Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_E02
(1078 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.016
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.016
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.016
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.087
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.087
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.087
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.27
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 33 0.35
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.35
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.46
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 31 1.1
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 31 1.1
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 1.1
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 31 1.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.4
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.9
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.9
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.9
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 30 2.5
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 30 2.5
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 30 2.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 26 2.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 26 2.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 3.3
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 30 3.3
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 30 3.3
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 3.3
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 5.7
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 5.7
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 5.7
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 5.7
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 5.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.7
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 7.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 7.6
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 7.6
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 10.0
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 10.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.016
Identities = 25/77 (32%), Positives = 25/77 (32%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXGGGXXX 604
PP GG PP PP G PP G P PP GG P PP
Sbjct: 720 PPITGGPPPPPPPGGLPPIT-----GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 605 XXXKKKKXXPPPXXXXG 655
K PPP G
Sbjct: 775 PPPGGFKGGPPPPPPPG 791
Score = 32.3 bits (70), Expect = 0.61
Identities = 30/100 (30%), Positives = 31/100 (31%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXGGGXXX 604
PP GG PP P G PP G P PP G + P PP GG
Sbjct: 707 PPITGGPPP---PPGLPP----ITGGPPPPPPPGGLPPITGGPPPPPPP------GGLPP 753
Query: 605 XXXKKKKXXPPPXXXXGXXNXXXXXXXXXXGGXGXPPPPP 724
PPP G G PPPPP
Sbjct: 754 I---SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 31.5 bits (68), Expect = 1.1
Identities = 24/65 (36%), Positives = 24/65 (36%)
Frame = -2
Query: 594 PPPXLXXXXGGXXGEXKXTXPPPXGGXFXGAPXKKXIFXGGGPXGGKXGGXPPXLGGEXX 415
PPP L GG PPP GG P GG P GG PP GG
Sbjct: 715 PPPGLPPITGGPP------PPPPPGGL----PP----ITGGPPPPPPPGGLPPISGGPPP 760
Query: 414 IPXPP 400
P PP
Sbjct: 761 PPPPP 765
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +3
Query: 633 PPPXXXXXXXTXXXXXXXXXXGGXGXPPPXPXXXXXPXGXGGGXGXPPPP 782
PPP + GG PPP P P G GG PPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP----PGGFKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 910 PPPPXXPPXXPRXXGGPRPP 969
PPPP P P GGP PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPP 745
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 910 PPPPXXPPXXPRXXGGPRPP 969
PPPP P P GGP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPP 761
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 705 GXPPPXPXXXXXPXGXGGGXGXPPPP 782
G PPP P P GG PPPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.016
Identities = 25/77 (32%), Positives = 25/77 (32%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXGGGXXX 604
PP GG PP PP G PP G P PP GG P PP
Sbjct: 720 PPITGGPPPPPPPGGLPPIT-----GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 605 XXXKKKKXXPPPXXXXG 655
K PPP G
Sbjct: 775 PPPGGFKGGPPPPPPPG 791
Score = 32.3 bits (70), Expect = 0.61
Identities = 30/100 (30%), Positives = 31/100 (31%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXGGGXXX 604
PP GG PP P G PP G P PP G + P PP GG
Sbjct: 707 PPITGGPPP---PPGLPP----ITGGPPPPPPPGGLPPITGGPPPPPPP------GGLPP 753
Query: 605 XXXKKKKXXPPPXXXXGXXNXXXXXXXXXXGGXGXPPPPP 724
PPP G G PPPPP
Sbjct: 754 I---SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 31.5 bits (68), Expect = 1.1
Identities = 24/65 (36%), Positives = 24/65 (36%)
Frame = -2
Query: 594 PPPXLXXXXGGXXGEXKXTXPPPXGGXFXGAPXKKXIFXGGGPXGGKXGGXPPXLGGEXX 415
PPP L GG PPP GG P GG P GG PP GG
Sbjct: 715 PPPGLPPITGGPP------PPPPPGGL----PP----ITGGPPPPPPPGGLPPISGGPPP 760
Query: 414 IPXPP 400
P PP
Sbjct: 761 PPPPP 765
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +3
Query: 633 PPPXXXXXXXTXXXXXXXXXXGGXGXPPPXPXXXXXPXGXGGGXGXPPPP 782
PPP + GG PPP P P G GG PPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP----PGGFKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 910 PPPPXXPPXXPRXXGGPRPP 969
PPPP P P GGP PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPP 745
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 910 PPPPXXPPXXPRXXGGPRPP 969
PPPP P P GGP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPP 761
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 705 GXPPPXPXXXXXPXGXGGGXGXPPPP 782
G PPP P P GG PPPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.016
Identities = 25/77 (32%), Positives = 25/77 (32%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXGGGXXX 604
PP GG PP PP G PP G P PP GG P PP
Sbjct: 303 PPITGGPPPPPPPGGLPPIT-----GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Query: 605 XXXKKKKXXPPPXXXXG 655
K PPP G
Sbjct: 358 PPPGGFKGGPPPPPPPG 374
Score = 32.3 bits (70), Expect = 0.61
Identities = 30/100 (30%), Positives = 31/100 (31%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXGGGXXX 604
PP GG PP P G PP G P PP G + P PP GG
Sbjct: 290 PPITGGPPP---PPGLPP----ITGGPPPPPPPGGLPPITGGPPPPPPP------GGLPP 336
Query: 605 XXXKKKKXXPPPXXXXGXXNXXXXXXXXXXGGXGXPPPPP 724
PPP G G PPPPP
Sbjct: 337 I---SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 31.5 bits (68), Expect = 1.1
Identities = 24/65 (36%), Positives = 24/65 (36%)
Frame = -2
Query: 594 PPPXLXXXXGGXXGEXKXTXPPPXGGXFXGAPXKKXIFXGGGPXGGKXGGXPPXLGGEXX 415
PPP L GG PPP GG P GG P GG PP GG
Sbjct: 298 PPPGLPPITGGPP------PPPPPGGL----PP----ITGGPPPPPPPGGLPPISGGPPP 343
Query: 414 IPXPP 400
P PP
Sbjct: 344 PPPPP 348
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +3
Query: 633 PPPXXXXXXXTXXXXXXXXXXGGXGXPPPXPXXXXXPXGXGGGXGXPPPP 782
PPP + GG PPP P P G GG PPPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP----PGGFKGGPPPPPPP 373
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 910 PPPPXXPPXXPRXXGGPRPP 969
PPPP P P GGP PP
Sbjct: 309 PPPPPPPGGLPPITGGPPPP 328
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 910 PPPPXXPPXXPRXXGGPRPP 969
PPPP P P GGP PP
Sbjct: 325 PPPPPPPGGLPPISGGPPPP 344
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 705 GXPPPXPXXXXXPXGXGGGXGXPPPP 782
G PPP P P GG PPPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPP 348
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.087
Identities = 29/105 (27%), Positives = 31/105 (29%), Gaps = 6/105 (5%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGG-GXVXFXSPXXPPXXXNKXGGGXXX 604
P G PP PP G PP G+P P G SP PP
Sbjct: 232 PPAGSPPPPPPPKGSPPLA---GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 288
Query: 605 XXXKKKKXXPPPXXXXGXXNXXXXXXXXXXG-----GXGXPPPPP 724
+ PPP G G G G PPPPP
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 33.9 bits (74), Expect = 0.20
Identities = 19/48 (39%), Positives = 20/48 (41%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
PP+ G PP PP G PP A PP G G SP PP
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG-----SPPPPP 333
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
PP+ GG PP PPP AP PP G PP
Sbjct: 314 PPQAGGSPPPAGTGSPPPPPRQ-KRQAPERSPPTGSPPTGSPPTGRPP 360
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 898 GXPAPPPPXXPPXXPRXXGGPRPP 969
G P PPP P PR P PP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPP 276
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 705 GXPPPXPXXXXXPXGXGGGXGXPPPP 782
G PPP P P G PPPP
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPP 303
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 898 GXPAPPPPXXPPXXPRXXGGPRPP 969
G P PPP P PR P PP
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.087
Identities = 29/105 (27%), Positives = 31/105 (29%), Gaps = 6/105 (5%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGG-GXVXFXSPXXPPXXXNKXGGGXXX 604
P G PP PP G PP G+P P G SP PP
Sbjct: 253 PPAGSPPPPPPPKGSPPLA---GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 309
Query: 605 XXXKKKKXXPPPXXXXGXXNXXXXXXXXXXG-----GXGXPPPPP 724
+ PPP G G G G PPPPP
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 33.9 bits (74), Expect = 0.20
Identities = 19/48 (39%), Positives = 20/48 (41%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
PP+ G PP PP G PP A PP G G SP PP
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG-----SPPPPP 354
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
PP+ GG PP PPP AP PP G PP
Sbjct: 335 PPQAGGSPPPAGTGSPPPPPRQ-KRQAPERSPPTGSPPTGSPPTGRPP 381
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 898 GXPAPPPPXXPPXXPRXXGGPRPP 969
G P PPP P PR P PP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPP 297
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 705 GXPPPXPXXXXXPXGXGGGXGXPPPP 782
G PPP P P G PPPP
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPP 324
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 898 GXPAPPPPXXPPXXPRXXGGPRPP 969
G P PPP P PR P PP
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.087
Identities = 29/105 (27%), Positives = 31/105 (29%), Gaps = 6/105 (5%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGG-GXVXFXSPXXPPXXXNKXGGGXXX 604
P G PP PP G PP G+P P G SP PP
Sbjct: 238 PPAGSPPPPPPPKGSPPLA---GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 294
Query: 605 XXXKKKKXXPPPXXXXGXXNXXXXXXXXXXG-----GXGXPPPPP 724
+ PPP G G G G PPPPP
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 33.9 bits (74), Expect = 0.20
Identities = 19/48 (39%), Positives = 20/48 (41%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
PP+ G PP PP G PP A PP G G SP PP
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG-----SPPPPP 339
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
PP+ GG PP PPP AP PP G PP
Sbjct: 320 PPQAGGSPPPAGTGSPPPPPRQ-KRQAPERSPPTGSPPTGSPPTGRPP 366
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 898 GXPAPPPPXXPPXXPRXXGGPRPP 969
G P PPP P PR P PP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPP 282
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 705 GXPPPXPXXXXXPXGXGGGXGXPPPP 782
G PPP P P G PPPP
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPP 309
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 898 GXPAPPPPXXPPXXPRXXGGPRPP 969
G P PPP P PR P PP
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPP 307
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.5 bits (73), Expect = 0.27
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
P GG P F P G PP P PP GG F PP
Sbjct: 161 PPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPP 207
Score = 32.7 bits (71), Expect = 0.46
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
P GG P F P G PP P PP GG F PP
Sbjct: 146 PPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPP 192
Score = 32.7 bits (71), Expect = 0.46
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
P GG P F P G PP P PP GG F PP
Sbjct: 236 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 282
Score = 32.7 bits (71), Expect = 0.46
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
P GG P F P G PP P PP GG F PP
Sbjct: 326 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 372
Score = 32.7 bits (71), Expect = 0.46
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
P GG P F P G PP P PP GG F PP
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP 417
Score = 32.7 bits (71), Expect = 0.46
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
P GG P F P G PP P PP GG F PP
Sbjct: 476 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 522
Score = 32.3 bits (70), Expect = 0.61
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
P GG P F P G PP P PP GG F PP
Sbjct: 416 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP 462
Score = 32.3 bits (70), Expect = 0.61
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
P GG P F P G PP P PP GG F PP
Sbjct: 461 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP 507
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
P GG P F P PP P PP GG F PP
Sbjct: 191 PPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPP 237
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPP 568
P GG P F P G PP P P GG F PP
Sbjct: 281 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPP 327
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 33.1 bits (72), Expect = 0.35
Identities = 28/110 (25%), Positives = 30/110 (27%), Gaps = 6/110 (5%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXGGGXXX 604
PPK G PP PP G P + PP G P P + G
Sbjct: 99 PPKGTGTPPP-PPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRR 157
Query: 605 XXXKKKKXXPPPXXXXG------XXNXXXXXXXXXXGGXGXPPPPPXXXP 736
K PP G G G PPPPP P
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEP 207
Score = 31.9 bits (69), Expect = 0.81
Identities = 29/104 (27%), Positives = 32/104 (30%), Gaps = 4/104 (3%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXGGGXXX 604
PPK G PP PP G P A PP G +P PP + G
Sbjct: 67 PPKGTGTPPP-PPTGEPQDLSAEEGNASRRPPPPPKGT---GTPPPPPTGEPQDLSG--- 119
Query: 605 XXXKKKKXXPPPXXXXGXXNXXXXXXXXXXGGXG----XPPPPP 724
+ PPP G G G PPPPP
Sbjct: 120 -EGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPP 162
Score = 31.1 bits (67), Expect = 1.4
Identities = 29/104 (27%), Positives = 32/104 (30%), Gaps = 4/104 (3%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXGGGXXX 604
PPK G PP PP G P + PP G SP PP + G
Sbjct: 192 PPKGTGTPPP-PPTGEPQDLSAEGYASRRPPPPPKG----TGSPTPPPTGEPQDLSG--- 243
Query: 605 XXXKKKKXXPPPXXXXGXXNXXXXXXXXXXGGXG----XPPPPP 724
+ PPP G G G PPPPP
Sbjct: 244 -EGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPP 286
Score = 30.7 bits (66), Expect = 1.9
Identities = 28/111 (25%), Positives = 31/111 (27%), Gaps = 7/111 (6%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXN-KXGGGXX 601
PPK G PP PP G P + PP G P P + + G
Sbjct: 36 PPKGTGTPPP-PPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASR 94
Query: 602 XXXXKKKKXXPPPXXXXG------XXNXXXXXXXXXXGGXGXPPPPPXXXP 736
K PP G G G PPPPP P
Sbjct: 95 RPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEP 145
Score = 30.3 bits (65), Expect = 2.5
Identities = 27/110 (24%), Positives = 29/110 (26%), Gaps = 6/110 (5%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXGGGXXX 604
PPK G PP PP G P + PP G P P + G
Sbjct: 130 PPKGTGSPPP-PPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRR 188
Query: 605 XXXKKKKXXPPPXXXXG------XXNXXXXXXXXXXGGXGXPPPPPXXXP 736
K PP G G G P PPP P
Sbjct: 189 PPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEP 238
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 33.1 bits (72), Expect = 0.35
Identities = 28/101 (27%), Positives = 30/101 (29%), Gaps = 2/101 (1%)
Frame = +2
Query: 425 PPKXGGXPPXFPP--XGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXGGGX 598
PP G PP PP GPPP + G PP F + PP G
Sbjct: 709 PPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAG--- 765
Query: 599 XXXXXKKKKXXPPPXXXXGXXNXXXXXXXXXXGGXGXPPPP 721
PPP GG G PPPP
Sbjct: 766 ------PMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPP 800
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.46
Identities = 23/65 (35%), Positives = 23/65 (35%)
Frame = -2
Query: 594 PPPXLXXXXGGXXGEXKXTXPPPXGGXFXGAPXKKXIFXGGGPXGGKXGGXPPXLGGEXX 415
PPP G G PPP G GAP G P GG G PP GG
Sbjct: 392 PPPSAFGAPQGPGGPGGYGPPPPGG---PGAPGSY-----GPPQGGPGGFGPPPPGGPGA 443
Query: 414 IPXPP 400
PP
Sbjct: 444 YGPPP 448
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Frame = +3
Query: 696 GGXGXPPPX----PXXXXXPXGXGGGXGXPPP 779
GG G PPP P P G GG G PPP
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1
Query: 526 GGGGXXWGXPXKXXFXGGGXXGGKXXGXXPPFGGG 422
GGGG WG P + G G GG G +GGG
Sbjct: 185 GGGGGGWGGPAQRG--GPGAYGGPGGGGQGGYGGG 217
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1
Query: 526 GGGGXXWGXPXKXXFXGGGXXGGKXXGXXPPFGGG 422
GGGG WG P + G G GG G +GGG
Sbjct: 223 GGGGGGWGGPAQRG--GPGAYGGPGGGGQGGYGGG 255
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 696 GGXGXPPPXPXXXXXPXGXGGGXGXPPP 779
GG G PP P G GGG PPP
Sbjct: 25 GGCGCAPPPPPPACGCGGGGGGYAAPPP 52
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 781 GGGGXPXPPPXPLGXXXXXGXGGGXPXPP 695
GGGG PP P G GGG PP
Sbjct: 23 GGGGCGCAPPPPPPACGCGGGGGGYAAPP 51
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 898 GXPAPPPPXXPPXXPRXXGGPRPP 969
G P PPP PP P GG PP
Sbjct: 32 GAPPPPPACAPPPAPACGGGAPPP 55
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 699 GXGXPPPXPXXXXXPXGXGGGXGXPPPP 782
G G PPP P P GG G PPPP
Sbjct: 30 GCGAPPPPPACAPPPAPACGG-GAPPPP 56
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.1 bits (67), Expect = 1.4
Identities = 27/103 (26%), Positives = 27/103 (26%), Gaps = 5/103 (4%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXG-----GGXVXFXSPXXPPXXXNKXG 589
P GG PP P P G P PP G F P PP G
Sbjct: 103 PGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMG--G 160
Query: 590 GGXXXXXXKKKKXXPPPXXXXGXXNXXXXXXXXXXGGXGXPPP 718
GG P G GG G PPP
Sbjct: 161 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 203
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 781 GGGGXPXPPPXPLGXXXXXGXGGGXP 704
GGGG P PP +G G GG P
Sbjct: 159 GGGGDPRGPPGGMGGPPGHGGMGGPP 184
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.1 bits (67), Expect = 1.4
Identities = 27/103 (26%), Positives = 27/103 (26%), Gaps = 5/103 (4%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXG-----GGXVXFXSPXXPPXXXNKXG 589
P GG PP P P G P PP G F P PP G
Sbjct: 383 PGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMG--G 440
Query: 590 GGXXXXXXKKKKXXPPPXXXXGXXNXXXXXXXXXXGGXGXPPP 718
GG P G GG G PPP
Sbjct: 441 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 483
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 781 GGGGXPXPPPXPLGXXXXXGXGGGXP 704
GGGG P PP +G G GG P
Sbjct: 439 GGGGDPRGPPGGMGGPPGHGGMGGPP 464
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.9
Identities = 33/121 (27%), Positives = 33/121 (27%), Gaps = 2/121 (1%)
Frame = -1
Query: 781 GGGGXPXPPPXPLGXXXXXGXGGGXPXPPXXXXXXXXXGVXXXXXXXGG--GXXFFFFXX 608
GGG P PPP G G GG G GG G
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGG 108
Query: 607 XXXXPPPXFVXXXXGXXXGXKXDXPPPGGGGXXWGXPXKXXFXGGGXXGGKXXGXXPPFG 428
PPP G G GGGG G GGG GG G G
Sbjct: 109 CAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGG 168
Query: 427 G 425
G
Sbjct: 169 G 169
Score = 28.3 bits (60), Expect = 10.0
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = -1
Query: 565 GXXXGXKXDXPPPG-GGGXXWGXPXKXXFXGGGXXGGKXXGXXPPFGGG 422
G G PPP GGG G GGG GG G GGG
Sbjct: 104 GCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGG 152
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 696 GGXGXPPPXPXXXXXPXGXGGGXGXPPP 779
GG G PPP P P GGG G PP
Sbjct: 785 GGPGAPPP-PGMRPPPGAPGGGGGMYPP 811
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 696 GGXGXPPPXPXXXXXPXGXGGGXGXPPP 779
GG G PPP P P GGG G PP
Sbjct: 785 GGPGAPPP-PGMRPPPGAPGGGGGMYPP 811
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 696 GGXGXPPPXPXXXXXPXGXGGGXGXPPP 779
G G PPP P P G GG PPP
Sbjct: 312 GMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 904 PAPPPPXXPPXXPRXXGGPRPP 969
P PPPP P P G P PP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPP 320
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 696 GGXGXPPPXPXXXXXPXGXGGGXGXPPP 779
G G PPP P P G GG PPP
Sbjct: 322 GMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 904 PAPPPPXXPPXXPRXXGGPRPP 969
P PPPP P P G P PP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPP 330
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 696 GGXGXPPPXPXXXXXPXGXGGGXGXPPP 779
GG G PPP P P GGG G PP
Sbjct: 785 GGPGAPPP-PGMRPPPGAPGGGGGMYPP 811
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 696 GGXGXPPPXPXXXXXPXGXGGGXGXPPP 779
GG G PPP P P GGG G PP
Sbjct: 785 GGPGAPPP-PGMRPPPGAPGGGGGMYPP 811
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical protein
Y41E3.2 protein.
Length = 289
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +1
Query: 898 GXPAPPPPXXPPXXPRXXGGPRPPXXHXKKKXXXXGGXGXP 1020
G P P P PP P G P P K + G G P
Sbjct: 171 GEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPP 211
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 904 PAPPPPXXPPXXPRXXGGPRPP 969
P PPPP P PR GG PP
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPP 792
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 778 GGGXPXPPPXPLGXXXXXGXGGGXPXPP 695
G G P PPP P GG P PP
Sbjct: 766 GVGVPPPPPPPSAIPLPPRLQGGIPPPP 793
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 904 PAPPPPXXPPXXPRXXGGPRPP 969
P PPPP P PR GG PP
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPP 792
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 778 GGGXPXPPPXPLGXXXXXGXGGGXPXPP 695
G G P PPP P GG P PP
Sbjct: 766 GVGVPPPPPPPSAIPLPPRLQGGIPPPP 793
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 25.8 bits (54), Expect(2) = 2.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 910 PPPPXXPPXXPRXXGGPRPP 969
PPPP PP P G P PP
Sbjct: 794 PPPP--PPLPPISSGAPPPP 811
Score = 22.6 bits (46), Expect(2) = 2.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 904 PAPPPPXXPP 933
P PPPP PP
Sbjct: 765 PPPPPPPPPP 774
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 25.8 bits (54), Expect(2) = 2.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 910 PPPPXXPPXXPRXXGGPRPP 969
PPPP PP P G P PP
Sbjct: 794 PPPP--PPLPPISSGAPPPP 811
Score = 22.6 bits (46), Expect(2) = 2.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 904 PAPPPPXXPP 933
P PPPP PP
Sbjct: 765 PPPPPPPPPP 774
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/74 (28%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Frame = +2
Query: 425 PPKXGGXP--PXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXGGGX 598
PP G P PP P P GAP PP G P PP + G
Sbjct: 507 PPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAV 566
Query: 599 XXXXXKKKKXXPPP 640
PPP
Sbjct: 567 AGLKSVPGGPPPPP 580
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +1
Query: 907 APPPPXXPPXXPRXXGGPRPPXXHXKKKXXXXGGXGXPXXTPXXLL 1044
APPPP P P G P PP GG P P LL
Sbjct: 519 APPPPPMPGMAPLSTGAPTPPP--PPPVGMANGGPPPPPPLPLDLL 562
Score = 28.7 bits (61), Expect = 7.6
Identities = 24/99 (24%), Positives = 26/99 (26%)
Frame = +2
Query: 428 PKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXGGGXXXX 607
P G P PP P AP P G + +P PP G
Sbjct: 494 PSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGG--- 550
Query: 608 XXKKKKXXPPPXXXXGXXNXXXXXXXXXXGGXGXPPPPP 724
PPP GG PPPPP
Sbjct: 551 ------PPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPP 583
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = +2
Query: 425 PPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGG---GXVXFXSPXXPP 568
P G PP P G PP F G P P GG F +P PP
Sbjct: 68 PVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +2
Query: 413 IXXSPPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXG 589
+ +P + G P PP GP P F P PP GG P PP G
Sbjct: 172 VDGTPGEIGPPGPPAPP-GPDPHSL-FPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAG 228
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +2
Query: 413 IXXSPPKXGGXPPXFPPXGPPPXKXXFXXGAPXXXPPXGGGXVXFXSPXXPPXXXNKXG 589
+ +P + G P PP GP P F P PP GG P PP G
Sbjct: 153 VDGTPGEIGPPGPPAPP-GPDPHSL-FPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAG 209
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 529 PGGGGXXWGXPXKXXFXGGGXXGGKXXGXXPPFGGG 422
PGGGG G GGG G+ PP+GGG
Sbjct: 188 PGGGGGGMGGGGGSGGSGGG--SGRFPPPPPPYGGG 221
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.5 bits (63), Expect = 4.3
Identities = 18/55 (32%), Positives = 21/55 (38%)
Frame = -2
Query: 564 GXXGEXKXTXPPPXGGXFXGAPXKKXIFXGGGPXGGKXGGXPPXLGGEXXIPXPP 400
G GE + PP G GAP GP G PP + G+ P PP
Sbjct: 218 GAPGEPGDSGPPGPPGP-PGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPP 271
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 781 GGGGXPXPPPXPLGXXXXXGXGG 713
GGGG PPP P G G GG
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGG 65
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 781 GGGGXPXPPPXPLGXXXXXGXGG 713
GGGG PPP P G G GG
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGG 89
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 781 GGGGXPXPPPXPLGXXXXXGXGG 713
GGGG PPP P G G GG
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGG 65
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 781 GGGGXPXPPPXPLGXXXXXGXGG 713
GGGG PPP P G G GG
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGG 89
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 5.7
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -1
Query: 595 PPPXFVXXXXGXXXGXKXDXPPPGGGGXXWGXPXKXXFXGGGXXGGKXXGXXPPFGGGXX 416
PP F+ G GGGG G GGG G G GGG
Sbjct: 766 PPSDFIDIPNDPTLGGPTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGG 825
Query: 415 N 413
N
Sbjct: 826 N 826
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 517 PPXRGGGCXFXLPXXPPXXXXQXGGGGL 600
P GGGC P PP GGGGL
Sbjct: 20 PSGGGGGCGCAPPPPPPSPCGCGGGGGL 47
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 528 PXGGXFXGAPXKKXIFXGGGPXGG 457
P GG + GAP + G GP GG
Sbjct: 109 PIGGGYGGAPIGGGSYAGAGPIGG 132
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.1 bits (62), Expect = 5.7
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 526 GGGGXXWGXPXKXXFXGGGXXGGKXXGXXPPFGG 425
GGGG WG P + G G GG G +GG
Sbjct: 223 GGGGGGWGGPAQRG--GPGAYGGPGGGGQGGYGG 254
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.1 bits (62), Expect = 5.7
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 526 GGGGXXWGXPXKXXFXGGGXXGGKXXGXXPPFGG 425
GGGG WG P + G G GG G +GG
Sbjct: 185 GGGGGGWGGPAQRG--GPGAYGGPGGGGQGGYGG 216
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.1 bits (62), Expect = 5.7
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 526 GGGGXXWGXPXKXXFXGGGXXGGKXXGXXPPFGG 425
GGGG WG P + G G GG G +GG
Sbjct: 223 GGGGGGWGGPAQRG--GPGAYGGPGGGGQGGYGG 254
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 904 PAPPPPXXPPXXPRXXGGPRPP 969
P+PPPP PP P P PP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPP 1357
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.7 bits (61), Expect = 7.6
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = -2
Query: 564 GXXGEXKXTXPPPXGGXFXGAPXKKXIFXGGGPXGGKXGGXPPXLGGEXXIPXPP 400
G GE + PP G GAP GP G PP G+ P PP
Sbjct: 213 GAPGEPGDSGPPGPPGP-PGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPP 266
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 904 PAPPPPXXPPXXPRXXGGPRPPXXH 978
P PPPP PP P P PP H
Sbjct: 134 PPPPPPHYPPPPPHYP--PPPPAPH 156
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.7 bits (61), Expect = 7.6
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = -2
Query: 564 GXXGEXKXTXPPPXGGXFXGAPXKKXIFXGGGPXGGKXGGXPPXLGGEXXIPXPP 400
G GE + PP G GAP GP G PP G+ P PP
Sbjct: 213 GAPGEPGDSGPPGPPGP-PGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPP 266
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.3 bits (60), Expect = 10.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 523 GGGXXWGXPXKXXFXGGGXXGGKXXGXXPPFGGG 422
GGG WG GGG GG G GGG
Sbjct: 76 GGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGG 109
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 10.0
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 565 GXXXGXKXDXPPPGGGGXXWGXPXKXXFXGGGXXGGKXXG 446
G G PP GG WG GGG GG G
Sbjct: 138 GGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGG 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,749,134
Number of Sequences: 27780
Number of extensions: 342026
Number of successful extensions: 3424
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2759
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2887577688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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