Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_E04
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 32 0.46
Z47356-8|CAD27185.1| 477|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z47075-8|CAA87381.2| 477|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81115-2|CAB03292.1| 314|Caenorhabditis elegans Hypothetical pr... 30 1.9
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 30 2.5
Z35663-16|CAA84726.2| 462|Caenorhabditis elegans Hypothetical p... 29 3.3
Z81134-5|CAB54316.1| 101|Caenorhabditis elegans Hypothetical pr... 29 5.7
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 28 7.5
U10414-11|AAA19078.1| 187|Caenorhabditis elegans Hypothetical p... 28 7.5
AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion transpo... 28 10.0
AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion transpo... 28 10.0
AF026213-4|AAB71305.2| 458|Caenorhabditis elegans Cell death ab... 28 10.0
AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate perme... 28 10.0
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 32.3 bits (70), Expect = 0.46
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 597 RSKHCHHDADELIIGGTDAGVNEYPHMVLLGYGDDVANIQ--WL--CGGVLISERFVLTA 764
R + C + I G A ++E P V + +V NI W C G L S R +LTA
Sbjct: 29 RLEDCGKNVKSKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTA 88
Query: 765 GH 770
H
Sbjct: 89 TH 90
>Z47356-8|CAD27185.1| 477|Caenorhabditis elegans Hypothetical
protein E02H1.7 protein.
Length = 477
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +3
Query: 36 KI*LASDRRWRQTRHVPYERNK*CANNKLT--LNSLKMD-QSIYLLLMSVLFVCVHCEFE 206
KI +++DRRWRQ + Y++ C +++ L +LK+ Q I ++ + VLF C C +
Sbjct: 339 KISVSADRRWRQEK--LYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNC-GCSSD 395
Query: 207 GEECKKGNLLGVCTNIRKCQSAL 275
E + + V T K SAL
Sbjct: 396 YSEITEASRRIVLTFRNKVVSAL 418
>Z47075-8|CAA87381.2| 477|Caenorhabditis elegans Hypothetical
protein E02H1.7 protein.
Length = 477
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +3
Query: 36 KI*LASDRRWRQTRHVPYERNK*CANNKLT--LNSLKMD-QSIYLLLMSVLFVCVHCEFE 206
KI +++DRRWRQ + Y++ C +++ L +LK+ Q I ++ + VLF C C +
Sbjct: 339 KISVSADRRWRQEK--LYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNC-GCSSD 395
Query: 207 GEECKKGNLLGVCTNIRKCQSAL 275
E + + V T K SAL
Sbjct: 396 YSEITEASRRIVLTFRNKVVSAL 418
>Z81115-2|CAB03292.1| 314|Caenorhabditis elegans Hypothetical
protein T05D4.2 protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 417 EYVPPSYDYQSNNGDKKCEDVPADLTS-PKTGQKAWDKCIEYQEQ 548
E++ ++ Y NN +C ++ D+ S P+ K D+C EYQ Q
Sbjct: 43 EHLTSAHSYTKNN-HCQCYEIAVDICSEPRVRVKGLDRCWEYQIQ 86
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 624 DELIIGGTDAGVNEYPHMVLLGYGDDVANI-QWLCGGVLISERFVLTAGH 770
D +IGG+++ + +P V L ++ + CGG LI FVLTA H
Sbjct: 55 DHRLIGGSESSPHSWPWTVQL-----LSRLGHHRCGGSLIDPNFVLTAAH 99
>Z35663-16|CAA84726.2| 462|Caenorhabditis elegans Hypothetical
protein T04A8.3 protein.
Length = 462
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 435 YDYQSNNGD--KKCEDVPADLTSPKTGQKAWDKCIEYQEQLVYPCEKGVALTGEISRSKH 608
+D NN D KKC D+ A L+S T ++ K ++ VYP + +A+ R +
Sbjct: 295 HDMSMNNDDAEKKCNDMGAHLSSFTTYEEL--KLLDEMILEVYPNDNNIAVWLGAKRREE 352
Query: 609 CHHDADELIIGGTDAGVNE 665
C D + GG +++
Sbjct: 353 C-GDLSKNFTGGYSKDIHD 370
>Z81134-5|CAB54316.1| 101|Caenorhabditis elegans Hypothetical
protein T28D6.9 protein.
Length = 101
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/27 (37%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -2
Query: 497 RRQIRRYILAFLV-AIVGLVIIGGWHV 420
RRQIR+Y++A +V +I ++++ W +
Sbjct: 50 RRQIRKYVIASIVGSIFWIIVLSAWEI 76
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 633 IIGGT--DAGVNEYPHMVLLGYGDDVANIQWLCGGVLISERFVLTAGH 770
IIGG D G N +V YGD+ I LCG +I + +++TA H
Sbjct: 38 IIGGNSIDDGANWMAKLV--SYGDNGQGI--LCGATVIDDFWLVTAAH 81
>U10414-11|AAA19078.1| 187|Caenorhabditis elegans Hypothetical
protein F42A10.7 protein.
Length = 187
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -3
Query: 616 WWQCLLRLISPVSATPFSHGYTSCS*YSIHLSHAFCPVLGDVRSAGTSSHFLSPLL 449
WWQC + ++ATP+ Y IHLS P++ + +S ++SP L
Sbjct: 41 WWQCSSGPVQFLNATPYDSTGKQYE-YPIHLSQ---PIVVKTQINNPTSTYVSPNL 92
>AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion
transporter SULP-1b protein.
Length = 729
Score = 27.9 bits (59), Expect = 10.0
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 627 ELIIGGTDAGVNEYPHMVLLGYGDDVANIQWLCG--GVLISERFVLTAGHXLXSXKGWRS 800
++++ G A V + M LLG+ + V Q+ L+S R + H S G+R
Sbjct: 650 KILLAGVPAFVRD--SMELLGFYNTVPRTQFYPNVQEALLSARNTVLPFHMSVSMNGYRD 707
Query: 801 XIRVYRAPSPGXXNTNPVPPA 863
I + A S N P P A
Sbjct: 708 VIALSCAASNADLNRQPSPEA 728
>AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion
transporter SULP-1a protein.
Length = 729
Score = 27.9 bits (59), Expect = 10.0
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 627 ELIIGGTDAGVNEYPHMVLLGYGDDVANIQWLCG--GVLISERFVLTAGHXLXSXKGWRS 800
++++ G A V + M LLG+ + V Q+ L+S R + H S G+R
Sbjct: 650 KILLAGVPAFVRD--SMELLGFYNTVPRTQFYPNVQEALLSARNTVLPFHMSVSMNGYRD 707
Query: 801 XIRVYRAPSPGXXNTNPVPPA 863
I + A S N P P A
Sbjct: 708 VIALSCAASNADLNRQPSPEA 728
>AF026213-4|AAB71305.2| 458|Caenorhabditis elegans Cell death
abnormality protein 8 protein.
Length = 458
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -2
Query: 563 TRIHELLLIFNTFVPCLLP-GLGRRQIR-RYILAFLVAIVGLVII 435
T I +LLL+ NTF+ +P + R RY+ A+ V + ++++
Sbjct: 316 THIEKLLLLINTFIHIFIPFNMVEGNTRWRYLTAYSVEFIEMMLV 360
>AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate permease
family protein 1 protein.
Length = 729
Score = 27.9 bits (59), Expect = 10.0
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 627 ELIIGGTDAGVNEYPHMVLLGYGDDVANIQWLCG--GVLISERFVLTAGHXLXSXKGWRS 800
++++ G A V + M LLG+ + V Q+ L+S R + H S G+R
Sbjct: 650 KILLAGVPAFVRD--SMELLGFYNTVPRTQFYPNVQEALLSARNTVLPFHMSVSMNGYRD 707
Query: 801 XIRVYRAPSPGXXNTNPVPPA 863
I + A S N P P A
Sbjct: 708 VIALSCAASNADLNRQPSPEA 728
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,723,019
Number of Sequences: 27780
Number of extensions: 384336
Number of successful extensions: 962
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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