Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_C15
(865 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0577 - 10862976-10863215,10863653-10863788,10863906-108640... 255 4e-68
09_02_0576 - 10853361-10853600,10854033-10854168,10854285-108544... 255 4e-68
03_02_0140 + 5864612-5864955,5865154-5865381,5865460-5865814,586... 255 4e-68
03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598 203 2e-52
12_02_1195 + 26906814-26907121,26907771-26907992,26908913-269091... 111 7e-25
09_04_0704 + 19623046-19623386,19623583-19623792,19623872-196242... 106 3e-23
12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388 89 6e-18
12_02_1184 + 26785739-26786113 65 6e-11
12_02_1183 - 26764883-26765174,26765559-26765677 62 4e-10
12_02_1185 + 26786543-26786545,26786676-26786686,26787032-267872... 44 2e-04
02_01_0240 - 1593186-1593323,1593380-1593406 31 1.6
07_03_1120 + 24123822-24124318,24125877-24126006,24127334-241273... 30 2.7
06_02_0364 + 15178583-15178881,15179652-15179723,15179853-151799... 29 3.6
06_01_0476 - 3388176-3389267 28 8.4
03_04_0088 + 17209568-17209876,17209966-17210595,17210846-172110... 28 8.4
>09_02_0577 -
10862976-10863215,10863653-10863788,10863906-10864030,
10864132-10864516,10864571-10864798,10864976-10865319
Length = 485
Score = 255 bits (624), Expect = 4e-68
Identities = 117/181 (64%), Positives = 152/181 (83%), Gaps = 1/181 (0%)
Frame = +1
Query: 172 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 351
G + L +++PF + LPE+ +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 352 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 528
FYW+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGAQKL G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 529 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 708
++I +G+A+ YV++GMYG S++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 124 ILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGIS 183
Query: 709 L 711
L
Sbjct: 184 L 184
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/46 (50%), Positives = 25/46 (54%), Gaps = 10/46 (21%)
Frame = +2
Query: 713 FIATNIC----------ETIVWKAFSPATGNPWVXAXNSKGAVIXL 820
FIATNIC E I+WKAFSP T N A +GAVI L
Sbjct: 185 FIATNICLLLVNLLLHSENIIWKAFSPTTINSGRGA-EFEGAVIAL 229
>09_02_0576 -
10853361-10853600,10854033-10854168,10854285-10854409,
10854487-10854871,10854934-10855161,10855332-10855675
Length = 485
Score = 255 bits (624), Expect = 4e-68
Identities = 117/181 (64%), Positives = 152/181 (83%), Gaps = 1/181 (0%)
Frame = +1
Query: 172 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 351
G + L +++PF + LPE+ +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 352 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 528
FYW+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGAQKL G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 529 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 708
++I +G+A+ YV++GMYG S++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 124 ILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGIS 183
Query: 709 L 711
L
Sbjct: 184 L 184
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/46 (50%), Positives = 25/46 (54%), Gaps = 10/46 (21%)
Frame = +2
Query: 713 FIATNIC----------ETIVWKAFSPATGNPWVXAXNSKGAVIXL 820
FIATNIC E I+WKAFSP T N A +GAVI L
Sbjct: 185 FIATNICLLLVNLLLHSENIIWKAFSPTTINSGRGA-EFEGAVIAL 229
>03_02_0140 +
5864612-5864955,5865154-5865381,5865460-5865814,
5865899-5866023,5866150-5866285,5866382-5866621
Length = 475
Score = 255 bits (624), Expect = 4e-68
Identities = 117/181 (64%), Positives = 152/181 (83%), Gaps = 1/181 (0%)
Frame = +1
Query: 172 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 351
G + L +++PF + LPE+ +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 352 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 528
FYW+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGAQKL G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 529 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 708
++I +G+A+ YV++GMYG S++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 124 ILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGIS 183
Query: 709 L 711
L
Sbjct: 184 L 184
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = +2
Query: 713 FIATNICETIVWKAFSPATGNPWVXAXNSKGAVIXL 820
FIATNICE I+WKAFSP T N A +GAVI L
Sbjct: 185 FIATNICENIIWKAFSPTTINSGRGA-EFEGAVIAL 219
>03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598
Length = 537
Score = 203 bits (495), Expect = 2e-52
Identities = 92/184 (50%), Positives = 133/184 (72%), Gaps = 6/184 (3%)
Frame = +1
Query: 178 KFLEVIKPFCSILPEIAKPE-RKIQFREKVLWTAITLFIFLVCCQIPLFGI----MSSDS 342
+ L++++PF +LPE+ +P+ R++ FR K+ TA LF FL C Q+PL+G+ +
Sbjct: 10 RLLDLVRPFMPLLPEVREPDGRRVPFRRKLACTAAALFAFLACSQLPLYGLHRAAAAGGG 69
Query: 343 ADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQK 519
ADPFYW+R ILASNRGT+MELGI+P+VT+G ++QLL G+ ++ + P DRAL + AQK
Sbjct: 70 ADPFYWVRAILASNRGTVMELGITPVVTAGTLVQLLVGSNLVRADSSNPDDRALLSAAQK 129
Query: 520 LFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGS 699
L +VIT G+A YV++G YG +GAG +L+++QL + G++ + LDELLQKGYG GS
Sbjct: 130 LLSIVITAGEATAYVLSGAYGSVGVLGAGNAVLVVLQLVLGGMVAIFLDELLQKGYGFGS 189
Query: 700 GISL 711
GISL
Sbjct: 190 GISL 193
>12_02_1195 +
26906814-26907121,26907771-26907992,26908913-26909153,
26909512-26909642,26910336-26910474,26910600-26910810,
26911371-26911759
Length = 546
Score = 111 bits (267), Expect = 7e-25
Identities = 60/160 (37%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Frame = +1
Query: 244 IQFREKVLWTAITLFIFLVCCQIPLFGIMS----SDSADPFYWIRVILASNRGTLMELGI 411
+ FR K +TA +L +FLV Q+PL+G+ D DP YW+ + AS+ TLM LGI
Sbjct: 15 VSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDPLYWMNCMFASSNNTLMTLGI 74
Query: 412 SPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPS 591
P++ S + +++ + +I P N A+KL + + + A+ V++ G +
Sbjct: 75 IPLLLSEMAVRIFSA--LIITRWPPFHHVRLNRARKLLAIAMAMVMAVSGVLSA--GVAA 130
Query: 592 EIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISL 711
E+G L+++ QLF+ G+I + LDELLQKGYGL SG+SL
Sbjct: 131 ELGTMASLVVMFQLFLGGMIAIYLDELLQKGYGLLSGVSL 170
>09_04_0704 +
19623046-19623386,19623583-19623792,19623872-19624223,
19624320-19624444,19624578-19624668,19624817-19625050
Length = 450
Score = 106 bits (254), Expect = 3e-23
Identities = 59/172 (34%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Frame = +1
Query: 208 SILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSA---DPFYWIRVILA 378
+++PE+ P++ I R+K +TAI LFIF+ Q+ L+GI DP +W+ +ILA
Sbjct: 12 ALVPEVQCPDQPISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEPDPLHWLHLILA 71
Query: 379 SNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQKLFGMVITVGQAI 555
S+R TL+ GI I+ +++++ KII + + P+ L N AQ+L G+++ + A+
Sbjct: 72 SSRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRLLGILVAILGAV 131
Query: 556 VYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISL 711
+ + + + + LI++Q+ + +IV+ LD++L+KGYGL SGISL
Sbjct: 132 NFYVRSQHFTVNTV------LIMLQILCSDIIVIYLDDVLRKGYGLLSGISL 177
Score = 34.7 bits (76), Expect = 0.096
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 713 FIATNICETIVWKAFSPATGNPWVXAXNSKGAVIXLV 823
F ATNIC I+WKAFSP + + +GAVI V
Sbjct: 178 FTATNICVNILWKAFSPMSVMYPEQSPEFEGAVIAWV 214
>12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388
Length = 483
Score = 88.6 bits (210), Expect = 6e-18
Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 2/181 (1%)
Frame = +1
Query: 172 GIKFLEVIKPFCSILPEIAKP-ERKIQFREKVLWTAI-TLFIFLVCCQIPLFGIMSSDSA 345
G +++P + P + + E + FR +V TA +L + L +PL+
Sbjct: 13 GTALWRLLRPLAVLGPRMQRRREAAVPFRGQVRNTAAASLLLLLSLSHVPLYAGAGDADP 72
Query: 346 DPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLF 525
DP +W R +LA+ RGT+MELG++P+VTS ++++LLA ++ D+ A +
Sbjct: 73 DPLFWARPLLAAPRGTVMELGVAPVVTSWVVVRLLAA--LLFDSDSSTTVASCELLARCL 130
Query: 526 GMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGI 705
V + ++ + + G GAG L+++QLF G++V+L D L + GYG+ G+
Sbjct: 131 AYVTNASRLVIGIAAAL-GMCGSGGAGNAALVVLQLFAGGVVVVLADLLHETGYGV-EGV 188
Query: 706 S 708
S
Sbjct: 189 S 189
>12_02_1184 + 26785739-26786113
Length = 124
Score = 65.3 bits (152), Expect = 6e-11
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = +1
Query: 244 IQFREKVLWTAITLFIFLVCCQIPLFGIMS---SDSADPFYWIRVILASNRGTLMELGIS 414
+ FR KVL+TA++L +FLV ++ L+G+ + DP YW+ + AS R T+M LG+
Sbjct: 33 VSFRRKVLYTAVSLLVFLVAGELLLYGVQNYYGGGEHDPRYWMNAMSASLRPTVMALGLV 92
Query: 415 PIVTSGLIMQLLAGAKIIEVGD 480
P++ S +++ L KII V D
Sbjct: 93 PLLYSEMVVHLCMALKIIGVHD 114
>12_02_1183 - 26764883-26765174,26765559-26765677
Length = 136
Score = 62.5 bits (145), Expect = 4e-10
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Frame = +1
Query: 244 IQFREKVLWTAITLFIFLVCCQIPLFGIMS----SDSADPFYWIRVILASNRGTLMELGI 411
+ FR K +TA +L +FLV Q+PL+G+ D DP YW+ + AS+ TLM LGI
Sbjct: 48 VSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDPLYWMNCMFASSNNTLMTLGI 107
Query: 412 SPIVTSGLIMQLLA 453
P++ S + +++ +
Sbjct: 108 IPLLLSEMAVRIFS 121
>12_02_1185 +
26786543-26786545,26786676-26786686,26787032-26787262,
26787892-26788012,26788263-26788393,26788718-26788760,
26788963-26789220
Length = 265
Score = 44.0 bits (99), Expect = 2e-04
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 514 QKLFGMVITVGQ--AIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGY 687
++LF M I + AIV + + G I L+ + QL GLI + LD+LL+KGY
Sbjct: 9 RRLFAMQIAIVSPVAIVLYASAIAGGTPFITTAA-LVFVFQLIAGGLIAIYLDDLLRKGY 67
Query: 688 GLGSGISL 711
G SG+SL
Sbjct: 68 GFLSGLSL 75
>02_01_0240 - 1593186-1593323,1593380-1593406
Length = 54
Score = 30.7 bits (66), Expect = 1.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 300 MLPDSLIWYNVIRQCRSLLLDPCNSCIKQRDI 395
++ D L+W + R C+S ++P C R I
Sbjct: 15 LISDGLLWLAIARCCKSTCMEPIQGCFLSRQI 46
>07_03_1120 +
24123822-24124318,24125877-24126006,24127334-24127379,
24128364-24128455,24128550-24128630,24128735-24128832,
24128972-24129053,24129166-24129258
Length = 372
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 681 RIWIGFWYLSGLLLQTSVKPLYGRHFHQPLVT 776
+++ GFW + + LQ S P +G FH PLVT
Sbjct: 312 KLFRGFWPTAAVYLQKS--PTFGWIFHHPLVT 341
>06_02_0364 +
15178583-15178881,15179652-15179723,15179853-15179917,
15180890-15180934,15182493-15183170,15183376-15183410,
15183647-15183736,15183896-15183985,15184164-15184262,
15184938-15185013,15185473-15185588
Length = 554
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 639 HKQLYDNEEAHSGTNFTGFAIHSSHYINNSLTNSNHHTK*FLCT--IKQSPVFRSVT-NF 469
H +L D +EA SG G H H ++ HH L T I+ + SV +F
Sbjct: 112 HSRLIDLKEASSGFELMGMHRHRQHRVDFMEWAPGHHVGVALITMPIRAGARYCSVVGDF 171
Query: 468 NDFSTSK 448
N +ST++
Sbjct: 172 NQWSTTE 178
>06_01_0476 - 3388176-3389267
Length = 363
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 607 VCLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 702
V +++ + LFV+GL+ LL+ LL++G G G
Sbjct: 33 VLVILAVVLFVSGLLHLLVRFLLRRGRGRDGG 64
>03_04_0088 +
17209568-17209876,17209966-17210595,17210846-17211019,
17211434-17211515,17212091-17212278,17212993-17213152,
17213441-17213763,17213860-17213967,17214116-17214189,
17214249-17214361,17214461-17214741
Length = 813
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 680 KDMDWVLVSLWFIATNICETIVWKAFSPATGNPW 781
++++W+LV + T V++A PA GNP+
Sbjct: 35 QEVEWMLVGKVLSPAIVHATTVFRAMKPARGNPY 68
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,886,235
Number of Sequences: 37544
Number of extensions: 507085
Number of successful extensions: 1281
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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