Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_D07
         (974 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.85 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   1.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   7.9  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 0.85
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +1

Query: 856 SXXGXGGGGGDEXXXPXXGGGGXXXG 933
           S  G  GGGG     P  GGGG   G
Sbjct: 207 SGGGAPGGGGGSSGGPGPGGGGGGGG 232



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = +1

Query: 871 GGGGGDEXXXPXXGGGGXXXGXXXVXGG 954
           G GGG        GGGG   G     GG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGG 228


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -1

Query: 890 SSPPPPPXPXXDLXXGXXXXPXXXKK 813
           S PPPPP P   L  G    P   +K
Sbjct: 782 SPPPPPPPPPSSLSPGGVPRPTVLQK 807


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = -1

Query: 965 GXXXPPXTXXXPXXXPPPPXXGXXFSSPPPPPXP 864
           G   PP T       P PP  G  +  PP  P P
Sbjct: 196 GNVGPPRTGTPTQ--PQPPRPGGMYPQPPGVPMP 227



 Score = 21.4 bits (43), Expect(2) = 4.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 855 IXXGXGGGGGG 887
           I  G GGGGGG
Sbjct: 526 IPNGGGGGGGG 536



 Score = 21.0 bits (42), Expect(2) = 4.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 864 GXGGGGGG*E 893
           G GGGGGG E
Sbjct: 531 GGGGGGGGRE 540


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 3/20 (15%)
 Frame = -1

Query: 920 PPPPXXGXXFSSPP---PPP 870
           PPPP  G   + PP   PPP
Sbjct: 532 PPPPPGGAVLNIPPQFLPPP 551


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,085
Number of Sequences: 2352
Number of extensions: 6484
Number of successful extensions: 138
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106474641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)