Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_D10
(872 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U44772-1|AAB06236.1| 306|Homo sapiens palmitoyl protein thioest... 123 7e-28
L42809-1|AAA85337.1| 306|Homo sapiens palmitoyl-protein thioest... 123 7e-28
CR542053-1|CAG46850.1| 306|Homo sapiens PPT1 protein. 123 7e-28
BC008426-1|AAH08426.1| 306|Homo sapiens palmitoyl-protein thioe... 123 7e-28
AL512599-16|CAI11026.1| 279|Homo sapiens palmitoyl-protein thio... 123 7e-28
AL512599-15|CAI11025.1| 306|Homo sapiens palmitoyl-protein thio... 123 7e-28
AF022211-1|AAB72224.1| 306|Homo sapiens palmitoyl-protein thioe... 123 7e-28
AL512599-14|CAI11024.1| 177|Homo sapiens palmitoyl-protein thio... 44 7e-04
>U44772-1|AAB06236.1| 306|Homo sapiens palmitoyl protein
thioesterase protein.
Length = 306
Score = 123 bits (297), Expect = 7e-28
Identities = 66/164 (40%), Positives = 86/164 (52%)
Frame = +3
Query: 264 GDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAA 443
GD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA
Sbjct: 42 GDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAK 101
Query: 444 DPKLSNGFNVMGFSQGMSVYSSCSTKMWS*TTTN*KHGVSRRSAPXASMGIPHCGALRHX 623
DPKL G+N MGFSQG + + + S N +S G+P C
Sbjct: 102 DPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMIN---LISVGGQHQGVFGLPRCPGESSH 158
Query: 624 TCDDVXKLLNYAGI*QLGTKIHWFQATYWPDPLNERTYEAXXVF 755
CD + K LN AG + QA YW DP+ E Y +F
Sbjct: 159 ICDFIRKTLN-AGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIF 201
>L42809-1|AAA85337.1| 306|Homo sapiens palmitoyl-protein
thioesterase protein.
Length = 306
Score = 123 bits (297), Expect = 7e-28
Identities = 66/164 (40%), Positives = 86/164 (52%)
Frame = +3
Query: 264 GDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAA 443
GD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA
Sbjct: 42 GDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAK 101
Query: 444 DPKLSNGFNVMGFSQGMSVYSSCSTKMWS*TTTN*KHGVSRRSAPXASMGIPHCGALRHX 623
DPKL G+N MGFSQG + + + S N +S G+P C
Sbjct: 102 DPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMIN---LISVGGQHQGVFGLPRCPGESSH 158
Query: 624 TCDDVXKLLNYAGI*QLGTKIHWFQATYWPDPLNERTYEAXXVF 755
CD + K LN AG + QA YW DP+ E Y +F
Sbjct: 159 ICDFIRKTLN-AGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIF 201
>CR542053-1|CAG46850.1| 306|Homo sapiens PPT1 protein.
Length = 306
Score = 123 bits (297), Expect = 7e-28
Identities = 66/164 (40%), Positives = 86/164 (52%)
Frame = +3
Query: 264 GDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAA 443
GD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA
Sbjct: 42 GDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAK 101
Query: 444 DPKLSNGFNVMGFSQGMSVYSSCSTKMWS*TTTN*KHGVSRRSAPXASMGIPHCGALRHX 623
DPKL G+N MGFSQG + + + S N +S G+P C
Sbjct: 102 DPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMIN---LISVGGQHQGVFGLPRCPGESSH 158
Query: 624 TCDDVXKLLNYAGI*QLGTKIHWFQATYWPDPLNERTYEAXXVF 755
CD + K LN AG + QA YW DP+ E Y +F
Sbjct: 159 ICDFIRKTLN-AGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIF 201
>BC008426-1|AAH08426.1| 306|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 306
Score = 123 bits (297), Expect = 7e-28
Identities = 66/164 (40%), Positives = 86/164 (52%)
Frame = +3
Query: 264 GDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAA 443
GD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA
Sbjct: 42 GDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAK 101
Query: 444 DPKLSNGFNVMGFSQGMSVYSSCSTKMWS*TTTN*KHGVSRRSAPXASMGIPHCGALRHX 623
DPKL G+N MGFSQG + + + S N +S G+P C
Sbjct: 102 DPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMIN---LISVGGQHQGVFGLPRCPGESSH 158
Query: 624 TCDDVXKLLNYAGI*QLGTKIHWFQATYWPDPLNERTYEAXXVF 755
CD + K LN AG + QA YW DP+ E Y +F
Sbjct: 159 ICDFIRKTLN-AGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIF 201
>AL512599-16|CAI11026.1| 279|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 279
Score = 123 bits (297), Expect = 7e-28
Identities = 66/164 (40%), Positives = 86/164 (52%)
Frame = +3
Query: 264 GDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAA 443
GD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA
Sbjct: 71 GDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAK 130
Query: 444 DPKLSNGFNVMGFSQGMSVYSSCSTKMWS*TTTN*KHGVSRRSAPXASMGIPHCGALRHX 623
DPKL G+N MGFSQG + + + S N +S G+P C
Sbjct: 131 DPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMIN---LISVGGQHQGVFGLPRCPGESSH 187
Query: 624 TCDDVXKLLNYAGI*QLGTKIHWFQATYWPDPLNERTYEAXXVF 755
CD + K LN AG + QA YW DP+ E Y +F
Sbjct: 188 ICDFIRKTLN-AGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIF 230
>AL512599-15|CAI11025.1| 306|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 306
Score = 123 bits (297), Expect = 7e-28
Identities = 66/164 (40%), Positives = 86/164 (52%)
Frame = +3
Query: 264 GDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAA 443
GD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA
Sbjct: 42 GDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAK 101
Query: 444 DPKLSNGFNVMGFSQGMSVYSSCSTKMWS*TTTN*KHGVSRRSAPXASMGIPHCGALRHX 623
DPKL G+N MGFSQG + + + S N +S G+P C
Sbjct: 102 DPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMIN---LISVGGQHQGVFGLPRCPGESSH 158
Query: 624 TCDDVXKLLNYAGI*QLGTKIHWFQATYWPDPLNERTYEAXXVF 755
CD + K LN AG + QA YW DP+ E Y +F
Sbjct: 159 ICDFIRKTLN-AGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIF 201
>AF022211-1|AAB72224.1| 306|Homo sapiens palmitoyl-protein
thioesterase protein.
Length = 306
Score = 123 bits (297), Expect = 7e-28
Identities = 66/164 (40%), Positives = 86/164 (52%)
Frame = +3
Query: 264 GDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAA 443
GD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA
Sbjct: 42 GDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAK 101
Query: 444 DPKLSNGFNVMGFSQGMSVYSSCSTKMWS*TTTN*KHGVSRRSAPXASMGIPHCGALRHX 623
DPKL G+N MGFSQG + + + S N +S G+P C
Sbjct: 102 DPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMIN---LISVGGQHQGVFGLPRCPGESSH 158
Query: 624 TCDDVXKLLNYAGI*QLGTKIHWFQATYWPDPLNERTYEAXXVF 755
CD + K LN AG + QA YW DP+ E Y +F
Sbjct: 159 ICDFIRKTLN-AGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIF 201
>AL512599-14|CAI11024.1| 177|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 177
Score = 44.0 bits (99), Expect = 7e-04
Identities = 30/98 (30%), Positives = 40/98 (40%)
Frame = +3
Query: 462 GFNVMGFSQGMSVYSSCSTKMWS*TTTN*KHGVSRRSAPXASMGIPHCGALRHXTCDDVX 641
G+N MGFSQG + + + S N +S G+P C CD +
Sbjct: 3 GYNAMGFSQGGQFLRAVAQRCPSPPMINL---ISVGGQHQGVFGLPRCPGESSHICDFIR 59
Query: 642 KLLNYAGI*QLGTKIHWFQATYWPDPLNERTYEAXXVF 755
K LN AG + QA YW DP+ E Y +F
Sbjct: 60 KTLN-AGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIF 96
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,444,862
Number of Sequences: 237096
Number of extensions: 2389722
Number of successful extensions: 3497
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3465
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -