Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_D22
(1260 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 49 1e-06
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 44 4e-05
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 41 3e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 40 7e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 0.001
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 39 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.003
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 37 0.005
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.016
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.11
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 0.23
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 3.1
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 4.1
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 27 5.5
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 7.2
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 26 9.5
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 9.5
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 49.2 bits (112), Expect = 1e-06
Identities = 27/55 (49%), Positives = 27/55 (49%)
Frame = -2
Query: 1172 GGRGGXXRXGGGXGXGXAGRXXGGRGGGXGGXXGXXSGGRXGXXGGGXGXXGGXG 1008
G RGG GG G G G G RGGG GG G GGR G GG G GG G
Sbjct: 13 GSRGGRGGFNGGRG-GFGGGRGGARGGGRGGARG-GRGGRGGARGGRGGSSGGRG 65
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/55 (47%), Positives = 26/55 (47%)
Frame = -2
Query: 1172 GGRGGXXRXGGGXGXGXAGRXXGGRGGGXGGXXGXXSGGRXGXXGGGXGXXGGXG 1008
GGRGG R G G G G GGRGG GG G GGR G G G G G
Sbjct: 9 GGRGGS-RGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = -2
Query: 1151 RXGGGXGXGXAGRXXGGRGGGXGGXXGXXSGGRXGXXGGGXGXXGGXG 1008
R G G G G GGRGG GG G GGR G GG G G G
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG 55
Score = 44.8 bits (101), Expect = 3e-05
Identities = 26/46 (56%), Positives = 26/46 (56%)
Frame = -2
Query: 1172 GGRGGXXRXGGGXGXGXAGRXXGGRGGGXGGXXGXXSGGRXGXXGG 1035
GGRGG GGG G GR GGRGG GG G SGGR G GG
Sbjct: 30 GGRGGAR--GGGRGGARGGR--GGRGGARGG-RGGSSGGRGGAKGG 70
Score = 44.0 bits (99), Expect = 4e-05
Identities = 27/53 (50%), Positives = 27/53 (50%)
Frame = -2
Query: 1172 GGRGGXXRXGGGXGXGXAGRXXGGRGGGXGGXXGXXSGGRXGXXGGGXGXXGG 1014
GGRGG GGG G G G GG GG GG G GGR G GG G GG
Sbjct: 23 GGRGGF---GGGRG-GARGGGRGGARGGRGG-RGGARGGRGGSSGGRGGAKGG 70
Score = 37.5 bits (83), Expect = 0.004
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = -2
Query: 1178 G*GGRGGXXRXGGGXGXGXAGRXXGGRGGGXGGXXGXXSGGR 1053
G GG G R G G G G GGRGG GG G G +
Sbjct: 31 GRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 44.0 bits (99), Expect = 4e-05
Identities = 27/61 (44%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = -2
Query: 1178 G*GGRGGXXRXGGGXGXGXAG--RXXGGRGGGXGGXXGXXSG--GRXGXXGGGXGXXGGX 1011
G GG G GG G G G GG GGG GG G G G G GGG G GG
Sbjct: 212 GFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Query: 1010 G 1008
G
Sbjct: 272 G 272
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/52 (42%), Positives = 22/52 (42%)
Frame = -2
Query: 1163 GGXXRXGGGXGXGXAGRXXGGRGGGXGGXXGXXSGGRXGXXGGGXGXXGGXG 1008
GG GGG G G G GG GG G GG G GG G GG G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGE-GHHHGGHGGFGGGPGGFEGGPG 238
Score = 31.5 bits (68), Expect = 0.25
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -2
Query: 1151 RXGGGXGXGXAGRXXGGRGGGXGGXXGXXS-GGRXGXXGGGXGXXGGXG 1008
R G G G G GG G GG G GG GG G GG G
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG 231
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 41.1 bits (92), Expect = 3e-04
Identities = 24/59 (40%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = -2
Query: 1184 REG*GGRGGXXRXGGGXGXGXAGRXXGGRGGGXGGXXGXXSGGRXGXXGGG--XGXXGG 1014
R G GRGG GG G G RGG GG G GG G GG G GG
Sbjct: 131 RNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 37.5 bits (83), Expect = 0.004
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = -2
Query: 1142 GGXGXGXAGRXXGGRGGGXGGXXGXXSGGRXGXXGGGXGXXGGXG 1008
G G G G GGRGG GG G GG G GG G G
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 29.9 bits (64), Expect = 0.77
Identities = 19/41 (46%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = -2
Query: 1172 GGRGGXXRXG--GGXGXGXAGRXXGG-RGGGXGGXXGXXSG 1059
GG GG R G GG G G GG RGG GG G G
Sbjct: 152 GGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 39.9 bits (89), Expect = 7e-04
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 7/51 (13%)
Frame = +1
Query: 1015 PPXXPXPP-PXXPXRPPLFXPXXPPXPPPRP------PXXRPAXPXPXPPP 1146
PP P PP P RPP P P PPP P P P P PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +1
Query: 1015 PPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
PP PPP PP+ PP P PP +PA P PP
Sbjct: 144 PPRPSIPPPSPASAPPI-PSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 33.1 bits (72), Expect = 0.083
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = +1
Query: 991 APRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRP---PXXRPAXPXPXPP 1143
AP R PP PP PP+ PP P P P P+ P PP
Sbjct: 143 APPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Score = 30.7 bits (66), Expect = 0.44
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 1015 PPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
PP PP PP P P PP P A P P PP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVP-PMPP 199
Score = 29.9 bits (64), Expect = 0.77
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 1084 PXPPPRPPXXRPAXPXPXPP 1143
P PPP PP PA P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/53 (30%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = +1
Query: 991 APRRXXPXPPXXPX-PPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPPP 1146
+P P P P P P P PP P P P P PPP
Sbjct: 153 SPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/49 (44%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 1009 PXPPXX--PXPPPXX-PXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPPP 1146
P PP P P P P PP PP PPP PP A P P PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP-PPGVAGAGPPPPPPP 781
Score = 33.9 bits (74), Expect = 0.048
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +1
Query: 991 APRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPP 1107
AP P P PPP P PP PP PPP PP
Sbjct: 747 APIPVPPPAPIMGGPPPPPP--PPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.25
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 1033 PPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPPP 1146
PPP P P P PPP P P P P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGP--PPPPPPP 768
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +1
Query: 1018 PXXPXPPPXXPXRPPLFXPXXPPXP---PPRPPXXRPAXPXPXPPP 1146
P P P P P P PP P P PP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPX--PPPRPPXXRPAXPXP 1134
P+ P PP P P P PP+ P PP PPP P P+ P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPM--PAGPPSAPPPPLPASSAPSVPNP 1746
Score = 33.9 bits (74), Expect = 0.048
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 1018 PXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
P P PP P PP P P PP PP PA P P
Sbjct: 1705 PTPPPPPMSVP--PPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 33.1 bits (72), Expect = 0.083
Identities = 21/55 (38%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +1
Query: 991 APRRXXPXPPXXPX---PPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPPP 1146
AP PP P PP PP P P PP PP PA P PPP
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPTPPP-PPMSVPPPPSAPP--MPAGPPSAPPP 1733
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +1
Query: 991 APRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPPP 1146
AP P P PP P PPL P P PP PP P P P P
Sbjct: 435 APPSLPMGAPAAPPLPPSAPIAPPL--PAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 36.3 bits (80), Expect = 0.009
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +1
Query: 1033 PPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
P P P PP P PP PP P PA P P PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP-PLPP 451
Score = 35.1 bits (77), Expect = 0.021
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +1
Query: 1018 PXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXP-XPXPPP 1146
P P PP P PP P PP P P P P P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 34.3 bits (75), Expect = 0.036
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +1
Query: 1009 PXPPXXPXP-PPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPPP 1146
P PP P PP P P P P PP PP A P P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
Score = 33.9 bits (74), Expect = 0.048
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Frame = +1
Query: 1015 PPXXPXPPPXXPXRPPLFXPXXPPXPPPRP-----PXXRPAXPXPXPP 1143
P P PP P P+ P PP PP P P PA P P PP
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP-PLPP 471
Score = 33.1 bits (72), Expect = 0.083
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = +1
Query: 991 APRRXXPXPPXXPXPPPXXPXRPPL--FXPXXPPXPP--PRPPXXRPAXPXPXPPP 1146
AP P P P P P PPL P PP P P P PA P P P P
Sbjct: 427 APPSLPPSAP--PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 32.3 bits (70), Expect = 0.15
Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = +1
Query: 1009 PXPPXXPXPPPXX---PXRPPLFXPXXPPXPPPRPPXXRPAXP 1128
P PP P PP P PPL P P PPP P PA P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPL--PPAAPAPPP-APAPAPAAP 487
Score = 30.3 bits (65), Expect = 0.59
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +1
Query: 1027 PXPPPXXPXRPPLFXPXXP-PXPPPRPPXXRPAXPXPXPPPXR 1152
P PP RPP P P PPP PP P P R
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPR 273
Score = 30.3 bits (65), Expect = 0.59
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPPP 1146
P+ PP P P +PP PP PP P P PP
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 30.3 bits (65), Expect = 0.59
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +1
Query: 1009 PXPPXXPXPPPXXPXRPPLFXPXXPPXPP-PRPPXXRPAXPXPXPP 1143
P P P P PPL PP P PP P+ P PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 29.9 bits (64), Expect = 0.77
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +1
Query: 1015 PPXXPXPPPXXPXRPPLFXPXXPPX--PPPRPPXXRPAXPXPXPPPXR 1152
PP P P +PP+ PPP PP A P PP R
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGR 358
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 455 PPPLXGGFXXPXXXPAXXXXXXXXGGXKLPPCXGXXPPPPPPR 583
PP G P G LPP PPPPPPR
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPPP 1146
P P PP P PP P P P P P P PPP
Sbjct: 246 PSLSAPAPPPIP-PPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 121 PPPXPPPXXXXXXXRGESPPK-XXPNFXSPXIXGGGKIPL 237
PPP PPP SPP+ P +P I K PL
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +1
Query: 1015 PPXXPXPPPXXPXR--PPLFXPXXPPXPPP 1098
PP P P P P L P PP PPP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +1
Query: 1039 PXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPPP 1146
P PP+ PP R P P P PPP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 1009 PXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
P PP P P P R P PP PP P + P PP
Sbjct: 231 PIPPSIPSSRP--PERVPSLSAPAPPPIPP-PSNGTVSSPPNSPP 272
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 500
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/35 (51%), Positives = 18/35 (51%)
Frame = -2
Query: 1184 REG*GGRGGXXRXGGGXGXGXAGRXXGGRGGGXGG 1080
R G G RGG GG G G G GGRG G GG
Sbjct: 444 RTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGG 478
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -2
Query: 1115 RXXGGRGGGXGGXXGXXS-GGRXGXXGGGXGXXGG 1014
R GG GG GG G GGR G GG GG
Sbjct: 444 RTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGG 478
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/39 (46%), Positives = 18/39 (46%)
Frame = -2
Query: 1151 RXGGGXGXGXAGRXXGGRGGGXGGXXGXXSGGRXGXXGG 1035
R GGG G G GGRGG G G GGR GG
Sbjct: 444 RTGGGSRGGRGG--FGGRGGFGG--RGGFGGGRGRGRGG 478
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.5 bits (78), Expect = 0.016
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 1072 PXXPPXPPPRPPXXRPAXPXPXPPP 1146
P PP PPP P P+ P P PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 33.1 bits (72), Expect = 0.083
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 1015 PPXXPXPPPXXPXRPPLFXPXXPPXPPPRP 1104
PP P PPP PP F P P PPP P
Sbjct: 5 PPGNPPPPPP----PPGFEPPSQPPPPPPP 30
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.11
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Frame = +1
Query: 991 APRRXXPXP-PXXPXPPPXXPXR--PPLFXPXX--PPXPPPR--PPXXRPAXPXPXPPP 1146
AP P P P PP P PP+ P PP PPP PP +P+ P PP
Sbjct: 1154 APSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 30.7 bits (66), Expect = 0.44
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Frame = +1
Query: 1009 PXPPXXPXPPPXXPXRPPLFXP--XXPPXPPPR---PPXXRPAXPXPXPPP 1146
P P P P PP+ P PP P P PP +PA P PP
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 30.3 bits (65), Expect = 0.59
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +1
Query: 1009 PXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPPP 1146
P P P P PP+ P P P P+ P+ P P P P
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTP-PVPKSSSGAPSAPPPVPAP 1069
Score = 29.5 bits (63), Expect = 1.0
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Frame = +1
Query: 1009 PXPPXXPXPPPXXPXRPPLFXPXX-PPXPPPR---PPXXRPAXPXPXPPP 1146
P P P P PP+ P PP P P PP P+ P P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Frame = +1
Query: 1009 PXPPXXPXPPPXXPXRPPLFXP--XXPPXPPP--RPPXXRPAXPXPXPP 1143
P P P P PP+ P PP PPP PP P+ P P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 28.3 bits (60), Expect = 2.4
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
Frame = +1
Query: 991 APRRXXPXP-PXXPXPP-PXXPXRPPLFXPXX--PPXPPPR--PPXXRPAXPXPXPP 1143
AP P P P PP P PP+ P PP P P PP +P+ P P
Sbjct: 1116 APSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +1
Query: 1009 PXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPPP 1146
P P P P PP+ P P P+P P P P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +1
Query: 1009 PXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPPP 1146
P P P P P PP+ P P P+P P P P P
Sbjct: 1077 PAPSGAP-PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Frame = +1
Query: 1009 PXPPXXPXPPPXXPXRPPLFXP--XXPPXPPP--RPPXXRPAXPXPXPP 1143
P P P P PP+ P PP P P PP +P+ P P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 27.5 bits (58), Expect = 4.1
Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 7/59 (11%)
Frame = +1
Query: 991 APRRXXPXP-PXXPXPPPXXPXR--PPLFXPXX-PPXPPPR---PPXXRPAXPXPXPPP 1146
AP P P P PP P PP+ P PP P P PP P+ P P P
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +1
Query: 1018 PXXPXPPPXXPXRPPLFXPXXPPXPPPR---PPXXRPAXPXPXPPP 1146
P P P P PP PP P P PP P+ P P P
Sbjct: 1179 PPVPKPAAGVPPVPP--PSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Frame = +1
Query: 1009 PXPPXXPXPPPXXPXRPPLFXPXX--PPXPPPR--PPXXRPAXPXPXPP 1143
P P P P PP+ P PP P P PP +P+ P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +1
Query: 1015 PPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
PP P P P P P P PP +P+ P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/68 (22%), Positives = 18/68 (26%)
Frame = +3
Query: 1053 PPXAXXPXXPPXPXXXPPXPSPRGXXXXXXXXXXXXXXXXXXXSXXXSAPXLSXXPPXPP 1232
P + P P PP P+P G + PP PP
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 1233 PXXXXPXP 1256
P P P
Sbjct: 1194 PSEAPPVP 1201
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/44 (31%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +1
Query: 1009 PXPPXXPXPPPXXPXR--PPLFXPXXPPXPPPRPPXXRPAXPXP 1134
P PP PP P PP+ P P P P P+ P
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 26.2 bits (55), Expect = 9.5
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +1
Query: 991 APRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPPP 1146
AP P P P P PP+ P P P P+P P P P P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGV-PPVPPPSEAP-PVPKPSVGVPPVPPPSTAP 1217
Score = 26.2 bits (55), Expect = 9.5
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 7/53 (13%)
Frame = +1
Query: 1009 PXPPXXPXPPPXXPXR--PPLFXPXX-PPXPPPR---PPXXRP-AXPXPXPPP 1146
P PP PP P PP+ P PP P P PP P A P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect(2) = 0.23
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 1015 PPXXPXPPPXXPXRPPLFXPXXPPXPPPRPP 1107
PP PP L PP PPP PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 24.2 bits (50), Expect(2) = 5.0
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXP 1050
P++ P P P PPP P
Sbjct: 229 PKQADPLPAPPPPPPPTLP 247
Score = 23.8 bits (49), Expect(2) = 0.23
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 1081 PPXPPPRPPXXRPAXPXPXPPP 1146
P PP P P P PPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPP 242
Score = 21.0 bits (42), Expect(2) = 5.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 1072 PXXPPXPPPRPP 1107
P P PPRPP
Sbjct: 275 PPATPSQPPRPP 286
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +1
Query: 1033 PPPXXPXRPPLFXPXXP-PXPPPRPPXXRPAXPXPXPPP 1146
P P P P P P P PP P P P P PP
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPP 140
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXP 1134
P P P P P P PPL P P P P P P P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPL-PNEPVP 147
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
P P PP P P PP+ PPP P P P PP
Sbjct: 203 PGEHMPPPPMHHKPGEHMPP-PPMHHEPGEHMPPP-PMHHEPGEHMPPPP 250
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
P P PP P P PP+ PPP P P P PP
Sbjct: 216 PGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPP-PMHHEPGEHMPPPP 263
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
P P PP P P PP+ PPP P P P PP
Sbjct: 229 PGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPP-PMHHEPGEHMPPPP 276
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
P P PP P P PP+ PPP P P P PP
Sbjct: 242 PGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPP-PMHHEPGEHMPPPP 289
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
P P PP P P PP+ PPP P P P PP
Sbjct: 255 PGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPP-PMHHEPGEHMPPPP 302
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
P P PP P P PP+ PPP P P P PP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPP-PMHHEPGEHMPPPP 315
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
P P PP P P PP+ PPP P P P PP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPP-PMHHEPGEHMPPPP 328
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXPP 1143
P P PP P P PP+ PPP P P P PP
Sbjct: 294 PGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPP-PMHHEPGEHMPPPP 341
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -2
Query: 1172 GGRGGXXRXGGGXGXGXAGRXXGGRGGGXGGXXGXXSG 1059
GGRGG GG G AG R G GG G G
Sbjct: 128 GGRGGRYGSSGGRG---AGDTVVSRSSGAGGARGRRFG 162
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +1
Query: 1015 PPXXPXPP-PXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXPXP 1140
PP P PP P P P L P PP P P P P
Sbjct: 500 PPGVPLPPIPGAPGMPNLNMSQPPMVPPGM--ALPPGMPAPFP 540
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +1
Query: 994 PRRXXPXPPXXPXPPPXXPXRPPLFXPXXPPXPPPRPPXXRPAXPXP 1134
PR P PP PP+ P PP R P P
Sbjct: 428 PRTSSPLASNAENKPPVAQQSPPVLLPTLPPIQTTTIQTSREVAPPP 474
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = +1
Query: 1009 PXPPXXPXPP--PXXPXRPPLFXPXXPPXPP 1095
P P P PP P P L P PP PP
Sbjct: 674 PEVPSVPQPPAVPVVPEAGQLNEPVVPPLPP 704
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.152 0.537
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,328,168
Number of Sequences: 5004
Number of extensions: 32316
Number of successful extensions: 502
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 683589232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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