Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_D07
(974 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 34 0.13
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.18
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.18
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.18
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 32 0.54
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.71
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 0.94
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.94
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.94
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.94
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.2
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.2
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.2
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.9
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 2.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.8
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 3.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 3.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.8
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.0
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 6.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.6
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 28 8.8
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 28 8.8
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 28 8.8
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 28 8.8
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 28 8.8
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 34.3 bits (75), Expect = 0.13
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 920 PPPPXXGXXFSSPPPPPXP 864
PPPP G + +PPPPP P
Sbjct: 42 PPPPPCGGGYEAPPPPPPP 60
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 965 GXXXPPXTXXXPXXXPPPPXXGXXFSSPPPPPXP 864
G PP PPPP G PPPPP P
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = -1
Query: 965 GXXXPPXTXXXPXXX--PPPPXXGXXFSSPPPPPXPXXDLXXGXXXXP 828
G PP P PPPP PPPPP P G P
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXX--FSSPPPPPXP 864
PP T P PPPP G PPPPP P
Sbjct: 720 PPITGGPP---PPPPPGGLPPITGGPPPPPPP 748
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 920 PPPPXXGXXFSSPPPPPXP 864
PPPP PPPPP P
Sbjct: 714 PPPPGLPPITGGPPPPPPP 732
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -1
Query: 953 PPXTXXXPXXXPP---PPXXGXXFSSPPPPPXP 864
PP T P PP PP G PPPPP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISG---GPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 965 GXXXPPXTXXXPXXXPPPPXXGXXFSSPPPPPXP 864
G PP PPPP G PPPPP P
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = -1
Query: 965 GXXXPPXTXXXPXXX--PPPPXXGXXFSSPPPPPXPXXDLXXGXXXXP 828
G PP P PPPP PPPPP P G P
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXX--FSSPPPPPXP 864
PP T P PPPP G PPPPP P
Sbjct: 720 PPITGGPP---PPPPPGGLPPITGGPPPPPPP 748
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 920 PPPPXXGXXFSSPPPPPXP 864
PPPP PPPPP P
Sbjct: 714 PPPPGLPPITGGPPPPPPP 732
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -1
Query: 953 PPXTXXXPXXXPP---PPXXGXXFSSPPPPPXP 864
PP T P PP PP G PPPPP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISG---GPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 965 GXXXPPXTXXXPXXXPPPPXXGXXFSSPPPPPXP 864
G PP PPPP G PPPPP P
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = -1
Query: 965 GXXXPPXTXXXPXXX--PPPPXXGXXFSSPPPPPXPXXDLXXGXXXXP 828
G PP P PPPP PPPPP P G P
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXX--FSSPPPPPXP 864
PP T P PPPP G PPPPP P
Sbjct: 303 PPITGGPP---PPPPPGGLPPITGGPPPPPPP 331
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 920 PPPPXXGXXFSSPPPPPXP 864
PPPP PPPPP P
Sbjct: 297 PPPPGLPPITGGPPPPPPP 315
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -1
Query: 953 PPXTXXXPXXXPP---PPXXGXXFSSPPPPPXP 864
PP T P PP PP G PPPPP P
Sbjct: 319 PPITGGPPPPPPPGGLPPISG---GPPPPPPPP 348
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.3 bits (70), Expect = 0.54
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 920 PPPPXXGXXFSSPPPPPXPXXDLXXG 843
PPPP G PPPPP DL G
Sbjct: 539 PPPPPVGMANGGPPPPPPLPLDLLKG 564
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXG---XXFSSPPPPPXP 864
P P PPPP G ++PPPPP P
Sbjct: 494 PSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMP 526
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 32.3 bits (70), Expect = 0.54
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXXFSSPPPPPXP 864
PP T P PP P PPPPP P
Sbjct: 787 PPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 32.3 bits (70), Expect = 0.54
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXXFSSPPPPPXP 864
PP T P PP P PPPPP P
Sbjct: 787 PPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXPXXDLXXGXXXXP 828
P PPPP S PPPP P + G P
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXXFSSPPPPPXPXXDL 852
PP PPPP PPPPP P L
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGL 599
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXPXXDLXXGXXXXPXXXKKXXTK 801
P PPPP +PPPPP P P K +K
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSK 111
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.94
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Frame = -1
Query: 971 KXGXXXPPXTXXXPXXX----PPPPXXGXXFSSPPPPPXPXXDLXXGXXXXP 828
+ G PP T P PPPP G SPPPPP P G P
Sbjct: 268 RTGSPPPPPTGSPPPPPAGGSPPPPRAG----SPPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.94
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Frame = -1
Query: 971 KXGXXXPPXTXXXPXXX----PPPPXXGXXFSSPPPPPXPXXDLXXGXXXXP 828
+ G PP T P PPPP G SPPPPP P G P
Sbjct: 289 RTGSPPPPPTGSPPPPPAGGSPPPPRAG----SPPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.94
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Frame = -1
Query: 971 KXGXXXPPXTXXXPXXX----PPPPXXGXXFSSPPPPPXPXXDLXXGXXXXP 828
+ G PP T P PPPP G SPPPPP P G P
Sbjct: 274 RTGSPPPPPTGSPPPPPAGGSPPPPRAG----SPPPPPPPRGSPPTGSLPPP 321
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXXFSSPPP--PPXP 864
PP P PPPP F PPP PP P
Sbjct: 35 PPMCAPPPLPCPPPPICPPQFCPPPPMCPPPP 66
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXXFSSPPPPPXP 864
P P PPPP PPPPP P
Sbjct: 53 PQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXXFSSPPPPP 870
PP P PPPP PPPPP
Sbjct: 52 PPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXXFSSPPPPPXP 864
PP P PPPP PPPPP P
Sbjct: 46 PPPPICPPQFCPPPP-----MCPPPPPPPP 70
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 944 TXXXPXXXPPPPXXGXXFSSPPPPPXP 864
T P PPPP S P PPP P
Sbjct: 151 TSSAPPPPPPPPPVSVPSSKPTPPPPP 177
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 944 TXXXPXXXPPPPXXGXXFSSPPPPPXP 864
T P PPPP S P PPP P
Sbjct: 151 TSSAPPPPPPPPPVSVPSSKPTPPPPP 177
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 920 PPPPXXGXXFSSPPPPPXP 864
PPPP G PPPPP P
Sbjct: 42 PPPPMCGCAPPPPPPPPPP 60
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXP 864
P PPPP PPPPP P
Sbjct: 37 PACAPPPPPMCGCAPPPPPPPPP 59
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 6/40 (15%)
Frame = -1
Query: 965 GXXXPPXTXXXPXXXPPPPXXG------XXFSSPPPPPXP 864
G PP PPPP G F +PPPPP P
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 920 PPPPXXGXXFSSPPPPP 870
PPPP G F +PPP P
Sbjct: 324 PPPPSAGYFFQAPPPAP 340
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = -1
Query: 953 PPXTXXXPXXXP-PPPXXGXXFSSPPPPPXP 864
PP P P PPP PPPPP P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = -1
Query: 950 PXTXXXPXXXPPPPXXG---XXFSSPPPPPXP 864
P + P PPPP G +PPPPP P
Sbjct: 624 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = -1
Query: 950 PXTXXXPXXXPPPPXXG---XXFSSPPPPPXP 864
P + P PPPP G +PPPPP P
Sbjct: 450 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXP 864
P PPP SSPPPPP P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPP 144
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 917 PPPXXGXXFSSPPPPPXPXXDLXXGXXXXP 828
P P G +SPPPPP P G P
Sbjct: 111 PAPQHGDHEASPPPPPPPRKSRAGGSSPPP 140
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = -1
Query: 953 PPXTXXXPXXXP-PPPXXGXXFSSPPPPPXP 864
PP P P PPP PPPPP P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXPXXDL 852
P PPP G PPPPP DL
Sbjct: 660 PMPVPPPGGLGGFMPPPPPPPPMPGDL 686
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXPXXDL 852
P PPP G PPPPP DL
Sbjct: 660 PMPVPPPGGLGGFMPPPPPPPPMPGDL 686
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXP 864
P PPPP PPPPP P
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPP 1362
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXP 864
P PPPP PPPPP P
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPPPP 1363
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXP 864
P PPPP + PPPP P
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPP 1361
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 871 GGGGGDEXXXPXXGGGGXXXGXXXVXGG 954
GGGGGD GGGG G GG
Sbjct: 216 GGGGGDRYGGDRYGGGGGRRGSPDRRGG 243
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 920 PPPPXXGXXFSSPPPPPXP 864
PPPP +PPPPP P
Sbjct: 235 PPPPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 920 PPPPXXGXXFSSPPPPPXP 864
PPPP +PPPPP P
Sbjct: 221 PPPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 920 PPPPXXGXXFSSPPPPPXP 864
PPPP +PPPPP P
Sbjct: 221 PPPPLPPVGAGAPPPPPPP 239
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 920 PPPPXXGXXFSSPPPPPXP 864
PPPP PPPPP P
Sbjct: 111 PPPPAPAAPCCPPPPPPTP 129
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXXFSSPPPPPXP 864
P P PP P S PPPPP P
Sbjct: 482 PAEVSKSPPPPPPLPPIATPSSVPPPPPPP 511
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXXFSSPPPPPXP 864
PP P P P S PPPPP P
Sbjct: 467 PPPPSRIPNPSPSPQPAEVSKSPPPPPPLP 496
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXXFSSPPPPPXP 864
P P PP P S PPPPP P
Sbjct: 489 PAEVSKSPPPPPPLPPIATPSSVPPPPPPP 518
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 953 PPXTXXXPXXXPPPPXXGXXFSSPPPPPXP 864
PP P P P S PPPPP P
Sbjct: 474 PPPPSRIPNPSPSPQPAEVSKSPPPPPPLP 503
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXP 864
P PPPP S PPPP P
Sbjct: 11 PLDLPPPPASVVLHPSAPPPPPP 33
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXP 864
P PPPP S PPPP P
Sbjct: 11 PLDLPPPPASVVLHPSAPPPPPP 33
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXP 864
P PPPP S PPPP P
Sbjct: 11 PLDLPPPPASVVLHPSAPPPPPP 33
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXP 864
P PPPP S PPPP P
Sbjct: 11 PLDLPPPPASVVLHPSAPPPPPP 33
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXP 864
P PPP SS PPPP P
Sbjct: 1761 PQYQQPPPMQSYGISSGPPPPPP 1783
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 932 PXXXPPPPXXGXXFSSPPPPPXP 864
P PPP SS PPPP P
Sbjct: 386 PQYQQPPPMQSYGISSGPPPPPP 408
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,749,123
Number of Sequences: 27780
Number of extensions: 175471
Number of successful extensions: 2787
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1816
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2531861596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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