Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_C24
         (927 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    22   2.7  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.3  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         25   4.3  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.2 bits (45), Expect(2) = 2.7
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 926 GGXGGGGAG 900
           GG GGGGAG
Sbjct: 172 GGGGGGGAG 180



 Score = 21.0 bits (42), Expect(2) = 2.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 923 GXGGGGAGG 897
           G GGGG+GG
Sbjct: 201 GAGGGGSGG 209


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 16/49 (32%), Positives = 18/49 (36%)
 Frame = +2

Query: 524 FLIP*XPLTXXPXVXPCPXXLDXASXXPRQPXXNXPXPSRXPPPPSXXP 670
           FL P   L   P     P  L   +  P  P    P P+  PPPP   P
Sbjct: 547 FLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPP-PAPPPPPPMGPP 594



 Score = 25.0 bits (52), Expect = 3.3
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 898 PPAPPPPXP 924
           PPAPPPP P
Sbjct: 582 PPAPPPPPP 590


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -2

Query: 926 GGXGGGGAGG 897
           GG GGGGAGG
Sbjct: 249 GGGGGGGAGG 258


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 458,772
Number of Sequences: 2352
Number of extensions: 5389
Number of successful extensions: 132
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)