Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_F05
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0495 + 9880714-9881196                                           29   6.6  
05_03_0414 + 13650483-13651388,13651559-13651657                       28   8.7  
04_01_0600 + 7907142-7908047,7908218-7908316                           28   8.7  
04_01_0595 + 7840842-7841345,7841518-7841748,7841919-7842017           28   8.7  
02_05_0925 - 32768815-32769654                                         28   8.7  
02_02_0037 - 6260171-6260382,6260657-6260723                           28   8.7  
02_01_0640 + 4796079-4797032,4797269-4797934                           28   8.7  

>09_02_0495 + 9880714-9881196
          Length = 160

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -1

Query: 886 GGGHHXPGGXFXXKXPPPPP 827
           GGG    GG F    PPPPP
Sbjct: 65  GGGDGGAGGLFGGTYPPPPP 84


>05_03_0414 + 13650483-13651388,13651559-13651657
          Length = 334

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/45 (24%), Positives = 24/45 (53%)
 Frame = +3

Query: 192 QTPFSEEDCIRQGGICVRTEECDPDNISTISQFLCPNQAHLGVAC 326
           + P ++   +R  G+ ++   CD + +  ++QFL P  A + + C
Sbjct: 2   ELPVADPGPVRAEGLLLQCPYCDSEAMHKLAQFLLPGLAAVCIDC 46


>04_01_0600 + 7907142-7908047,7908218-7908316
          Length = 334

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/45 (24%), Positives = 24/45 (53%)
 Frame = +3

Query: 192 QTPFSEEDCIRQGGICVRTEECDPDNISTISQFLCPNQAHLGVAC 326
           + P ++   +R  G+ ++   CD + +  ++QFL P  A + + C
Sbjct: 2   ELPVADPGPVRAEGLLLQCPYCDSEAMHKLAQFLLPGLAAVCIDC 46


>04_01_0595 + 7840842-7841345,7841518-7841748,7841919-7842017
          Length = 277

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/45 (24%), Positives = 24/45 (53%)
 Frame = +3

Query: 192 QTPFSEEDCIRQGGICVRTEECDPDNISTISQFLCPNQAHLGVAC 326
           + P ++   +R  G+ ++   CD + +  ++QFL P  A + + C
Sbjct: 2   ELPVADPGPVRAEGLLLQCPYCDSEAMHKLAQFLLPGLAAVCIDC 46


>02_05_0925 - 32768815-32769654
          Length = 279

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 877 HHXPGGXFXXKXPPPPP 827
           HH  GG F    PPPPP
Sbjct: 145 HHHIGGRFDHHPPPPPP 161


>02_02_0037 - 6260171-6260382,6260657-6260723
          Length = 92

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +3

Query: 114 KMKLIQCVFVIVLLMAVTVCSSPLLTQTPFSEEDCIRQGGICVRTEECD 260
           K+     V V++L++A  +    ++ Q    E+      G+C+R++ CD
Sbjct: 6   KLSSSAVVLVLLLVVATEMTGMVVVVQARLCEKPSSHFKGLCLRSQNCD 54


>02_01_0640 + 4796079-4797032,4797269-4797934
          Length = 539

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 819 SXXGGGGGXXXXKXPPGXWWPP 884
           S  GGGGG    + PPG W  P
Sbjct: 27  SGDGGGGGSGGVRLPPGPWRLP 48


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,203,096
Number of Sequences: 37544
Number of extensions: 333863
Number of successful extensions: 952
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)