Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_E22
(870 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1007 + 26869731-26870429,26871262-26871387 31 1.2
01_03_0237 + 14068713-14069315,14069654-14069914 31 1.2
03_02_0137 + 5832608-5833590,5833680-5833731,5833827-5833904,583... 31 1.6
01_01_1008 - 7987936-7988628,7988923-7989102 31 1.6
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474... 29 6.4
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968... 29 6.4
02_03_0194 - 16215032-16215177,16215322-16215393,16215518-162155... 29 6.4
11_06_0399 - 23129476-23129745,23131040-23131121,23131216-231317... 28 8.5
10_05_0078 + 8891364-8891529,8891535-8891797 28 8.5
09_06_0308 - 22199389-22199451,22199604-22199924,22200178-222004... 28 8.5
03_05_0894 + 28571015-28571391,28571651-28571768,28572069-285723... 28 8.5
>06_03_1007 + 26869731-26870429,26871262-26871387
Length = 274
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 591 GL*RYQAFPPGSSLVRSPGSDPAAYRIPVRLSPFGKAWRFLIAHXV-GIS--VRCXVVRS 761
G R +A G +L R+ G D AA R+P+R++ W + AH V G+S +R
Sbjct: 123 GAARRRAAAAGRAL-RACGGDVAAARVPLRVAMAAALWWEVAAHRVSGVSGAGHADALRR 181
Query: 762 KLGCVHEP 785
C H P
Sbjct: 182 LEACAHVP 189
>01_03_0237 + 14068713-14069315,14069654-14069914
Length = 287
Score = 31.1 bits (67), Expect = 1.2
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Frame = -1
Query: 798 RAERGVRAHSPAWSERPYTELRYLQXEL*ESATLSRREKGGQVS-----GKRQGRNQESA 634
R R A S +R +R+ EL + ++ R++ GKR+GR + SA
Sbjct: 16 RQRRAAAATSSGVGKRRRRRIRWRSTELRDDVEMTHRQRAVDAGVEEERGKRRGRKRGSA 75
Query: 633 RGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 481
G +Q G V + T+ L GGG +GK R G WP
Sbjct: 76 SGLYQRLRCGRKTVTT---TARLLAAARSNGGGGGGFGK----RGKKGRWP 119
>03_02_0137 +
5832608-5833590,5833680-5833731,5833827-5833904,
5835228-5835347,5835618-5835716,5835821-5835975,
5836117-5836257,5836395-5836503
Length = 578
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 608 GVSPWKLPRALSWFRPCRLPDTCPPFSLRESVALSHSSXCRYLSSVXGRSLQAGLCART 784
G W LP +W C PP S+ S ++ R SS+ G+S + +RT
Sbjct: 277 GEGSWALPGLQAWKEDCEGKIGMPPVSVSSSAEFLNAGPNRLCSSLDGKSDRLSWDSRT 335
>01_01_1008 - 7987936-7988628,7988923-7989102
Length = 290
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 693 RREKGGQVSGKRQGRNQESARGSFQGETPG 604
RR GG+V+G+ R++ RG+++GE G
Sbjct: 245 RRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274
>09_04_0424 +
17444261-17444665,17445974-17446367,17447367-17447425,
17447507-17447637,17447737-17447833,17447936-17448100
Length = 416
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 754 FAPSWAVCTNPPFSPXAAPYPVTIVLSPP 840
F P AV PP P AAP PV + + P
Sbjct: 67 FVPFHAVGPPPPPQPRAAPPPVAVAMGSP 95
>06_03_0833 -
25196091-25196372,25196464-25196565,25196640-25196838,
25196978-25197278,25197471-25197645,25197842-25198012,
25198207-25198239
Length = 420
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 508 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL-VPTL-PLTGYLSA 681
CWR + T D Q + +KD P + PSC L+ +P L PL L A
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQPLHYSLYA 342
Query: 682 F 684
F
Sbjct: 343 F 343
>02_03_0194 -
16215032-16215177,16215322-16215393,16215518-16215593,
16215984-16216074,16216188-16216258,16216344-16216506,
16218841-16219065,16219206-16219507,16219551-16219680,
16219783-16220045
Length = 512
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 174 ALFVTIISCNKQVNKQTIAFILCFRFRGEVWEGF 275
ALF + ++ ++ QT+ CF++ G V +GF
Sbjct: 357 ALFAMVFDKHQDISVQTLQDFSCFQYSGSVDDGF 390
>11_06_0399 -
23129476-23129745,23131040-23131121,23131216-23131711,
23132135-23132699,23132825-23132893
Length = 493
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -3
Query: 397 DTRSPQPNDPSAASQ*ARKAKERPNTQPASPRALADFINAEKPSH 263
+T + + S+AS R+A+++ PA+P F N+ P+H
Sbjct: 92 ETSTASSSSSSSASAQRRRAEQQQQQVPATPGRPLLFFNSSSPAH 136
>10_05_0078 + 8891364-8891529,8891535-8891797
Length = 142
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 628 PSCALLVPTLPLTGYLSAFLPS 693
P CA L P +P+ G L F+PS
Sbjct: 92 PPCAFLPPDVPVEGILMIFVPS 113
>09_06_0308 -
22199389-22199451,22199604-22199924,22200178-22200423,
22202152-22203337,22203487-22203551,22204205-22204486,
22205005-22205106,22205587-22206105
Length = 927
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 595 YKDTRRFPLEAPSCALLVPTLPLTGYLSAFLPSGKRGAFS 714
++D R P P C L+P L G+ F S R FS
Sbjct: 357 WRDMVRLPAAEPQCPALLPWLVARGWPGCFSRSHLRSIFS 396
>03_05_0894 +
28571015-28571391,28571651-28571768,28572069-28572376,
28572452-28572583,28572672-28572770,28572950-28573487
Length = 523
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -3
Query: 391 RSPQPNDPSAASQ*ARKAKERPNTQPASPRALADFINAEKPSHTSPLNLKHKMNAIVCLL 212
R P P DP A + P QP SP + E+ +++ H V L+
Sbjct: 22 RPPAPPDPRLAFLRSEFDGREPGRQPPSPETREEPKGGERARSPVAVDIAHPWPEWVALM 81
Query: 211 TCLLQ 197
LLQ
Sbjct: 82 ELLLQ 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,125,218
Number of Sequences: 37544
Number of extensions: 534051
Number of successful extensions: 1764
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1764
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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