Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_F01
(835 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 98 2e-21
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 94 2e-20
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 63 4e-11
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 63 4e-11
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 60 4e-10
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 29 0.81
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 28 1.9
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 27 3.3
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 7.6
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 7.6
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 7.6
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 26 7.6
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 97.9 bits (233), Expect = 2e-21
Identities = 46/106 (43%), Positives = 60/106 (56%)
Frame = +2
Query: 326 RTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKAD 505
R ++QRG YLA +ETLD GK + + +V +A RYY G AD
Sbjct: 80 RKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRYYGGWAD 139
Query: 506 KILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIXPAL 643
K G TI +D + +T EP+GVCGQIIPWN+P M +WKI PA+
Sbjct: 140 KDYGQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAV 185
Score = 47.6 bits (108), Expect = 2e-06
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 135 KVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRL 314
K ++ LFINN+ VD+V +P E +I +VA+ D+ D+D+AV A+ AF
Sbjct: 17 KTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQ-- 74
Query: 315 FPMAVPWTLLNAA--SYCLS 368
PW ++A CLS
Sbjct: 75 --TDAPWRKFSSAQRGRCLS 92
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 94.3 bits (224), Expect = 2e-20
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Frame = +2
Query: 326 RTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKP-VKQSEEEVYFSASVLRYYAGKA 502
+ + S++G + LA +E +D GKP V + +V + ++LRY AG A
Sbjct: 73 KKVPGSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWA 132
Query: 503 DKILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIXPALXA 649
DKI G IP+ E L + + P+GVCGQI+PWNYP+ M WKI PAL A
Sbjct: 133 DKIYGQVIPTGPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAA 181
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 63.3 bits (147), Expect = 4e-11
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = +2
Query: 401 LAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILGNTIPSDGEVLTF--TMKEPVG 574
L ++ TL+ GKP+ Q+E EV + L++YA +A + G+ PS + F ++K+PVG
Sbjct: 97 LVKMLTLENGKPLSQAEMEVTTCSGYLKWYAAEAVRTFGDVAPSSLQSQNFLISIKQPVG 156
Query: 575 VCGQIIPWNYPIPMMSWKIXPALXAXLPXLTVSSVR 682
V I PWN+P M++ K AL A + + + R
Sbjct: 157 VSALITPWNFPAAMIARKGGAALAAGCTAIFLPAFR 192
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 141 DVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 305
D + + F+ +W+ + + KTF NP +I +VA+ + A++AA +AF
Sbjct: 14 DKSHAQSFVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAF 68
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 63.3 bits (147), Expect = 4e-11
Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +2
Query: 401 LAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILGNT-IPSDGEVLTFTMKEPVGV 577
LA + TL+ GK + ++ EV ++A + ++AG+A +I G++ + S+ + T+K+PVGV
Sbjct: 103 LATMMTLENGKALGDAKGEVVYAAKFIDWFAGEALRISGDSSMSSNPQNRIITIKQPVGV 162
Query: 578 CGQIIPWNYPIPMMSWKIXPALXA 649
G I PWN+P M++ K+ AL A
Sbjct: 163 VGIITPWNFPAAMITRKVGAALAA 186
Score = 29.9 bits (64), Expect = 0.47
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 162 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 305
+I +WV A S KTF NP + V + + A+ A +AF
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAF 74
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 60.1 bits (139), Expect = 4e-10
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +2
Query: 344 QRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADK---IL 514
QRG + LA ++T++CGKP + ++ A + YYA A+ +
Sbjct: 85 QRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVAETDNPTV 144
Query: 515 GNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIXPAL 643
+P++ F + P GV G I PWN+P+ M WK+ PA+
Sbjct: 145 KVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAI 187
Score = 32.3 bits (70), Expect = 0.087
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 159 LFINNEWVDAV--SKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 305
LFI+ ++V + + K P INP E +I A D+D AV A F
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF 73
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 29.1 bits (62), Expect = 0.81
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +2
Query: 386 SQSRYLAELETLDCGKP-VKQSEEEVYFSASVLRYYAGKADKILGNTIPSDGEVLT---- 550
+Q +Y AE+ D GK V + E+ + + + ++ L T +LT
Sbjct: 63 NQDKY-AEIACKDTGKTLVDAAFGEILVTLEKINWTLANGEQSLRPT-KRPNSLLTSYKG 120
Query: 551 -FTMKEPVGVCGQIIPWNYPIPMMSWKIXPALXA 649
+ EP+GV ++ WNYP+ I AL A
Sbjct: 121 GYVKYEPLGVIAALVSWNYPLHNALGPIISALFA 154
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 162 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKAD 269
F+ D S+ TF TI PQ+ + E K+D
Sbjct: 224 FLQQSEADQPSEDTFTTIGPQNSLTVNSTIEKHKSD 259
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 289 AATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLINSLVYLTST 137
+ +A +SA S + TC +S+ G LTA ++++ NS ST
Sbjct: 442 SGSATLVSASSATGTCASYLSAAGSSATNAISLTADSNAVSRNSSASTMST 492
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 7.6
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = -2
Query: 576 TPTGSFMVNVRTSPSEGMVFPNILSAFPA*YLSTLAEKYTSSSDCFTGFPQSKVSSSARY 397
+PT S + +S S F + LS+ S+ + TSSS + S SSS
Sbjct: 299 SPT-STSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSS 357
Query: 396 LDWDSRSSASLSN 358
S+SS+S S+
Sbjct: 358 TTSSSKSSSSFSS 370
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 117 SF*SNRSAYPQAYNTSASNETSKSNLKE 34
SF N+S P + AS ETS++ +KE
Sbjct: 502 SFVPNKSKSPSGTKSPASGETSEAGVKE 529
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 334 HGTAMGNXRWNAFFAAATAKSISALSPSATCVMTVSS 224
+ T + WN+ +AAT S S+ S S + V++V+S
Sbjct: 155 NSTTNSSISWNSSTSAATNTSSSSSSSSQSSVVSVNS 191
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +1
Query: 442 TIRRRSILF-RKRAQIL--RWKSGQDIRKYHSFRRRSPYVHHEGTCRSVRSDN 591
T+ + ++F KR Q L ++K+GQ +R+ + + YV+ E C++ D+
Sbjct: 543 TVHGKIVVFGEKRLQALTEKFKNGQLVRRDYRYWWTPVYVNQELRCKNAYCDS 595
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,693,504
Number of Sequences: 5004
Number of extensions: 55313
Number of successful extensions: 161
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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