Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_D14
(907 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 81 3e-16
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 41 2e-04
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 39 0.001
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.008
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 35 0.014
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.042
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.042
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.056
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.074
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 32 0.097
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 31 0.17
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 31 0.17
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.39
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 30 0.39
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.39
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.52
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 29 1.2
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 28 2.1
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 27 3.7
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 27 4.8
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 26 6.4
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.4
SPBC1685.02c |rps1202|rps12-2|40S ribosomal protein S12|Schizosa... 26 6.4
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 8.5
SPCC962.04 |rps1201|rps12-1, rps12|40S ribosomal protein S12|Sch... 26 8.5
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 80.6 bits (190), Expect = 3e-16
Identities = 49/112 (43%), Positives = 56/112 (50%)
Frame = +3
Query: 186 DEEVAALVVDNGSGMCKAGFAGDDAPRRRVPLDRGKAPPSGRDGRYGTXGLLCRR*GTEX 365
+EE+AALV+DNGSGMCKAGFAGDDAPR P G+ G G +
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGD-EAQS 60
Query: 366 KRYPDPSKYPIEXGIVPNWDDWXXFGXXPST*XCVFPPQEXPXLAXEGPXHP 521
KR KYPIE GIV NWDD P+E P L E P +P
Sbjct: 61 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNP 112
Score = 75.4 bits (177), Expect = 1e-14
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +1
Query: 268 AVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSXRGILT 381
AVFPSIVGRPRH G+MVGMG KDSYVGDEAQS RGILT
Sbjct: 29 AVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILT 66
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 41.1 bits (92), Expect = 2e-04
Identities = 34/106 (32%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Frame = +3
Query: 204 LVVDNGSGMCKAGFAGDDAPRRRVPLDRGKAPPSGRDGRYGTXGLLCRR*GTEXKRYPDP 383
+ +DNGSG KAGFAGDD P+ P G+ + G+E +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFV---GSEAQNLRGL 68
Query: 384 SKY--PIEXGIVPNWDDW-XXFGXXPST*XCVFPPQEXPXLAXEGP 512
K PIE GI+ NW D + S P+E P L E P
Sbjct: 69 LKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPP 114
Score = 40.7 bits (91), Expect = 3e-04
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 271 VFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSXRGIL 378
+FP+ VGR +H+ VM KD +VG EAQ+ RG+L
Sbjct: 34 LFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLL 69
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 38.7 bits (86), Expect = 0.001
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = +3
Query: 192 EVAALVVDNGSGMCKAGFAGDDAPRRRVPLDRGKAPPSGRDGRYGTXGLLCRR*GTEXK- 368
E A +V+DNG+G K G+A D+ PR + P G+ P + + G + G E +
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGR-PILRAEEKTGNVQIKDVMVGDEAEA 60
Query: 369 -RYPDPSKYPIEXGIVPNWDDWXXFGXXPST*XCVFPPQEXPXLAXEGPXHP 521
R KYP+E GI+ ++++ P+ L E P +P
Sbjct: 61 VRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNP 112
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.9 bits (79), Expect = 0.008
Identities = 24/65 (36%), Positives = 24/65 (36%)
Frame = -1
Query: 859 PAXGGGXGKXGXGGXGGDFXXGGVXGGXPXGRXXNXKGGGGGXXXLFXKWAPGFGXTPVX 680
P GG G G GG G G GG P G GG GG F GFG P
Sbjct: 202 PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG-FEGGPGGFGGGPGGFGGGLGGFGGGPGG 260
Query: 679 GGAXP 665
G P
Sbjct: 261 FGGGP 265
Score = 33.5 bits (73), Expect = 0.042
Identities = 31/83 (37%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Frame = -3
Query: 815 GGGFXX-GGGXGGXPPXXXPXPXRGXGGXXXPFXKMG--PGFWXNPXXRGCXXXXTRGVX 645
GGGF GGG GG PP P G GG G GF P G G
Sbjct: 187 GGGFGGFGGGSGGPPP--GPGGFGGFGGFGGEGHHHGGHGGFGGGP---GGFEGGPGGFG 241
Query: 644 TXSGGQGXG-XXXGRGXGXWGGG 579
GG G G G G G +GGG
Sbjct: 242 GGPGGFGGGLGGFGGGPGGFGGG 264
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = -2
Query: 864 FXPXGGGGXERXXXXGGGGILXGGGXXGGAPXXGXXTXKGXGGGXXXFXKNGPRVLGKPX 685
F GG G E G GG G G G P G GGG F G P
Sbjct: 207 FGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPG 266
Query: 684 SPGVP 670
G P
Sbjct: 267 GHGGP 271
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 35.1 bits (77), Expect = 0.014
Identities = 32/112 (28%), Positives = 45/112 (40%)
Frame = +3
Query: 189 EEVAALVVDNGSGMCKAGFAGDDAPRRRVPLDRGKAPPSGRDGRYGTXGLLCRR*GTEXK 368
+EV+A+V+D GS + GF+G+D P+ +P G+ R +G + G E K
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRR--LFGEEYIYKSNPGMEIK 66
Query: 369 RYPDPSKYPIEXGIVPNWDDWXXFGXXPST*XCVFPPQEXPXLAXEGPXHPP 524
I G V NWD P E P L E +PP
Sbjct: 67 N-------AIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPP 111
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.5 bits (73), Expect = 0.042
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +3
Query: 672 APPXTGVXPKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPSPP 848
APP +P R PPP P +P PP P PP P SPP
Sbjct: 129 APPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPI--PSSLPPPAQPAAPVKSPP 185
Score = 29.5 bits (63), Expect = 0.69
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
Frame = +3
Query: 672 APPXTGVXPKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPP-XXKSPPXP---PXPXFP 839
APP P P + PP P +P P PP K+PP P P P P
Sbjct: 123 APPSAPAPPTPQSELRPPTSAPPRPS-----IPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Query: 840 SPP 848
+ P
Sbjct: 178 AAP 180
Score = 29.1 bits (62), Expect = 0.91
Identities = 16/58 (27%), Positives = 18/58 (31%)
Frame = +3
Query: 678 PXTGVXPKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPSPPP 851
P T P+P PP P +P PP P P P PS P
Sbjct: 139 PPTSAPPRPSIP-PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVP 195
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/63 (30%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = +3
Query: 672 APPXTGVXP-KPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPP--XPPXPXFPS 842
APP + P P + PP P P +PP S P PP P
Sbjct: 143 APPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
Query: 843 PPP 851
PPP
Sbjct: 203 PPP 205
Score = 27.1 bits (57), Expect = 3.7
Identities = 30/122 (24%), Positives = 33/122 (27%), Gaps = 1/122 (0%)
Frame = +3
Query: 498 AXEGPXHPPGPXKXXMNPXXXFEXXXTTPPPXXLPPPXPXXXXXXXXXXXXXXXXXGXAP 677
A P P P P + PP +PPP P AP
Sbjct: 120 ASAAPPSAPAPP----TPQSELRPPTSAPPRPSIPPPSP----------ASAPPIPSKAP 165
Query: 678 PXTGVXPKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPSP-PPX 854
P P P A PP P +P P PP P PS P
Sbjct: 166 PIPSSLPPP-AQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Query: 855 AG 860
AG
Sbjct: 225 AG 226
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/39 (33%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Frame = +3
Query: 768 PXGXPPXTPPXXKSPP--XPPXPXFPSPPPXAGXXFXXK 878
P P TP PP PP P P P P + K
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSK 163
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.042
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 735 PPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPSPPPXAG 860
PPPPP P P PP PP P P PP AG
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP--PPPPGVAG 772
Score = 31.5 bits (68), Expect = 0.17
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = +3
Query: 675 PPXTGVXPKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPSPPP 851
PP + P P P PPP + G PP PP + PP P P PPP
Sbjct: 735 PPPAVIVPTPAP-----APIPVPPPAP---IMGGPPPPPPPPGVAGAGPPPP--PPPPP 783
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 9/48 (18%)
Frame = +3
Query: 735 PPPPPX-----XXXXLPXGXPPXTPPXXKSPPXPPXPXF----PSPPP 851
PPPPP P PP P PP PP P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 738 PPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPSPPPXAG 860
PPPP +P P P PP P P PPP G
Sbjct: 732 PPPPPPAVIVP---TPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 577 PPPPHXPXPLPXXXPXPCPP 636
PPPP P P P P PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPP 753
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.056
Identities = 32/121 (26%), Positives = 36/121 (29%), Gaps = 5/121 (4%)
Frame = +3
Query: 510 PXHPPGPXKXXMNPXXXFEXXXTTPPPXXLPPPXPXXXXXXXXXXXXXXXXXGXAP---P 680
P PP P + PPP PPP P P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPP--PPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 681 XTGVXPKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKS--PPXPPXPXFPSPPPX 854
TG P P + P PPP +P P PP + PP P PS PP
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPP----AIPGRSAPALPPLGNASRTSTPPVPTPPSLPPS 426
Query: 855 A 857
A
Sbjct: 427 A 427
Score = 32.3 bits (70), Expect = 0.097
Identities = 34/119 (28%), Positives = 36/119 (30%), Gaps = 5/119 (4%)
Frame = +3
Query: 510 PXHPPGPXKXX-MNPXXXFEXXXTTPPPXXLPPPXPXXXXXXXXXXXXXXXXXGXAPPXT 686
P PP P MNP T+ PP LPPP PP
Sbjct: 268 PNSPPRPIAPVSMNPAIN----STSKPP--LPPPSSRVSAAALAANKKRPPPP--PPPSR 319
Query: 687 GVXPKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPS----PPP 851
KP PPPP G P P +PP PP PS PPP
Sbjct: 320 RNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +3
Query: 684 TGVXPKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXP-XFPSPPP 851
T P P P PP LP G P P +P PP P P+ PP
Sbjct: 412 TSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 29.5 bits (63), Expect = 0.69
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +1
Query: 463 PAFSPPRXPXSWPXRVPXTPQGXXKXX*TPNXXS-KXLXPP-PPHXPXPLPXXXPXPCPP 636
P PP P S P P P P + PP PP P P P P P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Query: 637 L 639
+
Sbjct: 488 V 488
Score = 29.1 bits (62), Expect = 0.91
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Frame = +3
Query: 672 APPXTGVXPKPGAHFXKRXXXP-PPPPXXXXXLPXGXP--PXTPPXXKSPPXPPXPXFPS 842
APP P P PP LP G P P PP +PP P P +
Sbjct: 427 APPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAA 486
Query: 843 P 845
P
Sbjct: 487 P 487
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 735 PPPPPXXXXXLPXGXPPXTP-PXXKSPPXPPXPXFPSPPPXAG 860
P PP LP PP P +PP PP +PP AG
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI-APPLPAG 462
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +3
Query: 474 PPQEXPXLAXEGPXHPPGPXKXXMNPXXXFEXXXTTPPPXXLPPPXP 614
PP P L P PP P + P P P P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +3
Query: 741 PPPXXXXXLPXGXPPXTPPXXKSPPXPP--XPXFPSPPPXA 857
PP LP PP PP +PP P P P PP A
Sbjct: 415 PPVPTPPSLPPSAPPSLPP--SAPPSLPMGAPAAPPLPPSA 453
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 735 PPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXP 830
PP PP +P PP P +P PP P
Sbjct: 230 PPIPPS----IPSSRPPERVPSLSAPAPPPIP 257
Score = 25.8 bits (54), Expect = 8.5
Identities = 23/90 (25%), Positives = 27/90 (30%)
Frame = +1
Query: 367 RGILTPPNTPSNXESSLTGMTGXXLASYLLHXPAFSPPRXPXSWPXRVPXTPQGXXKXX* 546
+G PP P S +S + P PP P +P P G
Sbjct: 356 QGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP--PLGNASRTS 413
Query: 547 TPNXXSKXLXPPPPHXPXPLPXXXPXPCPP 636
TP P PP P P P PP
Sbjct: 414 TPPV------PTPPSLPPSAPPSLPPSAPP 437
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.074
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +3
Query: 690 VXPKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPS 842
V P+ A PPPPP + PP PP PP P P P+
Sbjct: 1692 VRPQSAAPPQMSAPTPPPPP-----MSVPPPPSAPPMPAGPPSAPPPPLPA 1737
Score = 31.9 bits (69), Expect = 0.13
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 744 PPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPSPPP 851
PP P P PP +PP P P PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 735 PPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPSPPPXA 857
PP P P PP PP P P P+ PP A
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSA 1730
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 4/32 (12%)
Frame = +3
Query: 768 PXGXPPXTP----PXXKSPPXPPXPXFPSPPP 851
P PP P P S P PP P PPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPP 1717
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/51 (25%), Positives = 17/51 (33%)
Frame = +3
Query: 678 PXTGVXPKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXP 830
P + P+ A PPP +P G P PP + P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 25.8 bits (54), Expect = 8.5
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +1
Query: 478 PRXPXSWPXRVPXTPQGXXKXX*TPNXXSKXLXPPPPHXPXPLPXXXPXPCPPLXVXTP 654
P P S P P PQ P S PPPP P P P P P P
Sbjct: 1683 PAHPVSTP---PVRPQSA-----APPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 32.3 bits (70), Expect = 0.097
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 204 LVVDNGSGMCKAGFAGDDAP 263
+++DNG+G K G+AG+DAP
Sbjct: 8 IIMDNGTGYSKLGYAGNDAP 27
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +3
Query: 390 YPIEXGIVPNWDDWXXFGXXPST*XCVFPPQEXPXLAXEGPXHPP 524
YPI G + NWD F P++ L E P +PP
Sbjct: 92 YPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPP 136
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 189 EEVAALVVDNGSGMCKAGFAGDDAPRRRVPLDRG-KAPPSGRD 314
EE+ +LV+D GS + G+AG+++P +P G ++ +GR+
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYGVRSDVTGRN 50
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 31.5 bits (68), Expect = 0.17
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +3
Query: 672 APPXTGVXPKPGAH-FXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPSPP 848
APP + P PGA PP LP G P P P P P +PP
Sbjct: 499 APPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPGATAPP 558
Query: 849 PXAG 860
G
Sbjct: 559 GAPG 562
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.39
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 765 LPXGXPPXTPPXXKSPPXPPXPXFPSPPPXAG 860
LP G PP PP PP P P PPP G
Sbjct: 4 LPPGNPPPPPP----PPGFEPPSQPPPPPPPG 31
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 735 PPPPPXXXXXLPXGXPPXTPP 797
PPPPP P PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 735 PPPPPXXXXXLPXGXPPXTPP 797
PPPPP P PP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 30.3 bits (65), Expect = 0.39
Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 9/61 (14%)
Frame = +3
Query: 705 GAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPP---------XPXFPSPPPXA 857
G+ + PPPPP LP PP P PP P P P+P P
Sbjct: 1873 GSDLSNQAAPPPPPPMA---LPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLT 1929
Query: 858 G 860
G
Sbjct: 1930 G 1930
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.39
Identities = 27/96 (28%), Positives = 30/96 (31%), Gaps = 4/96 (4%)
Frame = +3
Query: 582 PPPXXLPPPXPXXXXXXXXXXXXXXXXXGXAPPXTGVXPKPGAHFXKRXXXPPPPPXXXX 761
P P PP P AP +G+ P P P PPP
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPS-SGIPPVPKP---AAGVPPVPPPSEAP 1198
Query: 762 XLPX---GXPPXTPPXXKSP-PXPPXPXFPSPPPXA 857
+P G PP PP P P P P P P A
Sbjct: 1199 PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTA 1234
Score = 29.9 bits (64), Expect = 0.52
Identities = 26/92 (28%), Positives = 28/92 (30%), Gaps = 5/92 (5%)
Frame = +3
Query: 582 PPPXXLPPPXPXXXXXXXXXXXXXXXXXGXAPPXTGVX-PKPGAHFXKRXXXPPPPPXXX 758
P P PP P PP PKP P PPP
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSV-----GVPPVPPPSTA 1216
Query: 759 XXLPX---GXPPXTPPXXKSPPXP-PXPXFPS 842
+P G PP P K+PP P P PS
Sbjct: 1217 PPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
Score = 29.1 bits (62), Expect = 0.91
Identities = 30/131 (22%), Positives = 34/131 (25%), Gaps = 4/131 (3%)
Frame = +3
Query: 477 PQEXPXLAXEGPXHPPGPXKXXMNPXXXFEXXXTTPPPXXLPPPXPXXXXXXXXXXXXXX 656
P P + PP P P P PP P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 657 XXXGXAPPXTGVXPKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSP----PXPP 824
P GV P P PP P +P PP T P +P P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPS------EAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Query: 825 XPXFPSPPPXA 857
P +PP A
Sbjct: 1231 VPTAKAPPVPA 1241
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 738 PPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPSPPP 851
PP P P P TPP KS P P P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +3
Query: 735 PPPPPXXXXXLPXGXPPXTPPXXKSPPXP-PXPXFPSPPPXAG 860
P P P G PP P +PP P P P P +G
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = +3
Query: 675 PPXTGVXPKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXP-PXPXFPSPPP 851
P +G P P K PP P +P G PP P +PP P P P P P
Sbjct: 1115 PAPSGAPPVP-----KPSVAAPPVP-----VPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 26.6 bits (56), Expect = 4.8
Identities = 23/85 (27%), Positives = 23/85 (27%), Gaps = 1/85 (1%)
Frame = +3
Query: 600 PPPXPXXXXXXXXXXXXXXXXXGXAPPXTGVXPKPGAHFXKRXXXPPPPPXXXXXLPXGX 779
PPP P AP PKP PP P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSV------AAPPVPKPSVAVPPVPA 1116
Query: 780 PPXTPPXXK-SPPXPPXPXFPSPPP 851
P PP K S PP P PP
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 26.2 bits (55), Expect = 6.4
Identities = 25/97 (25%), Positives = 27/97 (27%), Gaps = 7/97 (7%)
Frame = +3
Query: 588 PXXLPPPXPXXXXXXXXXXXXXXXXXGXAPPXTGVXPKPGAHFXKRXXXP------PPPP 749
P +PPP P AP V P A + P PP P
Sbjct: 966 PPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVP 1025
Query: 750 XXXXXLPXGXPPXTPPXXKSPPX-PPXPXFPSPPPXA 857
P P T P P PP P S P A
Sbjct: 1026 LPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSA 1062
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/41 (29%), Positives = 14/41 (34%)
Frame = +3
Query: 738 PPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPSPPPXAG 860
PP P P PP P + P P P P +G
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.52
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -1
Query: 850 GGGXGKXGXGGXGGDFXXGGVXGGXPXGRXXNXKGGGG 737
GGG G GG GG G GG GR + G GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 44 IWPSALTNIPRSELGSLRCTAITKLCNSKLIYLF--IIELFN*KLIQDVRRRSCRVGS 211
IWP TN+ + +L K+ N ++ + F II+ N L+Q+V VG+
Sbjct: 107 IWPKGKTNLKVRVVSALALLVAAKILNVQVPFYFKSIIDTMNTTLVQEVGALWSTVGA 164
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/55 (30%), Positives = 20/55 (36%)
Frame = +3
Query: 675 PPXTGVXPKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFP 839
PP T +P A + P PP P PP P S PP P +P
Sbjct: 80 PPYTA---EPEARYNSTIHNPMPPMSQAYRPPPTEPPTVPAYETSSEFPP-PAYP 130
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 204 LVVDNGSGMCKAGFAGDDAPR 266
LV+DNGS +AG+ G+ P+
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPK 47
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/46 (28%), Positives = 16/46 (34%)
Frame = +3
Query: 720 KRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPSPPPXA 857
+R PPP PP +PP P +PPP A
Sbjct: 3 RRRSAAPPPRRAAPARSASTAAALPPRTMAPPPAPSRVQQAPPPTA 48
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +3
Query: 711 HFXKRXXXPPPPPXXXXXLPX-GXPPXTPPXXKSPPXPPXPXFPSPPPXAG 860
H+ P PP +P PP SP P P F P P G
Sbjct: 113 HWPSLKPHPLPPKRVSLGIPSISNPPVDTVISDSPTSPHPPSFVQPHPPYG 163
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +1
Query: 463 PAFSPPRXPXSWPXRVPX-TPQGXXKXX*TPNXXSKXLXPPPPHXPXPLPXXXPXP 627
P++S P P P TP + P+ ++ PPPP P + P P
Sbjct: 100 PSYSQPSQPPKEPALPSRGTPSLPSRPGSRPSVLNQEQVPPPPVRPNVMSQMPPPP 155
>SPBC1685.02c |rps1202|rps12-2|40S ribosomal protein
S12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 148
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 380 VRIPLXLCASSPT*ESXCPIPTITP*WRGLPTIEGNTAARSIISC 246
V++ LCA S T P I W GL ++ + AR ++ C
Sbjct: 80 VKLVEALCAESQTPLVKVADPKILGEWAGLCVLDRDGNARKVVGC 124
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -1
Query: 439 NXXQSSQLGTIPXSMGYLEGSGYLXCSVPHLLHKSPXVPYRPSRP 305
N + + +P Y + +G L + L+ K+P PY SRP
Sbjct: 280 NEGTGTTIPPLPEFNDYFKENG-LNYDIDQLISKAPSYPYSSSRP 323
>SPCC962.04 |rps1201|rps12-1, rps12|40S ribosomal protein
S12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 145
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -3
Query: 380 VRIPLXLCASSPT*ESXCPIPTITP*WRGLPTIEGNTAARSIISC 246
V++ LCA S T P + W GL ++ + AR ++ C
Sbjct: 77 VKLVEALCAESETPLIKVADPKVLGEWAGLCVLDRDGNARKVVGC 121
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,898,812
Number of Sequences: 5004
Number of extensions: 55729
Number of successful extensions: 362
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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