Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_C15
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-10|CAB16516.1|  473|Caenorhabditis elegans Hypothetical p...   350   9e-97
U55364-11|AAA97976.1|  196|Caenorhabditis elegans Hypothetical p...    31   1.1  
AF025454-9|AAK68371.1|  331|Caenorhabditis elegans Serpentine re...    30   1.9  
AF024500-1|AAB70364.1|  339|Caenorhabditis elegans Hypothetical ...    29   3.2  
AC024881-7|AAK71417.1|  310|Caenorhabditis elegans Serpentine re...    29   4.3  
AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and bel...    29   5.7  
AL032660-1|CAA21752.1|  711|Caenorhabditis elegans Hypothetical ...    28   7.5  
AF016418-7|AAK18898.1|  248|Caenorhabditis elegans Hypothetical ...    28   9.9  
AF016418-6|AAK18899.1|  248|Caenorhabditis elegans Hypothetical ...    28   9.9  

>Z99281-10|CAB16516.1|  473|Caenorhabditis elegans Hypothetical
           protein Y57G11C.15 protein.
          Length = 473

 Score =  350 bits (860), Expect = 9e-97
 Identities = 162/181 (89%), Positives = 177/181 (97%)
 Frame = +1

Query: 169 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 348
           MGIKFLE +KPFC  +PE++KPERKIQFREK+LWTAITLF+FLVCCQIPLFGIMS+DSAD
Sbjct: 1   MGIKFLEFVKPFCGFVPEVSKPERKIQFREKMLWTAITLFVFLVCCQIPLFGIMSTDSAD 60

Query: 349 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 528
           PFYW+RVI+ASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
Sbjct: 61  PFYWLRVIMASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120

Query: 529 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 708
           MVITVGQAIVYVM+G+YGEPSEIGAG+CLLI++QL +AGLIVLLLDELLQKGYGLGSGIS
Sbjct: 121 MVITVGQAIVYVMSGLYGEPSEIGAGICLLIVVQLVIAGLIVLLLDELLQKGYGLGSGIS 180

Query: 709 L 711
           L
Sbjct: 181 L 181



 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 25/36 (69%), Positives = 26/36 (72%)
 Frame = +2

Query: 713 FIATNICETIVWKAFSPATGNPWVXAXNSKGAVIXL 820
           FIATNICETIVWKAFSPAT N        +GAVI L
Sbjct: 182 FIATNICETIVWKAFSPATMNTG-RGTEFEGAVIAL 216


>U55364-11|AAA97976.1|  196|Caenorhabditis elegans Hypothetical
           protein F21C10.4 protein.
          Length = 196

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 656 CCSMNCSRKDMDWVLVSLWFI 718
           CC M C     DW+ V++WFI
Sbjct: 163 CCGMECCNNIGDWLGVAIWFI 183


>AF025454-9|AAK68371.1|  331|Caenorhabditis elegans Serpentine
           receptor, class i protein61 protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +1

Query: 223 IAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVIL 375
           IAK  RK      V+W  +  FI  +C  + LF     D      +IRV L
Sbjct: 119 IAKTLRKYIMPRWVVWCVLGFFIVYICAVVGLFSQTRRDEMHQMEYIRVNL 169


>AF024500-1|AAB70364.1|  339|Caenorhabditis elegans Hypothetical
           protein K06H6.5 protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/56 (26%), Positives = 22/56 (39%)
 Frame = +2

Query: 608 CASSLSYNCLWPVLLCCCSMNCSRKDMDWVLVSLWFIATNICETIVWKAFSPATGN 775
           C    S + L   L+C  S     +D +  L   W      C+ I W A++P   N
Sbjct: 90  CIVRKSMSQLTTNLMCYLSNTALYEDRNRTLSDTWAARKGSCDNIAWSAYAPLYEN 145


>AC024881-7|AAK71417.1|  310|Caenorhabditis elegans Serpentine
           receptor, class sx protein3 protein.
          Length = 310

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +1

Query: 184 LEVIKPFCSI--LPEIAKPERKIQFREKVLWTAITLFIFLVCCQ 309
           L V   FC +  LP        IQ R  + + AI+L+IF +C Q
Sbjct: 52  LSVSHIFCLLFELPNAVLLFTGIQLRRNICFPAISLYIFFICAQ 95


>AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform c protein.
          Length = 660

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -2

Query: 663 EQQHNKTGHKQLYDNEEAHSGTNFTGFAIHSSHYINNSLTNSN 535
           +QQH K G+ + ++N + +  + +  FA  S +  NN+   SN
Sbjct: 54  QQQHFKMGYSENFENFDENGSSGYNNFA-DSGNGFNNNGAESN 95


>AL032660-1|CAA21752.1|  711|Caenorhabditis elegans Hypothetical
           protein Y70G10A.2 protein.
          Length = 711

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -2

Query: 636 KQLYD--NEEAHSGTNFTGFAIHSSHYINN 553
           K +Y+   +EAH+ TNF    I  SHY NN
Sbjct: 679 KDIYELTRDEAHAQTNFMNSIILFSHYGNN 708


>AF016418-7|AAK18898.1|  248|Caenorhabditis elegans Hypothetical
           protein C49G7.3 protein.
          Length = 248

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 17/76 (22%), Positives = 32/76 (42%)
 Frame = +2

Query: 587 PVKLVPECASSLSYNCLWPVLLCCCSMNCSRKDMDWVLVSLWFIATNICETIVWKAFSPA 766
           P  +VP+  S+   NC     LCC + +    ++ +  ++   I    C + VW+    A
Sbjct: 86  PAPVVPDMRSAALKNCARTCGLCCKTSDFDCPNVQFPRLTCSTITNEQCRSSVWRTII-A 144

Query: 767 TGNPWVXAXNSKGAVI 814
           T  P      ++G  +
Sbjct: 145 TDCPSACGFCNQGGCV 160


>AF016418-6|AAK18899.1|  248|Caenorhabditis elegans Hypothetical
           protein C49G7.4 protein.
          Length = 248

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 17/76 (22%), Positives = 32/76 (42%)
 Frame = +2

Query: 587 PVKLVPECASSLSYNCLWPVLLCCCSMNCSRKDMDWVLVSLWFIATNICETIVWKAFSPA 766
           P  +VP+  S+   NC     LCC + +    ++ +  ++   I    C + VW+    A
Sbjct: 86  PAPVVPDMRSAALKNCARTCGLCCKTADFDCPNVQFPRLTCSTITNEQCRSSVWRTII-A 144

Query: 767 TGNPWVXAXNSKGAVI 814
           T  P      ++G  +
Sbjct: 145 TDCPSACGFCNQGGCV 160


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,101,613
Number of Sequences: 27780
Number of extensions: 456199
Number of successful extensions: 1236
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)