Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_C22
(1414 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 39 0.010
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 37 0.040
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 35 0.12
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.21
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.21
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.37
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.37
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.49
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 32 1.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 32 1.1
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.5
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 31 1.5
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 2.0
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 2.6
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 30 3.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.4
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 30 3.4
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 30 3.4
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 4.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 4.6
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 30 4.6
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.0
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 8.0
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 25 8.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 24 9.2
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 38.7 bits (86), Expect = 0.010
Identities = 26/114 (22%), Positives = 34/114 (29%)
Frame = -1
Query: 787 PCXXXXAXHSXPPXAPGXAXPRRXPXSLXAGRRXPXXSAPXPRXXPXRVXRXXSLAXVFR 608
P H P PG P + + A + ++P P P + S
Sbjct: 83 PAHPHHLQHPHPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPP 142
Query: 607 PXPLPFXAXSRXXXPSXPPTPPXXPXLSPPXXPLXXXEXXXXKTXPQXXXTPXP 446
P +P R P PP P P PP P +T P P P
Sbjct: 143 PPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -3
Query: 239 PPXVAPXFXPXXFXPXFXPPXXPLXVXXPXPXXLPPXXPPXP 114
PP P P P PP P + P P PP PP P
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRP-PMTPPSPQRRPPRTPPSP 178
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 36.7 bits (81), Expect = 0.040
Identities = 23/67 (34%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Frame = +1
Query: 967 GWGXGXGGGXGX--GXXAAGGKXGXXVAXXXXXXXXXXXXARWEXRERKG*XGGGXXGAG 1140
GWG G GGG G G GG G R +G GGG G G
Sbjct: 63 GWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRG 122
Query: 1141 XGGGAXG 1161
GGG G
Sbjct: 123 GGGGGRG 129
Score = 35.9 bits (79), Expect = 0.069
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXGXXVAXXXXXXXXXXXXARWEXRERKG*XGGGXXGAGXG 1146
GWG GG G G GG G W G GGG G G G
Sbjct: 42 GWGRPGWGGGGPGWGRGGGGSGWG-GGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGG 100
Query: 1147 GGAXG 1161
GG G
Sbjct: 101 GGGRG 105
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 35.1 bits (77), Expect = 0.12
Identities = 31/118 (26%), Positives = 34/118 (28%), Gaps = 3/118 (2%)
Frame = +1
Query: 115 GKGGXXGGSXXGXGXXTXSGXXGGXNXGXNXXG---XXWGATXGGXXSXXXXXXXXXXXN 285
G+GG GGS G G + G G G G WG GG S
Sbjct: 55 GRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGG-SSAGGWGGSQGGSQ 113
Query: 286 RXXRRGXGGLXVSXAXXXXGSXRQGXXXRXXKXXWXRGXGXGG*GGPRTXXGXXGXGW 459
G GG S + G W G GG R G G GW
Sbjct: 114 GGSSGGWGGSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQG-GW 170
Score = 34.7 bits (76), Expect = 0.16
Identities = 33/123 (26%), Positives = 39/123 (31%), Gaps = 4/123 (3%)
Frame = +1
Query: 115 GKGGXXGG--SXXGXGXXTXSGXXGGXNXGXNXXGXXWGATXGGXXSXXXXXXXXXXXNR 288
G GG GG G G G GG G + G WG GG N+
Sbjct: 147 GWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGG--WGGQNGGGQGGNQGGGGGRGGNQ 204
Query: 289 XXRRGXGGLXVSXAXXXXGSXRQGXXXRXXKXXWXRG--XGXGG*GGPRTXXGXXGXGWX 462
+G G G + G + + RG G GG GG G G GW
Sbjct: 205 GGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGPGGWGG-----GGRGGGWG 259
Query: 463 XXG 471
G
Sbjct: 260 GWG 262
Score = 31.5 bits (68), Expect = 1.5
Identities = 31/143 (21%), Positives = 37/143 (25%)
Frame = +1
Query: 43 GGAPPXXLXGFKRGXXXX*XWDXXGKGGXXGGSXXGXGXXTXSGXXGGXNXGXNXXGXXW 222
GG+ G G D G GGS G + G G W
Sbjct: 76 GGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGGSQGGSQGGSSGGWGGSSRSDSGSGQGGW 135
Query: 223 GATXGGXXSXXXXXXXXXXXNRXXRRGXGGLXVSXAXXXXGSXRQGXXXRXXKXXWXRGX 402
G GG + N RG G G + G + +G
Sbjct: 136 GGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGW---GGQNGGGQGG 192
Query: 403 GXGG*GGPRTXXGXXGXGWXXXG 471
GG GG G GW G
Sbjct: 193 NQGGGGGRGGNQGGEQGGWGGQG 215
Score = 29.1 bits (62), Expect = 8.0
Identities = 34/133 (25%), Positives = 37/133 (27%), Gaps = 1/133 (0%)
Frame = +2
Query: 71 ASRGGXPXXRXGXXXXRGXXRG-GAXXGXGXKRXVGAXGGEIXVXXXXGXXGVQXXGXXX 247
AS GG R G G RG G+ G G GA G G G G
Sbjct: 47 ASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSAGGWG 106
Query: 248 XEXXXXXXXXXXXXXGGXGXGGXXSXRLXXXAGAGAREX*XGXXSXXGXGGXGAAXEXGR 427
GG G S R +G G G S G G + G
Sbjct: 107 GS--------QGGSQGGSSGGWGGSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQGGQNGG 158
Query: 428 ERXXXXXGXGGXG 466
G GG G
Sbjct: 159 GGRGGSGGQGGWG 171
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.21
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = -2
Query: 465 PXPPXPXXXXXRSRPXSXAAPXPPXPXXLXXPXXXSLAPAPAXXXSRXDXXPPXPXP 295
P PP P P P PP P P + P P PP P P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 186 PPXAPTXRXXPXPXXAPPLXSPLXXXIPXLXXGXPPLEAXXXGGGGPP 43
PP P+ P P PP +P +P + PP G GG P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 334
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.21
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = -2
Query: 465 PXPPXPXXXXXRSRPXSXAAPXPPXPXXLXXPXXXSLAPAPAXXXSRXDXXPPXPXP 295
P PP P P P PP P P + P P PP P P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 186 PPXAPTXRXXPXPXXAPPLXSPLXXXIPXLXXGXPPLEAXXXGGGGPP 43
PP P+ P P PP +P +P + PP G GG P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 344
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.37
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXGXXVAXXXXXXXXXXXXARWEXRERKG*XGGGXXGAGXG 1146
G G G GGG G G GG G G GGG G G G
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Query: 1147 GGAXG 1161
GG G
Sbjct: 83 GGCGG 87
Score = 32.7 bits (71), Expect = 0.65
Identities = 37/145 (25%), Positives = 38/145 (26%)
Frame = +2
Query: 44 GGPPPPXXXASRGGXPXXRXGXXXXRGXXRGGAXXGXGXKRXVGAXGGEIXVXXXXGXXG 223
GG PP + GG G G GG G G G GG G G
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGGC---GGGGGGCGGGGGCGGGGGGCGG-----GGGGCGG 101
Query: 224 VQXXGXXXXEXXXXXXXXXXXXXGGXGXGGXXSXRLXXXAGAGAREX*XGXXSXXGXGGX 403
G GG G GG G G G G GG
Sbjct: 102 GGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGG 161
Query: 404 GAAXEXGRERXXXXXGXGGXGLGXC 478
G G G GG G G C
Sbjct: 162 GCGGGGGGCGGGGGGGCGGGGGGGC 186
Score = 29.9 bits (64), Expect = 4.6
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXGXXVAXXXXXXXXXXXXARWEXRERKG*XGGGXXGAGXG 1146
G G G GGG G G GG G G GGG G G G
Sbjct: 76 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCG-GGGGGCGGGCG 134
Query: 1147 GGAXG 1161
GG G
Sbjct: 135 GGGGG 139
Score = 29.5 bits (63), Expect = 6.0
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXGXXVAXXXXXXXXXXXXARWEXRERKG*XGGGXXGAGXG 1146
G G G GGG G G GG G G GGG G G G
Sbjct: 130 GGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGC------GGGGGGGCGGGGG 183
Query: 1147 GGAXG 1161
GG G
Sbjct: 184 GGCGG 188
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.5 bits (73), Expect = 0.37
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = -2
Query: 480 KQXPXPXPPXPXXXXXRSRPXSXAAPXPPXPXXLXXPXXXSLAPAPAXXXSRXDXXPPXP 301
K P P PP P + R S P P P P +A A + PP P
Sbjct: 506 KSPPTPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPP 565
Query: 300 XP 295
P
Sbjct: 566 PP 567
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/84 (27%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Frame = -1
Query: 754 PPXAPGXAXPRRXPXSLXAGRRXPXX--SAPXPRXXPXRVXRXXSLAXVFRPXPLPFXAX 581
PP APG +R S R P S P P + + + P P P
Sbjct: 512 PPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQN 571
Query: 580 SRXXXPSXPPTPPXXPXLSPPXXP 509
P PP PP PP P
Sbjct: 572 LSGAPPPPPPPPPMLGGPPPPPPP 595
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.1 bits (72), Expect = 0.49
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXGXXVAXXXXXXXXXXXXARWEXRERKG*XGGGXXGAGXG 1146
G G GG G GG+ G W G GGG G G G
Sbjct: 117 GGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGG 176
Query: 1147 GGA 1155
GGA
Sbjct: 177 GGA 179
Score = 32.7 bits (71), Expect = 0.65
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXGXXVAXXXXXXXXXXXXARWEXRERKG*XGGGXXGAGXG 1146
GWG GGG G G GG G W GG G G G
Sbjct: 48 GWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDW----------GGNGGGGRG 97
Query: 1147 GGAXGE 1164
GG G+
Sbjct: 98 GGGRGD 103
Score = 29.5 bits (63), Expect = 6.0
Identities = 31/117 (26%), Positives = 32/117 (27%), Gaps = 1/117 (0%)
Frame = +1
Query: 103 WDXXGKG-GXXGGSXXGXGXXTXSGXXGGXNXGXNXXGXXWGATXGGXXSXXXXXXXXXX 279
W G G G GG+ G G GG N G G WG GG
Sbjct: 78 WGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGG---GGNWGG--GGNNDGGWGGNNGGG 132
Query: 280 XNRXXRRGXGGLXVSXAXXXXGSXRQGXXXRXXKXXWXRGXGXGG*GGPRTXXGXXG 450
G GG G G RG G GG G R G G
Sbjct: 133 GGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGGGAGERIAEGVLG 189
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 471 PXPXPPXPXXXXXRSRPXSXAAPXPPXPXXLXXPXXXSLAPAP 343
P P PP P + S A P PP P + P + AP P
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPP 651
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 471 PXPXPPXPXXXXXRSRPXSXAAPXPPXPXXLXXPXXXSLAPAP 343
P P PP P + S A P PP P + P + AP P
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPP 477
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical protein
C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 8.0
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXG 1032
G G G GGG G G A+GG G
Sbjct: 121 GGGCGGGGGGGGGGYASGGSGG 142
Score = 25.8 bits (54), Expect(2) = 1.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXG 1032
G G G GGG G G GG G
Sbjct: 97 GGGGGCGGGGGCGGGGGGGCGG 118
Score = 25.0 bits (52), Expect(2) = 1.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGG 1023
G G G GGG G G GG
Sbjct: 103 GGGGGCGGGGGGGCGGGGG 121
Score = 24.6 bits (51), Expect(2) = 9.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 1108 G*XGGGXXGAGXGGGAXG 1161
G GGG G G GGG G
Sbjct: 101 GCGGGGGCGGGGGGGCGG 118
Score = 24.6 bits (51), Expect(2) = 9.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 1108 G*XGGGXXGAGXGGGAXG 1161
G GGG G G GGG G
Sbjct: 109 GGGGGGGCGGGGGGGCGG 126
Score = 24.6 bits (51), Expect(2) = 1.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 1108 G*XGGGXXGAGXGGGAXG 1161
G GGG G G GGG G
Sbjct: 115 GCGGGGGGGCGGGGGGGG 132
Score = 24.6 bits (51), Expect(2) = 1.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 1108 G*XGGGXXGAGXGGGAXG 1161
G GGG G G GGG G
Sbjct: 117 GGGGGGGCGGGGGGGGGG 134
Score = 22.6 bits (46), Expect(2) = 9.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXG 1032
G G GGG G G GG G
Sbjct: 86 GGGGCGGGGCGGGGGGCGGGGG 107
Score = 22.6 bits (46), Expect(2) = 9.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXG 1032
G G G GGG G GG G
Sbjct: 92 GGGCGGGGGGCGGGGGCGGGGG 113
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.5 bits (68), Expect = 1.5
Identities = 24/98 (24%), Positives = 27/98 (27%)
Frame = -2
Query: 423 PXSXAAPXPPXPXXLXXPXXXSLAPAPAXXXSRXDXXPPXPXPPXXXXXXXXXXXXPSXX 244
P + AP PP P P + AP P S P P PP +
Sbjct: 464 PINANAPPPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPP----PLLGIAPMSTNA 519
Query: 243 XXPXXCTPXXPXXIXTXISPPXAPTXRXXPXPXXAPPL 130
P P PP P P PPL
Sbjct: 520 PPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPL 557
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -3
Query: 239 PPXVAPXFXPXXFXPXFXPPXXPLXVXXPXPXXLPPXXPPXPXXSXXXXKXSPLLKPXRX 60
PP P P P PP P P P PP PP P P P +
Sbjct: 31 PPPPPPMCAPPPL-PCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQS 89
Query: 59 XGGAP 45
AP
Sbjct: 90 YAPAP 94
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.5 bits (68), Expect = 1.5
Identities = 22/64 (34%), Positives = 23/64 (35%)
Frame = +1
Query: 961 RXGWGXGXGGGXGXGXXAAGGKXGXXVAXXXXXXXXXXXXARWEXRERKG*XGGGXXGAG 1140
R G G G GGG G G + GG G R G GGG G G
Sbjct: 212 RGGSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGG---GRGYGGGGGGGGYGYG 268
Query: 1141 XGGG 1152
GGG
Sbjct: 269 GGGG 272
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 955 RXRXGWGXGXGGGXGXGXXAAGGKXG 1032
R R GWG G GGG G G GG G
Sbjct: 242 RDRGGWG-GGGGGRGYGGGGGGGGYG 266
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 2.0
Identities = 34/155 (21%), Positives = 39/155 (25%), Gaps = 1/155 (0%)
Frame = -2
Query: 762 TPXPRXPXXXXPPAAXPXPCXQXGGRPXXXXPXPDXXLXASXAPXXWPXFSARXPYPSXX 583
TP P P PP P P + +P P P AP A P P+
Sbjct: 23 TPQPPPP----PPPPKPAPYVEQSAQPQQTAPPPPP------APYPQQAVPAPAPPPAPY 72
Query: 582 XRAXXRXXXXXXXXXXXXXXXPXXPLXVXXXXXXKQXPXPXP-PXPXXXXXRSRPXSXAA 406
+ P P P P P P P
Sbjct: 73 PQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQP 132
Query: 405 PXPPXPXXLXXPXXXSLAPAPAXXXSRXDXXPPXP 301
P PP P P P PA + D P P
Sbjct: 133 PPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRP 167
Score = 31.1 bits (67), Expect = 2.0
Identities = 32/129 (24%), Positives = 36/129 (27%), Gaps = 12/129 (9%)
Frame = -2
Query: 471 PXPXPPXPXXXXXRS-RPXSXAAPXP-----------PXPXXLXXPXXXSLAPAPAXXXS 328
P P PP P +S +P A P P P P P APAP
Sbjct: 28 PPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASY 87
Query: 327 RXDXXPPXPXPPXXXXXXXXXXXXPSXXXXPXXCTPXXPXXIXTXISPPXAPTXRXXPXP 148
+ P PP P P P P PP P P P
Sbjct: 88 PQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVP-APAPYQQQPPPPPPPPHYPPPPP 146
Query: 147 XXAPPLXSP 121
PP +P
Sbjct: 147 HYPPPPPAP 155
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.7 bits (66), Expect = 2.6
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXGXXVAXXXXXXXXXXXXARWEXRERKG*XGGGXXGAGXG 1146
G+G G GG G G GG G + G GGG G G G
Sbjct: 118 GYGGGGDGGGGYGGYGGGGYGGMG-GGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYG 176
Query: 1147 GGAXG 1161
GG G
Sbjct: 177 GGGDG 181
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXGXXVAXXXXXXXXXXXXARWEXRERKG*XGGGXXGAGXG 1146
G+G G GGG G GG G G GGG G G G
Sbjct: 151 GYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFG----GGGMGGYGGGMGGGGYG 206
Query: 1147 GGAXG 1161
GG G
Sbjct: 207 GGGMG 211
Score = 29.5 bits (63), Expect = 6.0
Identities = 30/121 (24%), Positives = 32/121 (26%), Gaps = 2/121 (1%)
Frame = +1
Query: 115 GKGGXXGGSXXGXGXXTXSGXXGGXNXGXNXXGXXWGATXGGXXSXXXXXXXXXXXNRXX 294
G+GG GG G G G GG G G +G GG
Sbjct: 95 GQGGYGGGGDFGGGMG-GGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYG 153
Query: 295 RRGXGG--LXVSXAXXXXGSXRQGXXXRXXKXXWXRGXGXGG*GGPRTXXGXXGXGWXXX 468
G GG G G G G GG GG G G G
Sbjct: 154 GGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGG 213
Query: 469 G 471
G
Sbjct: 214 G 214
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical protein
W01G7.1 protein.
Length = 627
Score = 30.3 bits (65), Expect = 3.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 1022 PPAAXLPXPXPPPXPXPHP 966
PP LP P PPP P P P
Sbjct: 512 PPLPPLPPPPPPPKPKPAP 530
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXGXXVAXXXXXXXXXXXXARWEXRERKG*XGGGXXGAGXG 1146
G G G GG G G GG G G GGG G G G
Sbjct: 109 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGG 168
Query: 1147 GGAXG 1161
GG G
Sbjct: 169 GGCGG 173
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXGXXVAXXXXXXXXXXXXARWEXRERKG*XGGGXXGAGXG 1146
G G G GG G G GG G G GGG G G G
Sbjct: 109 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGG 168
Query: 1147 GGAXG 1161
GG G
Sbjct: 169 GGCGG 173
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 30.3 bits (65), Expect = 3.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 1022 PPAAXLPXPXPPPXPXPHP 966
PP LP P PPP P P P
Sbjct: 512 PPLPPLPPPPPPPKPKPAP 530
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -3
Query: 239 PPXVAPXFXPXXFXPXFXPPXXPLXVXXPXPXXLPPXXPP 120
PP P P F P PP P+ V P P P PP
Sbjct: 88 PPCFGPACPPPCFGPACAPP-APIIVNGPPPCFGPACPPP 126
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = -2
Query: 471 PXPXPPXPXXXXXRSRPXSXAAPXPPXPXXLXXPXXXSLAPAPAXXXSRXDXXP 310
P PP P S P + P PP P P +P P S P
Sbjct: 69 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIP 122
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = -2
Query: 471 PXPXPPXPXXXXXRSRPXSXAAPXPPXPXXLXXPXXXSLAPAPAXXXSRXDXXP 310
P PP P S P + P PP P P +P P S P
Sbjct: 291 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIP 344
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -2
Query: 411 AAPXPPXPXXLXXPXXXSLAPAPAXXXSRXDXXPPXPXPP 292
A P PP P + P APA PP P PP
Sbjct: 313 AVPPPPIPPPIQPPPYSYYPVAPAAAPQVYHYAPPPPPPP 352
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical protein
K02E2.2 protein.
Length = 1021
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 1022 PPAAXLPXPXPPPXPXPHP 966
PP LP P PPP P P P
Sbjct: 778 PPFFALPVPPPPPVPPPPP 796
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical protein
F58E10.3a protein.
Length = 561
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXG 1032
G+G G GGG G G GG+ G
Sbjct: 43 GYGGGGGGGYGGGGYGGGGRGG 64
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 29.5 bits (63), Expect = 6.0
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Frame = +3
Query: 522 GERXGXXGGVGGXXGXXXRXXAXKGRGXGR-KTWAXEXXRXTRXGXXRGXGAXXXGXRRP 698
G R GG G GRG GR + E R T G G G G R
Sbjct: 132 GSRDAEEGGAPRGGGRGGSRRGGGGRGGGRTNSGGEETARDTDGGERGGRGGGRRGGRGR 191
Query: 699 AXKXXGXRRG 728
+ G R G
Sbjct: 192 GGRGRGGRGG 201
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Frame = -2
Query: 471 PXPXPPXPXXXXXRSRPXSXAAPXPPXPXXLXXPXXXSL-APAPAXXXSRXDXXPPXPXP 295
P P PP P P PP P P L P P S PP P P
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.1 bits (62), Expect = 8.0
Identities = 21/67 (31%), Positives = 23/67 (34%)
Frame = +1
Query: 952 RRXRXGWGXGXGGGXGXGXXAAGGKXGXXVAXXXXXXXXXXXXARWEXRERKG*XGGGXX 1131
+R +G G G G G G A GG G V G GGG
Sbjct: 68 KRGYAQYGGGGGYGGGHGGAAVGGGYGGAVGGGGGGGYGGGHGGG-----HGGAVGGGYG 122
Query: 1132 GAGXGGG 1152
G G GGG
Sbjct: 123 GGGGGGG 129
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein 4
protein.
Length = 751
Score = 24.6 bits (51), Expect(2) = 8.5
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 967 GWGXGXGGGXGXGXXAAGGKXG 1032
GWG GGG G G + G
Sbjct: 692 GWGGNGGGGWGNNDPWGGSRWG 713
Score = 22.6 bits (46), Expect(2) = 8.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 1102 RKG*XGGGXXGAGXGGGAXGE 1164
R G GG G G GGG G+
Sbjct: 711 RWGGGRGGWGGGGWGGGGWGK 731
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical protein
F02D10.1 protein.
Length = 316
Score = 23.8 bits (49), Expect(2) = 9.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 1108 G*XGGGXXGAGXGGGAXG 1161
G GGG AG GGG G
Sbjct: 98 GGGGGGGEAAGGGGGCTG 115
Score = 23.4 bits (48), Expect(2) = 9.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 973 GXGXGGGXGXGXXAAGG 1023
G G GGG G G GG
Sbjct: 86 GAGGGGGYGAGGGGGGG 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,581,363
Number of Sequences: 27780
Number of extensions: 260698
Number of successful extensions: 3990
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3021
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4016977708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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