Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_F01
(835 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 91 1e-18
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 86 3e-17
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 83 3e-16
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 79 6e-15
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 77 2e-14
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 74 1e-13
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 73 4e-13
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 48 7e-06
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 46 5e-05
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 41 0.001
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 41 0.001
01_05_0543 + 23093519-23093624,23093912-23093934 35 0.069
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 33 0.28
04_04_0844 - 28637393-28638118,28638206-28638283,28638431-286386... 31 1.1
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 29 3.5
04_04_0158 - 23187070-23187264,23187347-23187477,23187550-231877... 29 4.6
12_02_0760 - 22888636-22889407,22889503-22889769,22890001-228903... 29 6.0
06_03_0550 + 22023120-22023422 29 6.0
02_04_0216 + 20986231-20988021 29 6.0
01_05_0402 + 21810906-21811831,21811875-21812472,21813119-21813391 28 8.0
01_01_0135 + 1231687-1232188,1234489-1234564,1234646-1234743,123... 28 8.0
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 90.6 bits (215), Expect = 1e-18
Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = +2
Query: 401 LAELETLDCGKPVKQSEE-EVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGV 577
+A LET D GKP Q+ EV A ++RYYAG ADKI G +P+DG + EP+GV
Sbjct: 150 IAALETWDNGKPYAQAANIEVPMVARLMRYYAGWADKIHGLVVPADGPHHVQVLHEPIGV 209
Query: 578 CGQIIPWNYPIPMMSWKIXPAL 643
GQIIPWN+P+ M +WK+ PAL
Sbjct: 210 AGQIIPWNFPLLMFAWKVGPAL 231
Score = 63.7 bits (148), Expect = 2e-10
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +3
Query: 138 VDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 305
V V YT+L I+ ++VD+ S KTFPT++P+ +I VAEGD DI+ AV AA+KAF
Sbjct: 64 VQVNYTQLLIDGKFVDSASGKTFPTLDPRTGELIAHVAEGDAEDINRAVHAARKAF 119
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 86.2 bits (204), Expect = 3e-17
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +2
Query: 401 LAELETLDCGKPVKQSE-EEVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGV 577
+A LET D GK ++Q+ EV A +RYY G ADKI G +P+DG + EP+GV
Sbjct: 154 IAALETWDGGKTLEQTTGTEVPMVARYMRYYGGWADKIHGLVVPADGPHHVQVLHEPIGV 213
Query: 578 CGQIIPWNYPIPMMSWKIXPAL 643
GQIIPWN+P+ M +WK+ PAL
Sbjct: 214 AGQIIPWNFPLLMFAWKVGPAL 235
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/75 (50%), Positives = 48/75 (64%)
Frame = +3
Query: 138 VDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRLF 317
VDVKYTKL IN +VDA S KTF T++P+ VI +VAEGD D++ AVAAA++AF
Sbjct: 68 VDVKYTKLLINGNFVDAASGKTFATVDPRTGDVIARVAEGDAEDVNRAVAAARRAFDE-- 125
Query: 318 PMAVPWTLLNAASYC 362
PW + A C
Sbjct: 126 ---GPWPRMTAYERC 137
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 82.6 bits (195), Expect = 3e-16
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 332 MDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEE-EVYFSASVLRYYAGKADK 508
M S+RG + LA LE+LD GKP+ + +V +LRY+AG ADK
Sbjct: 104 MSGSERGRVMAKYAEVVERHADELAALESLDAGKPLAAARAVDVGECVGILRYFAGAADK 163
Query: 509 ILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIXPALXA 649
I G T+ ++ +T++EP+GV G I+PWN+P M K+ PAL A
Sbjct: 164 IHGETLKMSRQLQGYTLREPLGVAGLIVPWNFPAIMFFSKVSPALAA 210
Score = 71.7 bits (168), Expect = 7e-13
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +3
Query: 141 DVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 305
+++YTKLFIN +VDA S KTF T +P+ VI +VAEGDK D+DLAV AA++AF
Sbjct: 42 EIRYTKLFINGRFVDAASGKTFETRDPRTGDVIARVAEGDKEDVDLAVKAAREAF 96
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 78.6 bits (185), Expect = 6e-15
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +2
Query: 401 LAELETLDCGKPVKQSE-EEVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGV 577
LA L+T+D GK + ++ A++LRYYAG ADK+ G T+ +T+KEPVGV
Sbjct: 100 LAALDTVDAGKLFAMGKLVDIPGGANLLRYYAGAADKVHGETLKMARPCHGYTLKEPVGV 159
Query: 578 CGQIIPWNYPIPMMSWKIXPALXA 649
G I+PWNYP M +K PAL A
Sbjct: 160 VGHIVPWNYPTTMFFFKASPALAA 183
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +3
Query: 132 VKVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 305
++V V + +L + ++ + KTF T +P+ VI ++AEGDKADIDLAV AA++AF
Sbjct: 12 LQVFVSWKQLKVVDQRFRDLMGKTFETRDPRTGEVIAKIAEGDKADIDLAVKAAREAF 69
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Frame = +2
Query: 332 MDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKI 511
+ A++R S LA L TL+ GKP+K++ EV + AS + Y+A +A +I
Sbjct: 138 LTANERSKALRKWHDLIISHKEELALLMTLEQGKPMKEALVEVTYGASFIEYFAEEAKRI 197
Query: 512 LGNTIP---SDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIXPAL 643
G+ IP SD +L +K+PVGV G + PWN+P+ M++ K+ PAL
Sbjct: 198 YGDIIPPTLSDRRLL--VLKQPVGVVGAVTPWNFPLAMITRKVGPAL 242
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 74.1 bits (174), Expect = 1e-13
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Frame = +2
Query: 398 YLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILGN-----TIPSDGEVLTFTMK 562
YLA LETLD GKP+ ++ ++ A+ YYA A+ + G ++P + ++ +K
Sbjct: 93 YLALLETLDSGKPLDEAAGDMEDVAACFEYYADLAEALDGKQRAPISLPMEN-FESYVLK 151
Query: 563 EPVGVCGQIIPWNYPIPMMSWKIXPALXA 649
EP+GV G I PWNYP+ M +WK+ PAL A
Sbjct: 152 EPIGVVGLITPWNYPLLMATWKVAPALAA 180
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 159 LFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHR 311
LFI W + + P +NP E I + D++LAV+AA+ AF R
Sbjct: 12 LFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGR 62
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 72.5 bits (170), Expect = 4e-13
Identities = 35/65 (53%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +3
Query: 129 MVKVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF- 305
+V ++K+TKLFIN E+VDA S KTF T +P+ V+ +AE DKAD+DLAV AA++AF
Sbjct: 19 LVVPEIKFTKLFINGEFVDAASGKTFKTRDPRTGDVLAHIAEADKADVDLAVKAAREAFE 78
Query: 306 HRLFP 320
H +P
Sbjct: 79 HGKWP 83
Score = 72.1 bits (169), Expect = 5e-13
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 401 LAELETLDCGKPVKQSEE-EVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGV 577
LA L+ D GK + + ++ +A ++RYYAG ADKI G ++ G+ +T++EP+GV
Sbjct: 108 LAALDGADAGKLLTLGKIIDMPAAAQMMRYYAGAADKIHGESLRVAGKYQGYTLREPIGV 167
Query: 578 CGQIIPWNYPIPMMSWKIXPALXA 649
G IIPWN+P M K+ PAL A
Sbjct: 168 VGVIIPWNFPTMMFFLKVSPALAA 191
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 48.4 bits (110), Expect = 7e-06
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 26/109 (23%)
Frame = +2
Query: 401 LAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKI-----LGNTIPSDGEVLTFTMKE 565
LA LETLDCGKP+ ++ ++ A Y+A A+ + ++P + + KE
Sbjct: 92 LARLETLDCGKPLDEAAWDMDDVAGCFEYFADLAESLDKRQNAPVSLPME-NFKCYLRKE 150
Query: 566 PVGVCGQIIPW---------------------NYPIPMMSWKIXPALXA 649
P+GV G I PW NYP+ M +WK+ PAL A
Sbjct: 151 PIGVVGLITPWYFTFFSHPALIFIYDPSMALMNYPLLMATWKVAPALAA 199
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 156 KLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHR 311
+LF+ EW + P +NP E+ I ++ G D+D AVAAA++A R
Sbjct: 9 QLFVAGEWRAPALGRRLPVVNPATESPIGEIPAGTAEDVDAAVAAAREALKR 60
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 401 LAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILGNTIPS-DGEVLTFTMKEPVGV 577
LAE T + GK +K + +V+ V+ + G +G + + + TF+++EP+GV
Sbjct: 103 LAENITTEQGKTLKDAWGDVFRGLEVVEHACGMGTLQMGEYVSNVSNGIDTFSIREPLGV 162
Query: 578 CGQIIPWNYPIPMMSW 625
C I P+N+P + W
Sbjct: 163 CAGICPFNFPAMIPLW 178
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +2
Query: 338 ASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILG 517
A +RG ++ +L L +L+ GK + + EV + Y G + ++ G
Sbjct: 103 APKRGEIVRQIGDALRAKLHHLGRLVSLEMGKILPEGIGEVQEIIDMCDYAVGLSRQLNG 162
Query: 518 NTIPSDG-EVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIXPAL 643
+ IPS+ + + P+GV G I +N+P ++ W AL
Sbjct: 163 SIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIAL 205
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Frame = +2
Query: 401 LAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILG-------NTIP-SDGEVLTFT 556
+AE + KP K + EV S ++ Y A + +ILG ++ P ++ +
Sbjct: 98 IAECLVKEIAKPAKDAISEVVRSGDLVSYTAEEGVRILGEGKLLVSDSFPGNERNKYCLS 157
Query: 557 MKEPVGVCGQIIPWNYPIPMMSWKIXPALXA 649
K P+GV I P+NYP+ + KI PAL A
Sbjct: 158 SKVPLGVVLAIPPFNYPVNLAVSKIGPALIA 188
>01_05_0543 + 23093519-23093624,23093912-23093934
Length = 42
Score = 35.1 bits (77), Expect = 0.069
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 135 KVDVKYTKLFINNEWVDAVSKKT 203
K+++K+TKLFIN +VDAVS +T
Sbjct: 16 KLEIKFTKLFINGRFVDAVSDET 38
>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +3
Query: 213 INPQDETVITQVAEGDKADIDLAVAAAKKAFHRLFPMAVPWT 338
INP D +V+TQV +D D AV KK F RL +A+P T
Sbjct: 1006 INPMDFSVVTQVLLDKLSDPDNAV---KKGFSRLLSIALPIT 1044
>04_04_0844 -
28637393-28638118,28638206-28638283,28638431-28638607,
28639124-28639537
Length = 464
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 439 KTIRRRSILFRKRAQILRWKSGQDIRKYHSFRRRSPYVHHEGTCRSVRSD 588
K + R + K A+IL +G+ R H+ RRRS HH +C S+ S+
Sbjct: 250 KWVEERYLDDEKNAKILEVDTGKPGR--HASRRRSGSHHHHSSCSSMTSE 297
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +2
Query: 401 LAELETLDCGKP-VKQSEEEVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMKE---- 565
+ E+ + D GK V S E+ + + + + +K L S G + +
Sbjct: 166 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLDEGEKWLKPEYRSCGRSMLHKKAKVEFY 225
Query: 566 PVGVCGQIIPWNYP 607
P+GV G I+ WNYP
Sbjct: 226 PLGVIGAIVSWNYP 239
>04_04_0158 -
23187070-23187264,23187347-23187477,23187550-23187763,
23187834-23187932,23188034-23188156,23188247-23188366,
23188447-23188506,23188592-23188884,23189554-23189707,
23189813-23190130,23190668-23190798,23191001-23191586,
23192125-23192739
Length = 1012
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 448 RRRSILFRKRAQILRWKSGQDIRKYHSFRRRSPYVHHEGTCRSVRSDNTVELPHTN 615
R IL RK ++ W+SG I Y + PY H R +++D HT+
Sbjct: 199 RTHEILERKTGGLVIWRSGSTIILYRGTDYKYPYFHD----REMKNDMDESSEHTS 250
>12_02_0760 -
22888636-22889407,22889503-22889769,22890001-22890302,
22890402-22890512,22890990-22891568,22892026-22892087,
22892434-22892754,22893434-22893776
Length = 918
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 241 HRSLKEIRRILIWPSPQQRKHSTXYSPWPYHGRFSTRPPIA 363
H SL E+ +IW + + + +PY G F RP IA
Sbjct: 742 HGSLVEVLTTIIWVASGHHA-AVNFGQYPYAGYFPNRPTIA 781
>06_03_0550 + 22023120-22023422
Length = 100
Score = 28.7 bits (61), Expect = 6.0
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = -1
Query: 343 RSVHGTAMGNXRWNAFFAAATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLI 164
R+V+ A N RW FF A + SALS +++ +++G FL+ A+ L I
Sbjct: 6 RAVNVAATAN-RW--FFLVAAIRITSALSLCLLACAVLAASYVVLG-YFLMLAAFVLLAI 61
Query: 163 NSLVYL 146
SLV+L
Sbjct: 62 TSLVFL 67
>02_04_0216 + 20986231-20988021
Length = 596
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1
Query: 307 WNAFFAAATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLINS 158
W A AAA A + +A + + V+ + + G V L A+ H+LL+ +
Sbjct: 9 WPAAAAAAPASAAAASAVTVEAVLALLERAISAGDVRRLGAAVHALLVKT 58
>01_05_0402 + 21810906-21811831,21811875-21812472,21813119-21813391
Length = 598
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 280 AKSISALSP-SATCVMTVSSCGLMVGKVFL 194
A S++ + P ATCV+T+S CG+ G L
Sbjct: 201 ANSVAIVPPLRATCVITMSHCGIGTGVAIL 230
>01_01_0135 +
1231687-1232188,1234489-1234564,1234646-1234743,
1234841-1235355
Length = 396
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 468 EKYTSSSDCFTGFPQSKVSSSARYLDWD 385
E Y S C + F S V+S RY++WD
Sbjct: 263 EGYFHSVVCNSDFRNSTVNSDMRYMEWD 290
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,187,935
Number of Sequences: 37544
Number of extensions: 356889
Number of successful extensions: 1079
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -