Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_D08
         (878 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z95116-3|CAI17988.1|  423|Homo sapiens protein ( Human DNA seque...    32   2.4  
CR456407-1|CAG30293.1|  443|Homo sapiens bK984G1.1 protein.            32   2.4  
BC046358-1|AAH46358.1|  443|Homo sapiens EMI domain containing 1...    32   2.4  
AL031186-3|CAI18002.1|  423|Homo sapiens protein ( Human DNA seq...    32   2.4  
AJ416090-1|CAC94777.1|  441|Homo sapiens putative emu1 protein p...    32   2.4  
BC062344-1|AAH62344.1|  256|Homo sapiens PTCHD1 protein protein.       30   9.6  

>Z95116-3|CAI17988.1|  423|Homo sapiens protein ( Human DNA sequence
           from clone CTA-57G9 on chromosome 22q12.1. ).
          Length = 423

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
 Frame = -3

Query: 876 WGXPXRXGXQGXXXSEGKX--EGAPXTQSPLFXPGGXGGXXXXARKTPPXP 730
           WG P   G +G   S G     G P  Q P   PG  G       + PP P
Sbjct: 181 WGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGP 231


>CR456407-1|CAG30293.1|  443|Homo sapiens bK984G1.1 protein.
          Length = 443

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
 Frame = -3

Query: 876 WGXPXRXGXQGXXXSEGKX--EGAPXTQSPLFXPGGXGGXXXXARKTPPXP 730
           WG P   G +G   S G     G P  Q P   PG  G       + PP P
Sbjct: 201 WGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGP 251


>BC046358-1|AAH46358.1|  443|Homo sapiens EMI domain containing 1
           protein.
          Length = 443

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
 Frame = -3

Query: 876 WGXPXRXGXQGXXXSEGKX--EGAPXTQSPLFXPGGXGGXXXXARKTPPXP 730
           WG P   G +G   S G     G P  Q P   PG  G       + PP P
Sbjct: 201 WGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGP 251


>AL031186-3|CAI18002.1|  423|Homo sapiens protein ( Human DNA
           sequence from clone CTA-984G1 on chromosome
           22q12.1-12.2. ).
          Length = 423

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
 Frame = -3

Query: 876 WGXPXRXGXQGXXXSEGKX--EGAPXTQSPLFXPGGXGGXXXXARKTPPXP 730
           WG P   G +G   S G     G P  Q P   PG  G       + PP P
Sbjct: 181 WGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGP 231


>AJ416090-1|CAC94777.1|  441|Homo sapiens putative emu1 protein
           protein.
          Length = 441

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
 Frame = -3

Query: 876 WGXPXRXGXQGXXXSEGKX--EGAPXTQSPLFXPGGXGGXXXXARKTPPXP 730
           WG P   G +G   S G     G P  Q P   PG  G       + PP P
Sbjct: 199 WGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGP 249


>BC062344-1|AAH62344.1|  256|Homo sapiens PTCHD1 protein protein.
          Length = 256

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 403 HSIYLGLCT*ILKNYFSGFRCFRGLQIFIKFVE 305
           +S +LG+   +L NY+S F CFR L +  +F++
Sbjct: 221 NSTFLGVPFVMLGNYYSSFFCFRLLVVLTRFLK 253


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,370,065
Number of Sequences: 237096
Number of extensions: 1810086
Number of successful extensions: 3895
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3876
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)