Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_D17
(990 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 47 5e-06
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 39 0.001
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.028
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 33 0.082
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.14
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 29 0.24
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 1.6
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 24 4.2
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 5.4
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 5.4
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 7.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 9.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 46.8 bits (106), Expect = 5e-06
Identities = 18/26 (69%), Positives = 18/26 (69%)
Frame = +3
Query: 750 PPPPPPPPXXXXGGXXXPPPPPPPPP 827
PPPPPPPP G PPPPPPPPP
Sbjct: 761 PPPPPPPPGVAGAG---PPPPPPPPP 783
Score = 35.9 bits (79), Expect = 0.009
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +3
Query: 753 PPPPPPPXXXXGGXXXPPPPPPPP 824
P P PPP GG PPPPPPPP
Sbjct: 748 PIPVPPPAPIMGG---PPPPPPPP 768
Score = 33.9 bits (74), Expect = 0.036
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 750 PPPPPPPPXXXXGGXXXPPPPPPPPP 827
PPPPPPPP GG P P P
Sbjct: 776 PPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 30.7 bits (66), Expect = 0.33
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 753 PPPPPPPXXXXGGXXXPPPPPPPPP 827
PPPPPP P P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 29.1 bits (62), Expect = 1.0
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -3
Query: 610 PPPXXXKXKKKXXPPPPXXXGGGGXXPPXXP 518
PPP PPPP G G PP P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -3
Query: 613 PPPPXXXKXKKKXXPPPPXXXGGGGXXPPXXP 518
P PP PPPP G G PP P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 572 PPPPXXXGGGGXXPPXXXXPP 510
PPPP G G PP PP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP 782
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 622 GGAPPPPXXXKXKKKXXPPPP 560
GG PPPP PPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPP 779
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 39.1 bits (87), Expect = 0.001
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = +3
Query: 750 PPPPPPPPXXXXGGXXXPPPPPPPPP 827
PPPPPPPP G P PPPPPP
Sbjct: 9 PPPPPPPP-----GFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 622 GGAPPPPXXXKXKKKXXPPPPXXXG 548
G PPPP + PPPP G
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPG 31
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Frame = +3
Query: 750 PPPPPPPPXXXXGGXXXPP----PPPPPPP 827
PPPPPPP G PP PPPPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 35.1 bits (77), Expect = 0.015
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 7/33 (21%)
Frame = +3
Query: 750 PPPPPPP-------PXXXXGGXXXPPPPPPPPP 827
PPPPPPP P G PPPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 9/33 (27%)
Frame = +3
Query: 756 PPPPPPXXXXGGXXXPPP---------PPPPPP 827
PPPPPP PPP PP PPP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 753 PPPPPPPXXXXGGXXXPPPPPPPP 824
P PPP P G PP PP P
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 9/33 (27%)
Frame = +3
Query: 753 PPPPPPPXXXXGGXXXPP---------PPPPPP 824
PPPPPP G PP PP PPP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = -3
Query: 625 GGGAPPPPXXXKXKKKXXPPPPXXXGGGGXXPPXXP 518
G APPPP PPP PP P
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 9/35 (25%)
Frame = +3
Query: 750 PPPPP---------PPPXXXXGGXXXPPPPPPPPP 827
PPPPP PPP PP PPP P
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Frame = +3
Query: 750 PPPPPPPPXXXXG--GXXXPPPPPPPPP 827
PP PPP PPPPPPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPP 317
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +3
Query: 750 PP--PPPPPPXXXXGGXXXPPPPPPPP 824
PP PP PP G PP PP P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAP 454
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.5 bits (63), Expect(2) = 0.028
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 801 PPPPPPPPP 827
PPPPPPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 27.9 bits (59), Expect(2) = 0.17
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 750 PPPPPPPPXXXXGGXXXPPP 809
PPPPPPPP G P
Sbjct: 946 PPPPPPPPLVSAAGGKFVSP 965
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 750 PPPPPPPP 773
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 23.4 bits (48), Expect(2) = 0.028
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 750 PPPPPPPP 773
P PPPPPP
Sbjct: 905 PTPPPPPP 912
Score = 23.4 bits (48), Expect(2) = 2.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 801 PPPPPPPP 824
P PPPPPP
Sbjct: 905 PTPPPPPP 912
Score = 22.6 bits (46), Expect(2) = 2.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 804 PPPPPPPP 827
PPPPPP P
Sbjct: 907 PPPPPPLP 914
Score = 22.2 bits (45), Expect(2) = 0.17
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 738 FXXXPPPPPP 767
F PPPPPP
Sbjct: 944 FPPPPPPPPP 953
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 32.7 bits (71), Expect = 0.082
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 753 PPPPPPPXXXXGGXXXPPPPPPPPP 827
PP P PPPPPPPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 30.7 bits (66), Expect = 0.33
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Frame = +3
Query: 750 PPPPPPPPXXXXGGXXXP----PPPPPPPP 827
PPP PP P PPPPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 29.9 bits (64), Expect = 0.58
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 750 PPPPPPPPXXXXGGXXXPPPPPPPP 824
PP P PPPPPPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 29.1 bits (62), Expect = 1.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 756 PPPPPPXXXXGGXXXPPPPPPPPP 827
P PP P PPPPPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.14
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = +3
Query: 750 PPPPP---PPPXXXXGGXXXPPPPPPPP 824
PPPPP PPP PP PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.7 bits (66), Expect = 0.33
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = +3
Query: 750 PPPP---PPPPXXXXGGXXXPPPPPPPPP 827
PPPP PPPP P PPPP P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = +3
Query: 753 PPPPP---PPXXXXGGXXXPPPPPPPPP 827
PPPPP PP PP PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.3 bits (60), Expect = 1.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 753 PPPPPPPXXXXGGXXXPPPPPPPP 824
P PPPPP PP P PP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPP 1728
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 29.5 bits (63), Expect = 0.77
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 801 PPPPPPPPP 827
PPPPPPPPP
Sbjct: 306 PPPPPPPPP 314
Score = 28.3 bits (60), Expect(2) = 0.24
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 765 PPPXXXXGGXXXPPPPPPPP 824
P G PPPPPPPP
Sbjct: 295 PSSGDSANGGLPPPPPPPPP 314
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 750 PPPPPPPPXXXXGGXXXPPPP 812
PPPPPPPP P P
Sbjct: 307 PPPPPPPPSNDFWKDSNEPAP 327
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 750 PPPPPPPP 773
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 21.4 bits (43), Expect(2) = 0.24
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 810 PPPPPPXXXXXXFF 851
PPPPPP F+
Sbjct: 306 PPPPPPPPPSNDFW 319
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 9.4
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 750 PPPPPPPPXXXXGGXXXPPP 809
P PPPPPP PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 23.4 bits (48), Expect(2) = 1.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 801 PPPPPPPP 824
P PPPPPP
Sbjct: 3 PAPPPPPP 10
Score = 23.4 bits (48), Expect(2) = 1.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 804 PPPPPPPP 827
PPPPPP P
Sbjct: 5 PPPPPPAP 12
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 23.8 bits (49), Expect(2) = 4.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 750 PPPPPPPPXXXXGG 791
PPPPPP P G
Sbjct: 240 PPPPPPRPSQPTSG 253
Score = 21.4 bits (43), Expect(2) = 4.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 738 FXXXPPPPPPPP 773
F PPPPPP
Sbjct: 234 FSSSSTPPPPPP 245
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 750 PPPPPPPP 773
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 801 PPPPPPPP 824
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 804 PPPPPPPP 827
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 750 PPPPPPPP 773
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 801 PPPPPPPP 824
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 804 PPPPPPPP 827
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 18/43 (41%)
Frame = +3
Query: 750 PPPP---------PPPPXXXXGGXXXPPPP---------PPPP 824
PPPP PPPP G PPPP PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 18/43 (41%)
Frame = +3
Query: 750 PPPP---------PPPPXXXXGGXXXPPPP---------PPPP 824
PPPP PPPP G PPPP PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 18/43 (41%)
Frame = +3
Query: 750 PPPP---------PPPPXXXXGGXXXPPPP---------PPPP 824
PPPP PPPP G PPPP PPPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 18/43 (41%)
Frame = +3
Query: 750 PPPP---------PPPPXXXXGGXXXPPPP---------PPPP 824
PPPP PPPP G PPPP PPPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -3
Query: 625 GGGAPPPPXXXKXKKKXXPPPPXXXGGGGXXPP 527
G PPPP K + PPP G PP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPP 236
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 9/30 (30%)
Frame = +3
Query: 762 PPPPXXXXGGXXXPPPP---------PPPP 824
PPPP G PPPP PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 750 PPPPPPPPXXXXGGXXXPPPPPPP 821
P PP P G PPP P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +3
Query: 750 PPPP--PPPPXXXXGGXXXPPPPPPPP 824
PPP PP P G PPP PP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,705,784
Number of Sequences: 5004
Number of extensions: 24563
Number of successful extensions: 427
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 511279616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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