Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_C21
(858 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0299 - 17051570-17052474,17053542-17053755 32 0.67
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.67
07_03_0177 - 14770777-14772045 31 1.6
03_01_0515 - 3864796-3865425 29 4.7
08_02_0186 + 13965960-13966424 29 6.3
08_01_1081 + 11058119-11059756 29 6.3
07_03_0204 - 15150854-15151147,15152230-15153689,15154055-151542... 28 8.3
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166 28 8.3
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 28 8.3
02_05_0686 - 30900748-30902167,30903442-30904742 28 8.3
01_06_1402 + 37052996-37053449,37053533-37053630,37053718-370538... 28 8.3
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/62 (32%), Positives = 22/62 (35%)
Frame = +1
Query: 658 FPXXPPXLXPXTXXPGX*KXXXPPLFKTIXRXPPXGGPPXPXXXXFXXFFXXPXXPPXXP 837
FP PP P + P PP F P PP P F+ P PP P
Sbjct: 277 FPHLPPIFSPPSPPP-----PPPPAFP----FPFPQLPPLPHFPPLPSFYPSPPPPPPPP 327
Query: 838 PP 843
PP
Sbjct: 328 PP 329
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 755 PPRGAXPPPXXSSXXXFFXXPXXPPXPPP 841
PP PPP S F P PP PPP
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPPPP 572
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 755 PPRGAXPPPXXSSXXXFFXXPXXPPXPPP 841
PP PPP + F P PP PPP
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPPPP 573
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 739 TIXRXPPXGGPPXPXXXXFXXFFXXPXXPPXXPPP 843
T PP PP P F P PP PPP
Sbjct: 540 TAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPP 574
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +1
Query: 661 PXXPPXLXPXTXXPGX*KXXXPPLFKTIXRXPPXGGPPXPXXXXFXXFFXXPXXPPXXPP 840
P PP P P PP PP PP P P PP PP
Sbjct: 587 PPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPP----LPNHSVLPPPPPPPPP 642
Query: 841 P 843
P
Sbjct: 643 P 643
>07_03_0177 - 14770777-14772045
Length = 422
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/60 (36%), Positives = 23/60 (38%)
Frame = -1
Query: 840 GGGXGGXXGXXKKXXKXXXXGGGXAPRGGXPXNCFKKGGGXXFLXXXXXXXGXXXGGXXG 661
GGG GG G K GGG +GG F KGGG L G GG G
Sbjct: 230 GGGLGGGGGLGGGIGKGGGLGGGIG-KGGGLGGGFGKGGG---LGGGGGLGGGEDGGLGG 285
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -1
Query: 840 GGGXGGXXGXXKKXXKXXXXGGGXAPRGGXPXNCFKKGGGXXFLXXXXXXXGXXXGGXXG 661
GGG G G K GGG +GG F KGGG G GG G
Sbjct: 322 GGGIGKGGGLGGSFGKGGGLGGGFG-KGGGIGGGFGKGGGLGGGGGLGGGGGGGGGGFGG 380
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 755 PPRGAXPPPXXSSXXXFFXXPXXPPXPPPXNXT 853
PP A PP SS P PP PPP + T
Sbjct: 48 PPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVT 80
>08_02_0186 + 13965960-13966424
Length = 154
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 449 PPXPXXPGFXXXETPPGPFPRAPILKXGGGG 541
PP P P TPP P P A + GGGG
Sbjct: 70 PPPPSQPAGPSSHTPPCP-PAAVVCCGGGGG 99
>08_01_1081 + 11058119-11059756
Length = 545
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 211 GTSGGRPERSLSPATTRTCSGAI 279
G SG RP PAT+ +CSGA+
Sbjct: 75 GGSGDRPPPKKRPATSGSCSGAV 97
>07_03_0204 -
15150854-15151147,15152230-15153689,15154055-15154266,
15155123-15155275,15155569-15155630,15155733-15155785,
15156380-15156452,15156499-15156619,15156699-15156878,
15157333-15157391
Length = 888
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 755 PPRGAXPPPXXSSXXXFFXXPXXPPXPP 838
PP PPP ++ P PP PP
Sbjct: 319 PPWAMHPPPYHMQGMPYYPGPYYPPYPP 346
>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
Length = 545
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 213 SVRVHCEAAGLSPRTCRHVST 151
S+R+HC A L+PR CR T
Sbjct: 401 SLRLHCPAPLLAPRKCRETCT 421
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +1
Query: 661 PXXPPXLXPXTXXPGX*KXXXPPLFKTIXRXPPXGGPPXPXXXXFXXFFXXPXXPPXXPP 840
P PP P PG PP PP G PP F P PP PP
Sbjct: 385 PPPPPDTRPPFMAPGVNARPLPP--------PPPGLPPAQMQ--MAPFGVPPGPPPMLPP 434
Query: 841 P 843
P
Sbjct: 435 P 435
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 661 PXXPPXLXPXTXXPGX*KXXXPPLFKTIXRXPPXGGPPXPXXXXFXXFFXXPXXPPXXPP 840
P PP P P PP K PP GPP P P P PP
Sbjct: 311 PAPPP---PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367
Query: 841 P 843
P
Sbjct: 368 P 368
>01_06_1402 +
37052996-37053449,37053533-37053630,37053718-37053888,
37054017-37054117,37054928-37055063,37055155-37055205,
37055311-37055598,37055896-37056130,37056408-37056523,
37057300-37057496,37057739-37057745
Length = 617
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 758 PRGAXPPPXXSSXXXFFXXPXXPPXPPP 841
P A PPP ++ P PP PPP
Sbjct: 77 PNSALPPPPAAAAANAEAKPQPPPPPPP 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,825,247
Number of Sequences: 37544
Number of extensions: 414918
Number of successful extensions: 1892
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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