Query: 654 XGXXG 640
G G
Sbjct: 252 RGGPG 256
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/77 (27%), Positives = 21/77 (27%)
Frame = +3
Query: 582 PXXPXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSP 761
P P PP P P G PP P P PG P P
Sbjct: 137 PCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQPG----QPGPHGP 192
Query: 762 XXPPGGXTXGFPPXXPG 812
PG PP PG
Sbjct: 193 NGHPGKPGSQGPPGPPG 209
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -1
Query: 789 PXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
P PP G P GP G G GGP P P P G G
Sbjct: 147 PACPPGPP--GAPGAPGKPGSEGPPGPPGHDGPNGGPGQPGQPGPHGPNG 194
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 34.7 bits (76), Expect = 0.093
Identities = 25/84 (29%), Positives = 25/84 (29%), Gaps = 4/84 (4%)
Frame = +3
Query: 582 PXXPXXXPP---PPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXP 752
P P PP PP P PP G PP P P P P
Sbjct: 454 PFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPG--PFNPSGAPPSGGP 511
Query: 753 VSPXXPPGGXTXGFPP-XXPGDXP 821
P P G G PP P D P
Sbjct: 512 PGPFDPSGAPPSGMPPVPLPTDLP 535
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 33.5 bits (73), Expect = 0.21
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +2
Query: 623 PXXXXPPXXPXGXGXXGXWGP---PXRFXPPXTPXGPRXXXVGXQXGFPXXSXRGGNXGF 793
P P P G G G P PP P P + Q G P S GG GF
Sbjct: 196 PGLNGQPGLPGGMGPPGQSMSNVLPGPLGPPGPPGQPGNHGLAGQPGSPGQSVLGGIVGF 255
Query: 794 PPXTPRGXP 820
P G P
Sbjct: 256 AAPGPMGPP 264
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 33.5 bits (73), Expect = 0.21
Identities = 24/67 (35%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
Frame = +2
Query: 623 PXXXXPPXXPXGXGXXGXWGPPXRFXPPXTPXGPRXXXVGXQXGFPXXSXRGGNXGFP-P 799
P P P G G G R PP P GP G G P GN G P P
Sbjct: 147 PGRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDGGRP------GNPGRPGP 200
Query: 800 XTPRGXP 820
PRG P
Sbjct: 201 AGPRGEP 207
Score = 31.9 bits (69), Expect = 0.65
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = -1
Query: 813 PRGVXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
P G GG P P G+P GP G G + G P P P P G G
Sbjct: 173 PPGPPGG-PGGPGEGGDGGRPGNPGRPGPAGPRGEPGTEYKPGQPGRPGPPGPRGEAG 229
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.3 bits (70), Expect = 0.49
Identities = 22/73 (30%), Positives = 22/73 (30%), Gaps = 4/73 (5%)
Frame = +3
Query: 603 PPPPXPXXXXXXP----PXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSPXXP 770
PPPP P P P G PP P P G P P P
Sbjct: 489 PPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGA------PTPPPPP 542
Query: 771 PGGXTXGFPPXXP 809
P G G PP P
Sbjct: 543 PVGMANGGPPPPP 555
Score = 25.8 bits (54), Expect(2) = 5.0
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 637 PPPXXXGGRXXXXLGXPLPXPPP 705
PPP G G P P PPP
Sbjct: 520 PPPPPMPGMAPLSTGAPTPPPPP 542
Score = 21.4 bits (43), Expect(2) = 5.0
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +1
Query: 691 PXPPPXDXPXXPXXSGWXPXRFPP 762
P PPP P +G P F P
Sbjct: 576 PPPPPPPPPPSFMFNGKVPNAFSP 599
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 32.3 bits (70), Expect = 0.49
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = -1
Query: 813 PRGVXG--GNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
PRG G G P P R G+P T GP G G R G P P P G G
Sbjct: 238 PRGPPGIPGAPGQPGRPGPPGEPGTYKTEV--GPAGRAGAPGRPGPPGQPGPAGPPGENG 295
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 32.3 bits (70), Expect = 0.49
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = -1
Query: 813 PRGVXG--GNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
PRG G G P P R G+P T GP G G R G P P P G G
Sbjct: 219 PRGPPGIPGAPGQPGRPGPPGEPGTYKTEV--GPAGRAGAPGRPGPPGQPGPAGPPGENG 276
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = +3
Query: 603 PPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSPXXPPGGX 782
P PP P PP G PP S P P P P PP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Query: 783 TXGFPPXXPGDXP 821
F P G P
Sbjct: 322 PSRFGPPGMGGMP 334
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Frame = +3
Query: 591 PXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXL-XXXPVSPXX 767
P P PP P PP G PP P P PG + P S
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWP-----PPPPPPPGRTPGPPGMPGMPPPPPPSRFG 326
Query: 768 PPGGXTXGFPPXXP 809
PPG G PP P
Sbjct: 327 PPG--MGGMPPPPP 338
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/74 (27%), Positives = 21/74 (28%), Gaps = 1/74 (1%)
Frame = +3
Query: 603 PPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXP-XXPGXFXLXXXPVSPXXPPGG 779
PPPP PP G G P P PG + P PGG
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Query: 780 XTXGFPPXXPGDXP 821
PP P P
Sbjct: 347 MPPPPPPRYPSAGP 360
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 637 PPPXXXGGRXXXXLGXPLPXPPPXDXPXXPXXSGWXPXRFPP 762
PPP GR G P PPP P G P PP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = +3
Query: 603 PPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXLXXXPVSPXXPPGGX 782
P PP P PP G PP S P P P P PP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Query: 783 TXGFPPXXPGDXP 821
F P G P
Sbjct: 332 PSRFGPPGMGGMP 344
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Frame = +3
Query: 591 PXXXPPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXPXXPGXFXL-XXXPVSPXX 767
P P PP P PP G PP P P PG + P S
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWP-----PPPPPPPGRTPGPPGMPGMPPPPPPSRFG 336
Query: 768 PPGGXTXGFPPXXP 809
PPG G PP P
Sbjct: 337 PPG--MGGMPPPPP 348
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/74 (27%), Positives = 21/74 (28%), Gaps = 1/74 (1%)
Frame = +3
Query: 603 PPPPXPXXXXXXPPXXXRGXGXXXXGXPPXXSXPXXXP-XXPGXFXLXXXPVSPXXPPGG 779
PPPP PP G G P P PG + P PGG
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Query: 780 XTXGFPPXXPGDXP 821
PP P P
Sbjct: 357 MPPPPPPRYPSAGP 370
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 637 PPPXXXGGRXXXXLGXPLPXPPPXDXPXXPXXSGWXPXRFPP 762
PPP GR G P PPP P G P PP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 638 PPXXPXGXGXXGXWGPPXRFXPPXTPXG 721
PP P G G G GPP PP P G
Sbjct: 627 PPRGPGGGGGGGPTGPPAPPKPPAKPRG 654
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 638 PPXXPXGXGXXGXWGPPXRFXPPXTPXG 721
PP P G G G GPP PP P G
Sbjct: 627 PPRGPGGGGGGGPTGPPAPPKPPAKPRG 654
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = +2
Query: 650 PXGXGXXGXWGPPXRFXPPXTPXGPRXXXVGXQ--XGFPXXSXRGGNXGFP-PXTPRGXP 820
P G G GPP PP P P G Q G P GN G P P G P
Sbjct: 252 PGTPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPPGQP 311
>AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen protein
72 protein.
Length = 205
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -1
Query: 789 PXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
P PP G P W GP G GG GGP P G G
Sbjct: 129 PNGPPGQN--GPPGWAGRDGNIGPQGTPGGRGEPGGPGTDGFPGFAGNPG 176
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/70 (31%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Frame = -2
Query: 779 PPGXXXGGNRXGXQPEXXGXXGXSXGGGXGR---GXPXXXXXLPPXXXGGGXXXXGXXXX 609
PP GG G P G G S GGG GR G GGG G
Sbjct: 314 PPRTPAGGGGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAA 373
Query: 608 XXXXXXGXGG 579
G GG
Sbjct: 374 GGGYNAGGGG 383
>Z72507-3|CAA96625.1| 337|Caenorhabditis elegans Hypothetical
protein F17C11.3 protein.
Length = 337
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = -1
Query: 810 RGVXG--GNPXXPPRXEXXGKPXWXPTXXXRGPXGVXG--GXXRXGGPQXPXXPXPXGXX 643
+GV G G P + G+P T RG G+ G G GGP P P P G
Sbjct: 248 QGVKGAMGQPGNEGQPGKKGRPGLPGTEGIRGYEGMSGLRGIEGVGGPPGP--PGPQGTI 305
Query: 642 GG 637
GG
Sbjct: 306 GG 307
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -1
Query: 819 GXPRGVXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXG 649
G PRG GG P G P G G+ G GGP P P G
Sbjct: 162 GDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 218
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -1
Query: 819 GXPRGVXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXG 649
G PRG GG P G P G G+ G GGP P P G
Sbjct: 442 GDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 498
>AF016419-8|AAG24053.1| 293|Caenorhabditis elegans Serpentine
receptor, class x protein6 protein.
Length = 293
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -1
Query: 552 IYXFNVSI*IYVVAVCSLAFSASCLARFSLSCCLFL 445
I+ F +I I+++ + +FSA+C+ F L CC+ +
Sbjct: 104 IFTFQRTIFIFIILITLTSFSAACIQYF-LPCCVLI 138
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = -1
Query: 819 GXPRGVXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P G GGN P G P W G G+ G R G P P P P G G
Sbjct: 99 GFP-GNDGGN-GRPGEPGPPGAPGWDGCNGTDGAPGIPG---RPGPPGMPGFPGPPGMDG 153
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = -1
Query: 825 PXGXPRG--VXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPX 652
P G P G G P P G P T G G G GGP P P
Sbjct: 354 PPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNE 413
Query: 651 GXXG 640
G G
Sbjct: 414 GLPG 417
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = -1
Query: 819 GXPRGVXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P G GGN P G P W G G+ G R G P P P P G G
Sbjct: 99 GFP-GNDGGN-GRPGEPGPPGAPGWDGCNGTDGAPGIPG---RPGPPGMPGFPGPPGMDG 153
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = -1
Query: 825 PXGXPRG--VXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPX 652
P G P G G P P G P T G G G GGP P P
Sbjct: 353 PPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNE 412
Query: 651 GXXG 640
G G
Sbjct: 413 GLPG 416
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = -1
Query: 819 GXPRGVXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P G GGN P G P W G G+ G R G P P P P G G
Sbjct: 99 GFP-GNDGGN-GRPGEPGPPGAPGWDGCNGTDGAPGIPG---RPGPPGMPGFPGPPGMDG 153
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = -1
Query: 825 PXGXPRG--VXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPX 652
P G P G G P P G P T G G G GGP P P
Sbjct: 353 PPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNE 412
Query: 651 GXXG 640
G G
Sbjct: 413 GLPG 416
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = -1
Query: 819 GXPRGVXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P G GGN P G P W G G+ G R G P P P P G G
Sbjct: 99 GFP-GNDGGN-GRPGEPGPPGAPGWDGCNGTDGAPGIPG---RPGPPGMPGFPGPPGMDG 153
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = -1
Query: 825 PXGXPRG--VXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPX 652
P G P G G P P G P T G G G GGP P P
Sbjct: 354 PPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNE 413
Query: 651 GXXG 640
G G
Sbjct: 414 GLPG 417
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = -1
Query: 819 GXPRGVXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P G GGN P G P W G G+ G R G P P P P G G
Sbjct: 99 GFP-GNDGGN-GRPGEPGPPGAPGWDGCNGTDGAPGIPG---RPGPPGMPGFPGPPGMDG 153
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = -1
Query: 825 PXGXPRG--VXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPX 652
P G P G G P P G P T G G G GGP P P
Sbjct: 390 PPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNE 449
Query: 651 GXXG 640
G G
Sbjct: 450 GLPG 453
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +2
Query: 638 PPXXPXGXGXXGXWGPPXRFXPPXTPXGPRXXXVGXQXGFPXXSXRGGNXGFPP 799
P P G G GPP + P P P G P S GN G P
Sbjct: 238 PSGAPGAPGGPGYPGPPGQKGPSGAPGQPGSDGNPGAPGQPGQSGGSGNRGICP 291
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -1
Query: 759 GKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P +GP G G R GG P P P G G
Sbjct: 174 GPPGPSGAPGQKGPSGAPGQPGRSGGASLPGPPGPAGPPG 213
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = -1
Query: 813 PRGVXG--GNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
P G G G P P G+P RGP G G G P P P G G
Sbjct: 135 PAGAPGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPG 194
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = -1
Query: 813 PRGVXG--GNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
P G G G P P G+P RGP G G G P P P G G
Sbjct: 135 PAGAPGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPG 194
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = -2
Query: 773 GXXXGGNRXGXQPEXXGXXGXSXGGGXGRGXPXXXXXLPPXXXGGGXXXXGXXXXXXXXX 594
G GG G G G GGG G G PP GGG G
Sbjct: 77 GGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPP-PPPACGGGCGGGGGGCGGGCGG 135
Query: 593 XGXGG 579
G GG
Sbjct: 136 GGGGG 140
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = -3
Query: 775 PGGXXGETGLXXNXXXPGXXGXXXGXEXXGGXPXXXXPXPRXXXGGXXXXXXGXGGGGXX 596
P G G G G G G GG P P GG G GGGG
Sbjct: 21 PSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPP--PPPPACGGGCGGGGGGCGGGGGG 78
Query: 595 XGXXG 581
G G
Sbjct: 79 CGGGG 83
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.6
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = -3
Query: 808 GXXGGKPXVXPPGGXXGETGLXXNXXXPGXXGXXXGXEXXGGXPXXXXPXPRXXXGGXXX 629
G GG GG G G P G G GG P P GG
Sbjct: 27 GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGG-GGCAPPPAPCGGGCGG 85
Query: 628 XXXGXGGGGXXXGXXG 581
G GGGG G G
Sbjct: 86 GGGGCGGGGGGCGGGG 101
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.6
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = -3
Query: 808 GXXGGKPXVXPPGGXXGETGLXXNXXXPGXXGXXXGXEXXGGXPXXXXPXPRXXXGGXXX 629
G GG GG G G P G G GG P P GG
Sbjct: 27 GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGG-GGCAPPPAPCGGGCGG 85
Query: 628 XXXGXGGGGXXXGXXG 581
G GGGG G G
Sbjct: 86 GGGGCGGGGGGCGGGG 101
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -1
Query: 759 GKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P RGP G+ G R G P P P G G
Sbjct: 146 GPPGLPGPKGPRGPAGIEGKPGRLGEDNRPGPPGPPGVRG 185
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -1
Query: 759 GKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P +GP G G + GG P P P G G
Sbjct: 177 GPPGPSGAPGQKGPSGAPGAPGQSGGASLPGPPGPAGPPG 216
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = -1
Query: 819 GXPRGVXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P P PP G+P T GP G G + G P P P G G
Sbjct: 219 GEPGSTGEPGPVGPPGPS--GQPGNDGTPGQPGPKGPPGPDGKPGADGNPGQPGPVGPPG 276
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = -1
Query: 819 GXPRGVXGGNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P P PP G+P T GP G G + G P P P G G
Sbjct: 219 GEPGSTGEPGPVGPPGPS--GQPGNDGTPGQPGPKGPPGPDGKPGADGNPGQPGPVGPPG 276
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Frame = +2
Query: 623 PXXXXPPXXPXGXGXXGXWGPPXRFXPPXTPXGPRXXXVGXQXGF--PXXSXRGGNXGFP 796
P P P G G GPP PP P P + Q G + R G G P
Sbjct: 153 PGDIGQPGNPGERGMDGEPGPPGPTGPPGEPGLPGAQGITGQPGVNAEPVAYRAGAPG-P 211
Query: 797 PXTPRGXP 820
P P G P
Sbjct: 212 PGEP-GPP 218
>AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered
cuticle protein 2 protein.
Length = 311
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = -1
Query: 795 GNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P P G P +GP G G + G P P P P G G
Sbjct: 243 GPPGLPGPDGLPGTPGNPGQDGEQGPAGEPGRDGKDGQPGRPGQPGPPGEPG 294
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/46 (28%), Positives = 16/46 (34%)
Frame = +1
Query: 580 PPXPXXXXXXXXXXPXXXXPPPXXXGGRXXXXLGXPLPXPPPXDXP 717
PP P P PPP + + P+P PPP P
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSP 1385
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -1
Query: 759 GKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P +GP G G + GG P P P G G
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPG 215
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -1
Query: 759 GKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P +GP G G + GG P P P G G
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPG 215
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = +2
Query: 623 PXXXXPPXXPXGXGXXGXWGPPXRFXPPXTPXGPRXXXVGXQXGFPXXSXRGGNXGFPPX 802
P P P G G GPP PP P Q G S GG G P
Sbjct: 182 PGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQDG---ASSAGGEAGPGPA 238
Query: 803 TPRGXPXG 826
P G P G
Sbjct: 239 GPPG-PAG 245
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 773 GXXXGGNRXGXQPEXXGXXGXSXGGGXGRG 684
G GG++ G + G G + GGG GRG
Sbjct: 172 GSQDGGSQGGWGGQNGGGQGGNQGGGGGRG 201
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -1
Query: 759 GKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P +GP G G + GG P P P G G
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPG 215
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -1
Query: 759 GKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P +GP G G + GG P P P G G
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPG 215
>M32877-1|AAA28001.1| 669|Caenorhabditis elegans daf-1 protein.
Length = 669
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 343 VLAWEGCSRIDPGFRTSWTLRIFPHTSSNLHDCL 444
VL + G R+D GF T L H S +LHD L
Sbjct: 347 VLRYIGSDRVDTGFVTELWLVTEYHPSGSLHDFL 380
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -1
Query: 759 GKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXGXXG 640
G P +GP G G + GG P P P G G
Sbjct: 211 GPPGPSGAPGQKGPSGAPGAPGQSGGSALPGPPGPAGSPG 250
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -2
Query: 761 GGNRXGXQPEXXGXXGXSXGGGXGR--GXPXXXXXLPPXXXGGG 636
GGN G G G + GGG GR G PP GGG
Sbjct: 112 GGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGG 155
>AF067616-10|AAC19189.2| 668|Caenorhabditis elegans Abnormal dauer
formation protein1, isoform b protein.
Length = 668
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 343 VLAWEGCSRIDPGFRTSWTLRIFPHTSSNLHDCL 444
VL + G R+D GF T L H S +LHD L
Sbjct: 347 VLRYIGSDRVDTGFVTELWLVTEYHPSGSLHDFL 380
>AF067616-9|AAP82657.1| 669|Caenorhabditis elegans Abnormal dauer
formation protein1, isoform a protein.
Length = 669
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 343 VLAWEGCSRIDPGFRTSWTLRIFPHTSSNLHDCL 444
VL + G R+D GF T L H S +LHD L
Sbjct: 347 VLRYIGSDRVDTGFVTELWLVTEYHPSGSLHDFL 380
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 795 GNPXXPPRXEXXGKPXWXPTXXXRGPXGVXGGXXRXGGPQXPXXPXPXG 649
G P P G P T G G GG GGP P P G
Sbjct: 101 GGPGNPGGPGGLGTPGGPGTPGGPGNPGGLGGPGNPGGPGTPGGPGTPG 149
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 622 PXXXXPPPXXXGGRXXXXLGXPLPXPPPXDXP 717
P PPP G G P P PPP P
Sbjct: 276 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 622 PXXXXPPPXXXGGRXXXXLGXPLPXPPPXDXP 717
P PPP G G P P PPP P
Sbjct: 297 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 622 PXXXXPPPXXXGGRXXXXLGXPLPXPPPXDXP 717
P PPP G G P P PPP P
Sbjct: 282 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,836,414
Number of Sequences: 27780
Number of extensions: 374360
Number of successful extensions: 2325
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1972
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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