Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_D21
         (879 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             28   0.13 
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    23   4.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 124 PPARASLNYPRTLLTKTSRRNCTTASSPATTT 219
           PPA +S + P T+ T T+    TTA++ AT T
Sbjct: 96  PPA-SSTSLPATITTTTTTTTTTTATAAATAT 126


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 552 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 647
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 552 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 647
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 552 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 647
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 552 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 647
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 552 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 647
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 552 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 647
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 552 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 647
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,035
Number of Sequences: 438
Number of extensions: 4437
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)