Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_E18
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81461-8|CAB03839.1|  442|Caenorhabditis elegans Hypothetical pr...    92   4e-19
Z73908-5|CAA98129.2|  325|Caenorhabditis elegans Hypothetical pr...    33   0.20 
AL021487-13|CAA16356.3|  326|Caenorhabditis elegans Hypothetical...    33   0.27 
Z29117-13|CAA82377.2|  435|Caenorhabditis elegans Hypothetical p...    31   1.4  
U88169-5|AAB42235.2|  367|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF106575-3|AAC78173.2|  287|Caenorhabditis elegans Hypothetical ...    29   4.3  
AF106575-2|AAQ62448.1|  506|Caenorhabditis elegans Hypothetical ...    29   4.3  
U42830-5|AAC48280.2|  437|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z79605-2|CAB01903.1|  342|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z81461-8|CAB03839.1|  442|Caenorhabditis elegans Hypothetical
           protein C04F12.10 protein.
          Length = 442

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 55/208 (26%), Positives = 102/208 (49%)
 Frame = +3

Query: 177 DEDAILYLILLFTWVEYLWEQYLSLRQLKIYKTNNTIPEDLKEMLNEDLFKKARLYGIDK 356
           D   +   +L   W  +LW+QY++ RQ K +K     P ++KE++ E+ +KKAR Y ID 
Sbjct: 2   DASCLFKALLATNWALFLWDQYITFRQYKAHKNAVKRPNEVKELIGEEDYKKARDYKIDN 61

Query: 357 EQFKIVKELYSTILTSVILYNKWIYVAWRKSEQIGAMFNISPDREIIISCIFMTFITLFN 536
             F      ++ +L +  L   +    W  +    A + +          +F++  ++  
Sbjct: 62  HLFGFFHSWFNQLLLTAQLIGGYYPFLWYAT----ASYPLH-------VAVFLSINSIIE 110

Query: 537 FIVNKPFTIYGVFVLEERHGFNKQTVRFFIKDQIKSLFLRFSDYITNNICSNYIIMLGRR 716
            I++ P+ +Y  F++E+ HGFNKQT+ F+  D+IK + + F+  +       +II+ G  
Sbjct: 111 TIIDLPWDLYSTFIIEDAHGFNKQTIGFYFVDKIKKMLVGFALTMPIVYGIEWIIVNGGP 170

Query: 717 HVCGVGYGYLLLVAHSYWLTLYPTSHSP 800
           +   V     + V     +T+YPT  +P
Sbjct: 171 YFF-VYIWLFVSVVVLLLMTIYPTFIAP 197



 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 793 IAPLFDKFVPLPD 831
           IAPLFDK+ PLPD
Sbjct: 195 IAPLFDKYFPLPD 207


>Z73908-5|CAA98129.2|  325|Caenorhabditis elegans Hypothetical
           protein F53B2.4 protein.
          Length = 325

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 492 IIISCIFMTFITLFNFIVNKPF-TIYGVFVLEERHGFNKQTVRFFIKDQIKSLFLRFSDY 668
           ++++C+ MT++    FI+ K F   Y   V ++    N       +  Q+ S+F   SDY
Sbjct: 27  VLVACVPMTYLVPTAFIILKVFKCYYRNLVGKQEATMNPHVFFVIVMAQLTSVFYMISDY 86

Query: 669 IT 674
           IT
Sbjct: 87  IT 88


>AL021487-13|CAA16356.3|  326|Caenorhabditis elegans Hypothetical
           protein Y45F10B.5 protein.
          Length = 326

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 492 IIISCIFMTFITLFNFIVNKPFTIY-GVFVLEERHGFNKQTVRFFIKDQIKSLFLRFSDY 668
           ++++CI +T++    FI+ K F  Y    V ++    N       +  Q+ S+F   SDY
Sbjct: 27  VLVACIPLTYLVPTVFIILKVFKCYFRNLVGKQEATMNPHVFFVIVTAQLTSIFFMLSDY 86

Query: 669 IT 674
           IT
Sbjct: 87  IT 88


>Z29117-13|CAA82377.2|  435|Caenorhabditis elegans Hypothetical
           protein C48B4.2 protein.
          Length = 435

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +3

Query: 603 KQTVRFFIKDQ-IKSLFLRFSDYITNNICSNYIIMLGRRHVCGVGYGYLLLVAHSYWLTL 779
           + TV+  IK+Q  K+   R S  I  N  S     L   H+  V Y ++LL++++   +L
Sbjct: 345 RTTVQEIIKNQSFKNNATRCSVQIGINCISWTSNFLIFDHIFHVSYSHVLLISNAVSNSL 404

Query: 780 YPTSHSPP 803
           YPT+ SPP
Sbjct: 405 YPTT-SPP 411


>U88169-5|AAB42235.2|  367|Caenorhabditis elegans Hypothetical
           protein T03F1.7 protein.
          Length = 367

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +3

Query: 210 FTWVEYLWEQYLSLRQLKIYKTNNTI-PEDLKEMLNEDLFKKARL 341
           F  +E +  Q    RQ  + K   T+ PE+L++ L++DL KK R+
Sbjct: 242 FEVLEKVCRQVFHYRQKYVTKGLKTLYPEELEDELSDDLLKKCRI 286


>AF106575-3|AAC78173.2|  287|Caenorhabditis elegans Hypothetical
           protein K04F1.14a protein.
          Length = 287

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 626 NKESYSLLIKSMSFLKNKHTINGKWF 549
           N E Y+  ++++SF KN  TING+ F
Sbjct: 105 NLEVYNTELQNLSFFKNLQTINGQLF 130


>AF106575-2|AAQ62448.1|  506|Caenorhabditis elegans Hypothetical
           protein K04F1.14b protein.
          Length = 506

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 626 NKESYSLLIKSMSFLKNKHTINGKWF 549
           N E Y+  ++++SF KN  TING+ F
Sbjct: 220 NLEVYNTELQNLSFFKNLQTINGQLF 245


>U42830-5|AAC48280.2|  437|Caenorhabditis elegans Hypothetical
           protein C53B7.7 protein.
          Length = 437

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -1

Query: 571 TP*MVNGLLTIKLNNVINVIKMQLIIISLSGEMLN-IAPICSLFLH 437
           TP ++N  LT ++ N+ N IKM + +   +  + N ++PI + FL+
Sbjct: 157 TPWVINNNLTEEMKNITNAIKMPVSLTKYTNFIYNLLSPIETDFLN 202


>Z79605-2|CAB01903.1|  342|Caenorhabditis elegans Hypothetical
           protein ZK678.2 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 22/61 (36%), Positives = 31/61 (50%)
 Frame = -1

Query: 544 TIKLNNVINVIKMQLIIISLSGEMLNIAPICSLFLHAT*IHLLYNITDVSIVLYSSLTIL 365
           ++KL N  NVIK QL+     G M+ +      +L    +    N TD++I LY   TIL
Sbjct: 219 SLKLENFANVIKSQLV-----GRMIQLRVTKEEYLLMA-VLFACNPTDINISLYGK-TIL 271

Query: 364 N 362
           N
Sbjct: 272 N 272


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,024,858
Number of Sequences: 27780
Number of extensions: 400886
Number of successful extensions: 1075
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)