Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_F04
         (892 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   1.2  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    24   2.1  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    24   2.1  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   2.8  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    23   3.7  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = +3

Query: 747 PGPPXHXPXXQXAXXPGXPPXXTXXNPPXNPP 842
           PGP         A   G PP  +   PP  PP
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52



 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/37 (29%), Positives = 13/37 (35%)
 Frame = +2

Query: 464 GXXGKPPXPXAPXXPPFXGKQGXPARXRXPXKGPGTP 574
           G  G  P P      P  G    P++   P   PG P
Sbjct: 19  GAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55



 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/26 (34%), Positives = 9/26 (34%)
 Frame = +1

Query: 793 PAPPPXXRPXTPXTTPXXXXPPPXPP 870
           P  P    P  P   P    PP  PP
Sbjct: 31  PQAPQRGSPPNPSQGPPPGGPPGAPP 56


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/50 (26%), Positives = 15/50 (30%), Gaps = 1/50 (2%)
 Frame = +1

Query: 730 RPXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           +P A P       +      HP       P   P        P P PPHP
Sbjct: 36  KPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 85



 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/49 (26%), Positives = 15/49 (30%), Gaps = 1/49 (2%)
 Frame = +1

Query: 733 PXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           P A P       +      HP      +P   P        P P PPHP
Sbjct: 233 PEAEPGNNRPVYIPQPRPPHPRLRREAKPEAKPGNNRPVYIPQPRPPHP 281



 Score = 23.0 bits (47), Expect = 3.7
 Identities = 13/49 (26%), Positives = 14/49 (28%), Gaps = 1/49 (2%)
 Frame = +1

Query: 733 PXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           P A P       +      HP       P   P        P P PPHP
Sbjct: 177 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 225



 Score = 23.0 bits (47), Expect = 3.7
 Identities = 13/49 (26%), Positives = 14/49 (28%), Gaps = 1/49 (2%)
 Frame = +1

Query: 733 PXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           P A P       +      HP       P   P        P P PPHP
Sbjct: 205 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 253


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/50 (26%), Positives = 15/50 (30%), Gaps = 1/50 (2%)
 Frame = +1

Query: 730 RPXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           +P A P       +      HP       P   P        P P PPHP
Sbjct: 8   KPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 57



 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/49 (26%), Positives = 15/49 (30%), Gaps = 1/49 (2%)
 Frame = +1

Query: 733 PXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           P A P       +      HP      +P   P        P P PPHP
Sbjct: 121 PEAEPGNNRPVYIPQPRPPHPRLRREAKPEAEPGNNRPVYIPQPRPPHP 169



 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/50 (26%), Positives = 15/50 (30%), Gaps = 1/50 (2%)
 Frame = +1

Query: 730 RPXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           +P A P       +      HP       P   P        P P PPHP
Sbjct: 148 KPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 197



 Score = 23.0 bits (47), Expect = 3.7
 Identities = 13/49 (26%), Positives = 14/49 (28%), Gaps = 1/49 (2%)
 Frame = +1

Query: 733 PXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           P A P       +      HP       P   P        P P PPHP
Sbjct: 37  PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 85



 Score = 23.0 bits (47), Expect = 3.7
 Identities = 13/49 (26%), Positives = 14/49 (28%), Gaps = 1/49 (2%)
 Frame = +1

Query: 733 PXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           P A P       +      HP       P   P        P P PPHP
Sbjct: 65  PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 113



 Score = 23.0 bits (47), Expect = 3.7
 Identities = 13/49 (26%), Positives = 14/49 (28%), Gaps = 1/49 (2%)
 Frame = +1

Query: 733 PXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           P A P       +      HP       P   P        P P PPHP
Sbjct: 93  PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 141


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 13/50 (26%), Positives = 15/50 (30%), Gaps = 1/50 (2%)
 Frame = +1

Query: 730 RPXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           +P A P       +      HP       P   P        P P PPHP
Sbjct: 37  KPEAEPGNNRPIYIPQPRPPHPRLRREAEPKAEPGNNRPIYIPQPRPPHP 86



 Score = 21.8 bits (44), Expect = 8.6
 Identities = 15/49 (30%), Positives = 16/49 (32%)
 Frame = +1

Query: 730 RPXAXPPGRPXTXLXXKXXXHPAPPPXXRPXTPXTTPXXXXPPPXPPHP 876
           RP   P  RP      +     A P   RP           P P PPHP
Sbjct: 74  RPIYIPQPRPPHPRLRREAESEAEPGNNRPV--------YIPQPRPPHP 114


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 13/49 (26%), Positives = 14/49 (28%), Gaps = 1/49 (2%)
 Frame = +1

Query: 733 PXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           P A P       +      HP       P   P        P P PPHP
Sbjct: 38  PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 86



 Score = 23.0 bits (47), Expect = 3.7
 Identities = 13/49 (26%), Positives = 14/49 (28%), Gaps = 1/49 (2%)
 Frame = +1

Query: 733 PXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           P A P       +      HP       P   P        P P PPHP
Sbjct: 66  PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 114



 Score = 23.0 bits (47), Expect = 3.7
 Identities = 13/49 (26%), Positives = 14/49 (28%), Gaps = 1/49 (2%)
 Frame = +1

Query: 733 PXAXPPGRPXTXLXXKXXXHPAPPPXXRPXT-PXTTPXXXXPPPXPPHP 876
           P A P       +      HP       P   P        P P PPHP
Sbjct: 94  PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 142


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,979
Number of Sequences: 438
Number of extensions: 3177
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)