Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_C19
(1045 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.009
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.009
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.27
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.36
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 0.52
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.9
SPCPB16A4.05c |||urease accessory protein UREG |Schizosaccharomy... 28 2.5
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 3.3
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 4.4
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.9 bits (79), Expect = 0.009
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = +2
Query: 773 PPPPXPXPXXXXXXXXXNTTXXXXXXPPPPPXPPXXXXXPXPXXXXPXXXXXXPXXXPPP 952
PPPP P +++ P PPP P P P PP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 953 PPPXXPP 973
PP PP
Sbjct: 423 LPPSAPP 429
Score = 33.9 bits (74), Expect = 0.038
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +2
Query: 761 KKXXPPPPXPXPXXXXXXXXXNTTXXXXXXPPPPPXPPXXXXXPXPXXXXPXXXXXXPXX 940
KK PPPP P N + PPPPP P
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP--------PRSNAAGSIPLPPQGRS 359
Query: 941 XPPPPPPXXPP 973
PPPPPP P
Sbjct: 360 APPPPPPRSAP 370
Score = 31.1 bits (67), Expect = 0.27
Identities = 20/81 (24%), Positives = 21/81 (25%), Gaps = 1/81 (1%)
Frame = +2
Query: 773 PPPPXPXPXXXXXXXXXNTTXXXXXXPPPPPXPPXXXXXPXPXXXXPXXXXXXPXXXP-P 949
PPP P N + P PP P P P P P P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 950 PPPPXXPPXXXXXXXXPXXXP 1012
P P PP P P
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPP 471
Score = 29.9 bits (64), Expect = 0.62
Identities = 17/67 (25%), Positives = 17/67 (25%)
Frame = +2
Query: 773 PPPPXPXPXXXXXXXXXNTTXXXXXXPPPPPXPPXXXXXPXPXXXXPXXXXXXPXXXPPP 952
P PP P P PP PP P P P PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 953 PPPXXPP 973
P P P
Sbjct: 478 PAPAPAP 484
Score = 29.9 bits (64), Expect = 0.62
Identities = 18/67 (26%), Positives = 18/67 (26%)
Frame = +3
Query: 771 PPPPPXPXXXXXXXXXXXTPXXXXXPXPPPPPXPXXPXXPPXXXXXXXXXXXXXPPXXPP 950
P PP P P PP P P PP PP P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP--LPAGMPAAPPLPPAAPA 475
Query: 951 PPPPXXP 971
PPP P
Sbjct: 476 PPPAPAP 482
Score = 29.5 bits (63), Expect = 0.82
Identities = 18/65 (27%), Positives = 18/65 (27%)
Frame = +2
Query: 776 PPPXPXPXXXXXXXXXNTTXXXXXXPPPPPXPPXXXXXPXPXXXXPXXXXXXPXXXPPPP 955
PPP P P PPPPP P P PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSA-----PSTGRQPPPLSSSRAVSNPPAP 391
Query: 956 PPXXP 970
PP P
Sbjct: 392 PPAIP 396
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.009
Identities = 22/65 (33%), Positives = 22/65 (33%)
Frame = +3
Query: 765 KXPPPPPXPXXXXXXXXXXXTPXXXXXPXPPPPPXPXXPXXPPXXXXXXXXXXXXXPPXX 944
K PPPPP P P P PPP P PP PP
Sbjct: 730 KSPPPPPPAVI---------VPTPAPAPIPVPPPAPIMGGPPP--PPPPPGVAGAGPPPP 778
Query: 945 PPPPP 959
PPPPP
Sbjct: 779 PPPPP 783
Score = 30.3 bits (65), Expect = 0.47
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 860 PPXPPXXXXXPXPXXXXPXXXXXXPXXXPPPPPPXXPPXXXXXXXXPXXXP 1012
PP PP P P P PPPPP P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.62
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 851 PPPPPXPPXXXXXPXPXXXXPXXXXXXPXXXPPPPPP 961
P P P PP P P PPPPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.82
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +2
Query: 773 PPPPXPXPXXXXXXXXXNTTXXXXXXPPPPPXPPXXXXXPXPXXXXPXXXXXXPXXXPPP 952
PPPP P T P PPP P P P P P PPP
Sbjct: 732 PPPPPPAVIVP--------TPAPAPIPVPPPAP--IMGGPPPPPPPPGVAGAGPPP-PPP 780
Query: 953 PPP 961
PPP
Sbjct: 781 PPP 783
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Frame = +2
Query: 851 PPPPPXP--PXXXXXPXPXXXXPXXXXXXPXXXPPP------PPPXXPP 973
PPPPP P P P P PPP PPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.5 bits (58), Expect = 3.3
Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Frame = +2
Query: 854 PPPPXPPXXXXXPXPXXXXPXXXXXXPXXXP--PPPPPXXPP 973
P P P P P P P PPPPP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 7.6
Identities = 18/74 (24%), Positives = 18/74 (24%), Gaps = 3/74 (4%)
Frame = +2
Query: 761 KKXXPPPPX---PXPXXXXXXXXXNTTXXXXXXPPPPPXPPXXXXXPXPXXXXPXXXXXX 931
K PPPP P P PPPPP P P P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Query: 932 PXXXPPPPPPXXPP 973
P P P
Sbjct: 790 SRYYAPAPQAEPEP 803
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.27
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = +3
Query: 780 PPXPXXXXXXXXXXXTPXXXXXPXPPPPP--XPXXPXXPPXXXXXXXXXXXXXPPXXPPP 953
P P P P PPPPP P P PP PP PPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP---------MPAGPPSAPPP 1733
Query: 954 PPP 962
P P
Sbjct: 1734 PLP 1736
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 777 PPPXPXXXXXXXXXXXTPXXXXXPXPPPPPXPXXPXXPP 893
PP P TP PPPP P P PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.36
Identities = 17/67 (25%), Positives = 18/67 (26%)
Frame = +3
Query: 771 PPPPPXPXXXXXXXXXXXTPXXXXXPXPPPPPXPXXPXXPPXXXXXXXXXXXXXPPXXPP 950
PP P P + PPP P P P PP PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 951 PPPPXXP 971
PP P
Sbjct: 204 PPLSQAP 210
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +3
Query: 825 TPXXXXXPXPPPPPXPXXPXXPPXXXXXXXXXXXXXPPXXPPPPPPXXP 971
TP P PP P P P P PPP P P
Sbjct: 132 TPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 5.8
Identities = 19/80 (23%), Positives = 20/80 (25%)
Frame = +2
Query: 773 PPPPXPXPXXXXXXXXXNTTXXXXXXPPPPPXPPXXXXXPXPXXXXPXXXXXXPXXXPPP 952
PPP P T+ PPPPP PP P P
Sbjct: 167 PPPSFQPPSAAAPA----TSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPE 222
Query: 953 PPPXXPPXXXXXXXXPXXXP 1012
PP P P P
Sbjct: 223 IPPTYTPKQADPLPAPPPPP 242
Score = 25.0 bits (52), Expect(2) = 0.52
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 936 PXXPPPPPPXXP 971
P PPPPPP P
Sbjct: 236 PAPPPPPPPTLP 247
Score = 23.4 bits (48), Expect(2) = 0.52
Identities = 10/31 (32%), Positives = 10/31 (32%)
Frame = +3
Query: 870 PXXPXXPPXXXXXXXXXXXXXPPXXPPPPPP 962
P PP P PPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.9
Identities = 23/101 (22%), Positives = 24/101 (23%), Gaps = 4/101 (3%)
Frame = +2
Query: 722 PXXXXPXPXXXXXKKXXPPPPXPXPXXXXXXXXXNTTXXXXXXP---PPPPXPPXXXXX- 889
P P K PP P P + P PP P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 890 PXPXXXXPXXXXXXPXXXPPPPPPXXPPXXXXXXXXPXXXP 1012
P P P P PPP PP P P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 26.6 bits (56), Expect = 5.8
Identities = 20/88 (22%), Positives = 21/88 (23%), Gaps = 4/88 (4%)
Frame = +2
Query: 722 PXXXXPXPXXXXXKKXXPPPPXPXPXXXXXXXXXNTTXXXXXXP----PPPPXPPXXXXX 889
P P K PP P P + P PP P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 890 PXPXXXXPXXXXXXPXXXPPPPPPXXPP 973
P P P PPP PP
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
>SPCPB16A4.05c |||urease accessory protein UREG |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 286
Score = 27.9 bits (59), Expect = 2.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 121 GLXTRDFFRKKDQKFLLKGKFSP 53
G+ T D F ++DQ+FL++ K P
Sbjct: 117 GVVTNDIFTREDQEFLIRNKALP 139
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 3.3
Identities = 21/71 (29%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Frame = -1
Query: 970 GXXGGGGGGXXGGXXXXXXXXXXXXXGGXXGXXGXGGGGGXGXXXXXG--VXXXXXXXXX 797
G GGG GG G G G G GGG G G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Query: 796 XXGXGGGGGXF 764
G GGG G F
Sbjct: 251 LGGFGGGPGGF 261
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 3.3
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 970 GXXGGGGGGXXGGXXXXXXXXXXXXXGGXXGXXGXGGGGG 851
G GGG GG GG G G G GG G
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 27.1 bits (57), Expect = 4.4
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -2
Query: 1011 GXXXGXXXXXXXXGGXXGGGGGGXXXGXXXXXXGXXXXGXGXXXXXGGXGGGGG 850
G G GG GG GG G G G GG GG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 4.4
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 858 PPPXPXXPXXPPXXXXXXXXXXXXXPPXXPPPPPP 962
PP P P PP PP PPPPPP
Sbjct: 5 PPGNPPPPPPPPGFE----------PPSQPPPPPP 29
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,921,460
Number of Sequences: 5004
Number of extensions: 31399
Number of successful extensions: 495
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 547228964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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