Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_D14
         (907 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       26   0.41 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   5.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   8.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   8.8  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 26.2 bits (55), Expect = 0.41
 Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
 Frame = +3

Query: 678 PXTGVX-PKPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPP 797
           P +G   P+P  H   +      PP      P G PP  PP
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 13/50 (26%), Positives = 15/50 (30%)
 Frame = +3

Query: 699 KPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXPXFPSPP 848
           +PG +       P PP       P   P    P     P PP P     P
Sbjct: 97  EPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREP 146



 Score = 21.8 bits (44), Expect = 8.8
 Identities = 12/44 (27%), Positives = 14/44 (31%)
 Frame = +3

Query: 699 KPGAHFXKRXXXPPPPPXXXXXLPXGXPPXTPPXXKSPPXPPXP 830
           +PG +       P PP       P   P    P     P PP P
Sbjct: 123 EPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHP 166


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 710 GPGFWXNPXXRGC 672
           GPG W +   RGC
Sbjct: 489 GPGKWPHEDKRGC 501


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 710 GPGFWXNPXXRGC 672
           GPG W +   RGC
Sbjct: 579 GPGKWPHEDKRGC 591


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,974
Number of Sequences: 438
Number of extensions: 7343
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)