Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_D11
         (894 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82256-2|CAB05115.1|   62|Caenorhabditis elegans Hypothetical pr...    75   5e-14
AL032657-13|CAB76744.1|   87|Caenorhabditis elegans Hypothetical...    57   2e-08
AL032625-6|CAN86641.1|  167|Caenorhabditis elegans Hypothetical ...    44   1e-04
Z34800-3|CAA84322.2|  722|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z34800-2|CAA84324.2|  842|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ...    28   7.8  
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z82256-2|CAB05115.1|   62|Caenorhabditis elegans Hypothetical
           protein B0513.3 protein.
          Length = 62

 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 33/50 (66%), Positives = 39/50 (78%)
 Frame = +2

Query: 95  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGN 244
           MAKSKNHTNHNQN+KAHRNGI KP+K    S  G+D KF++N RF +K N
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGITKPKKHIFLSMKGVDAKFIKNLRFSRKNN 50


>AL032657-13|CAB76744.1|   87|Caenorhabditis elegans Hypothetical
           protein Y47H9C.14 protein.
          Length = 87

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 25/48 (52%), Positives = 33/48 (68%)
 Frame = +2

Query: 101 KSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGN 244
           K +NHTNHN+N KAHRNGI KP+K    S  G   +F+++ RF +K N
Sbjct: 14  KPENHTNHNRNNKAHRNGITKPKKHIFLSIEGSRRQFIKSLRFFRKNN 61


>AL032625-6|CAN86641.1|  167|Caenorhabditis elegans Hypothetical
           protein Y37H9A.5 protein.
          Length = 167

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +2

Query: 101 KSKNHTNHNQNRKAHRNGIKKPR 169
           KSKNHTNHNQN  AHR GI KP+
Sbjct: 80  KSKNHTNHNQNNTAHRIGITKPK 102


>Z34800-3|CAA84322.2|  722|Caenorhabditis elegans Hypothetical
           protein F45H7.2b protein.
          Length = 722

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +1

Query: 502 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTPGXRR 657
           E    + LF+  +S N QVNN    +        ++++ ++ +++ TPG RR
Sbjct: 398 EALKTLLLFLKEVSRNSQVNNMTAQNLSVCFTPSLFQLGASRLDKVTPGNRR 449


>Z34800-2|CAA84324.2|  842|Caenorhabditis elegans Hypothetical
           protein F45H7.2a protein.
          Length = 842

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +1

Query: 502 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTPGXRR 657
           E    + LF+  +S N QVNN    +        ++++ ++ +++ TPG RR
Sbjct: 518 EALKTLLLFLKEVSRNSQVNNMTAQNLSVCFTPSLFQLGASRLDKVTPGNRR 569


>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
           protein Y47D3B.5b protein.
          Length = 1136

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +3

Query: 45  VASVLSSDSKWIEN--SSKWQSQRIIQIITKTAKLTE 149
           V ++LS   KW+ +  S KWQ  RI   IT+ AK+T+
Sbjct: 270 VLAILSKCGKWMTDSLSEKWQQHRI--QITEKAKMTK 304


>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
           protein Y47D3B.5a protein.
          Length = 1088

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +3

Query: 45  VASVLSSDSKWIEN--SSKWQSQRIIQIITKTAKLTE 149
           V ++LS   KW+ +  S KWQ  RI   IT+ AK+T+
Sbjct: 270 VLAILSKCGKWMTDSLSEKWQQHRI--QITEKAKMTK 304


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,181,838
Number of Sequences: 27780
Number of extensions: 310449
Number of successful extensions: 793
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)