Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_E10
(878 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal prote... 248 4e-66
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis... 31 0.82
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 31 0.82
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis... 31 0.82
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis... 31 0.82
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis... 31 0.82
U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical pr... 31 0.82
U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical pr... 31 0.82
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 31 0.82
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa... 28 7.7
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as... 28 7.7
>U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 8 protein.
Length = 208
Score = 248 bits (607), Expect = 4e-66
Identities = 121/210 (57%), Positives = 153/210 (72%), Gaps = 1/210 (0%)
Frame = +1
Query: 70 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 249
MGISRD WHKR TG + KKRK+ELGRPAANT++G R+ VR+RGGN KYRALRL
Sbjct: 1 MGISRDSWHKRYKTGATQPVPHKKRKFELGRPAANTKIGAHRVRLVRTRGGNEKYRALRL 60
Query: 250 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 429
D+GNFSW SE +TRKTRI+D +YNA+NNELVRTKTLVK AI+ VDA PFRQWYE+HY LP
Sbjct: 61 DSGNFSWASEQTTRKTRIVDTMYNATNNELVRTKTLVKGAIISVDAAPFRQWYEAHYALP 120
Query: 430 LGRKKGAKLTEAEEAIINKKRSQKTARKYLXK-ATVLLRLRVLXKSNSTRGVCWLAWRVA 606
L RKK AKL+E + AI+NKKRS T +KY + T + ++ + N+ R + ++
Sbjct: 121 LARKKNAKLSEEDNAILNKKRSHHTMKKYTERQKTAAVDALLIEQFNTGRLLARISSSPG 180
Query: 607 QVSVVAPMVTSXKAKELEFYLRKIKSKRAK 696
QV + + KEL+FYLRKI++K+AK
Sbjct: 181 QVGQANGYI--LEGKELDFYLRKIRAKKAK 208
>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug
resistance related protein1 protein.
Length = 1540
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 238 ALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 342
A+++D G+F+WGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform e protein.
Length = 1534
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 238 ALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 342
A+++D G+F+WGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform c protein.
Length = 1534
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 238 ALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 342
A+++D G+F+WGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform b protein.
Length = 1534
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 238 ALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 342
A+++D G+F+WGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform a protein.
Length = 1528
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 238 ALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 342
A+++D G+F+WGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical
protein F11D5.3b protein.
Length = 767
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 469 EAIINKKRSQKTARKYLXKATVLLRLRVLXKSNSTRGVC 585
E I ++ R++L +A + R+R++ SNSTR VC
Sbjct: 105 ETIPANNDTEHAIRRHLDRAIIARRIRIVPVSNSTRTVC 143
>U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical
protein F11D5.3a protein.
Length = 797
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 469 EAIINKKRSQKTARKYLXKATVLLRLRVLXKSNSTRGVC 585
E I ++ R++L +A + R+R++ SNSTR VC
Sbjct: 135 ETIPANNDTEHAIRRHLDRAIIARRIRIVPVSNSTRTVC 173
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 238 ALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 342
A+++D G+F+WGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
protein kinase protein.
Length = 1425
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Frame = +1
Query: 328 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG------RKKGAKLTEAEEAIINKK 489
++++ + T ++ V D TPF YE L G R + K E A KK
Sbjct: 2 SDDVNSSATSTSSSTVHFDDTPFEDVYEIETELGSGQFAVVRRVRDRKTGEKYAAKFIKK 61
Query: 490 RSQKTARKYLXKATVLLRLRVLXKSNSTRGV 582
R T+R+ + + + +RVL K V
Sbjct: 62 RRYATSRRGVTRQNIEREVRVLQKIRGNSNV 92
>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
(death-associated protein)kinase homolog protein 1
protein.
Length = 1425
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Frame = +1
Query: 328 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG------RKKGAKLTEAEEAIINKK 489
++++ + T ++ V D TPF YE L G R + K E A KK
Sbjct: 2 SDDVNSSATSTSSSTVHFDDTPFEDVYEIETELGSGQFAVVRRVRDRKTGEKYAAKFIKK 61
Query: 490 RSQKTARKYLXKATVLLRLRVLXKSNSTRGV 582
R T+R+ + + + +RVL K V
Sbjct: 62 RRYATSRRGVTRQNIEREVRVLQKIRGNSNV 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,436,316
Number of Sequences: 27780
Number of extensions: 348442
Number of successful extensions: 991
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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