Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_E16
         (883 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M73031-1|AAA58630.1|  108|Homo sapiens coupling factor 6 protein.      56   1e-07
M37104-1|AAA51807.1|  108|Homo sapiens ATPase coupling factor 6 ...    56   1e-07
CR456950-1|CAG33231.1|  108|Homo sapiens ATP5J protein.                56   1e-07
BT007244-1|AAP35908.1|  108|Homo sapiens ATP synthase, H+ transp...    56   1e-07
BC001178-1|AAH01178.1|  108|Homo sapiens ATP synthase, H+ transp...    56   1e-07
AY544129-1|AAT11160.1|  108|Homo sapiens proliferation-inducing ...    56   1e-07
BC066310-1|AAH66310.1|  108|Homo sapiens ATP synthase, H+ transp...    53   2e-06

>M73031-1|AAA58630.1|  108|Homo sapiens coupling factor 6 protein.
          Length = 108

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +2

Query: 161 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 334
           A  K  DPIQ+LF+DKIREYK K  ++GG V DAS                 +G     D
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYHQELERELFKLKQMFGNA---D 86

Query: 335 MTAFPSLKFEEPKLDPIDEQAA 400
           M  FP+ KFE+PK + I++  A
Sbjct: 87  MNTFPTFKFEDPKFEVIEKPQA 108


>M37104-1|AAA51807.1|  108|Homo sapiens ATPase coupling factor 6
           subunit protein.
          Length = 108

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +2

Query: 161 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 334
           A  K  DPIQ+LF+DKIREYK K  ++GG V DAS                 +G     D
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYQQELERELFKLKQMFGNA---D 86

Query: 335 MTAFPSLKFEEPKLDPIDEQAA 400
           M  FP+ KFE+PK + I++  A
Sbjct: 87  MNTFPTFKFEDPKFEVIEKPQA 108


>CR456950-1|CAG33231.1|  108|Homo sapiens ATP5J protein.
          Length = 108

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +2

Query: 161 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 334
           A  K  DPIQ+LF+DKIREYK K  ++GG V DAS                 +G     D
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYQQELERELFKLKQMFGNA---D 86

Query: 335 MTAFPSLKFEEPKLDPIDEQAA 400
           M  FP+ KFE+PK + I++  A
Sbjct: 87  MNTFPTFKFEDPKFEVIEKPQA 108


>BT007244-1|AAP35908.1|  108|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit F6
           protein.
          Length = 108

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +2

Query: 161 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 334
           A  K  DPIQ+LF+DKIREYK K  ++GG V DAS                 +G     D
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYQQELERELFKLKQMFGNA---D 86

Query: 335 MTAFPSLKFEEPKLDPIDEQAA 400
           M  FP+ KFE+PK + I++  A
Sbjct: 87  MNTFPTFKFEDPKFEVIEKPQA 108


>BC001178-1|AAH01178.1|  108|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit F6
           protein.
          Length = 108

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +2

Query: 161 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 334
           A  K  DPIQ+LF+DKIREYK K  ++GG V DAS                 +G     D
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYQQELERELFKLKQMFGNA---D 86

Query: 335 MTAFPSLKFEEPKLDPIDEQAA 400
           M  FP+ KFE+PK + I++  A
Sbjct: 87  MNTFPTFKFEDPKFEVIEKPQA 108


>AY544129-1|AAT11160.1|  108|Homo sapiens proliferation-inducing
           protein 36 protein.
          Length = 108

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +2

Query: 161 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 334
           A  K  DPIQ+LF+DKIREYK K  ++GG V DAS                 +G     D
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYQQELERELFKLKQMFGNA---D 86

Query: 335 MTAFPSLKFEEPKLDPIDEQAA 400
           M  FP+ KFE+PK + I++  A
Sbjct: 87  MNTFPTFKFEDPKFEVIEKPQA 108


>BC066310-1|AAH66310.1|  108|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit F6
           protein.
          Length = 108

 Score = 52.8 bits (121), Expect = 2e-06
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
 Frame = +2

Query: 161 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 334
           A  K  DPIQ+LF+DKIREYK K  ++GG V DAS                 +G     D
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYQQELERELFKLKQMFGNA---D 86

Query: 335 MTAFPSLKFEEPKLDPIDEQAA 400
           M  F + KFE+PK + I++  A
Sbjct: 87  MNTFHTFKFEDPKFEVIEKPQA 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,748,364
Number of Sequences: 237096
Number of extensions: 2254107
Number of successful extensions: 5179
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4482
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)