Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_D02
         (870 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.56 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   4.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.2  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.56
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = +1

Query: 754 PXTXPPPKXPXTPXQG--PRXLAXFPIGXP 837
           P   PPP  P  P  G  P  LA  P+G P
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAGGPLGGP 606


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 16/45 (35%), Positives = 16/45 (35%)
 Frame = -2

Query: 842 GGGXPMGKXASXRGPWXGVXGXLGGGXVXGXVRGXSPXCGG*PXY 708
           GG    G     RG   G  G  GGG   G   G     GG P Y
Sbjct: 67  GGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDRNGDGGRPAY 111


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 11/29 (37%), Positives = 11/29 (37%)
 Frame = +1

Query: 721 PPQXGDXPRTXPXTXPPPKXPXTPXQGPR 807
           PP      R      PPP  P  P  GPR
Sbjct: 248 PPSAQGMQRPPMMGQPPPIRPPNPMGGPR 276


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,847
Number of Sequences: 2352
Number of extensions: 11526
Number of successful extensions: 237
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)