Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_C13
(929 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.014
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.014
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.057
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.076
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 28 0.10
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 0.36
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.71
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 1.1
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 23 3.8
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 8.7
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.014
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 7/60 (11%)
Frame = +2
Query: 623 PXPPPP-------PPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPT 781
P PPPP PP G P PPPP PP P P P P+
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/81 (24%), Positives = 21/81 (25%)
Frame = +1
Query: 685 PPPPXPXXAXXXXXXPXXXTXXPXPPPXPXXXXPPPXXXXXXXPXXPPXXPXXFXXXXXX 864
PPP P + P PP P PP P PP P
Sbjct: 391 PPPAIPGRSAPALP-PLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL 449
Query: 865 XPPPPXKXXXPXXXPPXPXXP 927
P P P P P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLP 470
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = +2
Query: 623 PXPPPPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXGXX 802
P PPP PP G P PP P T P P P +
Sbjct: 251 PAPPPIPPPSNGTV---SSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAAN 307
Query: 803 XXXXPXPPP 829
P PPP
Sbjct: 308 KKRPPPPPP 316
Score = 30.3 bits (65), Expect = 0.40
Identities = 22/86 (25%), Positives = 23/86 (26%), Gaps = 5/86 (5%)
Frame = +1
Query: 685 PPPPXPXXAXXXXXXPXXXTXXPXPPPXPXXXXP-----PPXXXXXXXPXXPPXXPXXFX 849
PPPP P + P PPP P P PP PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 850 XXXXXXPPPPXKXXXPXXXPPXPXXP 927
PP PP P P
Sbjct: 397 GRSAPALPPLGNASR-TSTPPVPTPP 421
Score = 29.9 bits (64), Expect = 0.53
Identities = 18/68 (26%), Positives = 18/68 (26%)
Frame = +2
Query: 623 PXPPPPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXGXX 802
P PPP K PPPP P PP P P P
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLP--PPPPPPRSNA 347
Query: 803 XXXXPXPP 826
P PP
Sbjct: 348 AGSIPLPP 355
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/76 (23%), Positives = 18/76 (23%)
Frame = +1
Query: 685 PPPPXPXXAXXXXXXPXXXTXXPXPPPXPXXXXPPPXXXXXXXPXXPPXXPXXFXXXXXX 864
P PP P PPP PP PP P
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGS 350
Query: 865 XPPPPXKXXXPXXXPP 912
P PP P PP
Sbjct: 351 IPLPPQGRSAPPPPPP 366
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/67 (25%), Positives = 19/67 (28%), Gaps = 7/67 (10%)
Frame = +2
Query: 608 GGGXXPXPPPPPPXXGG-------XXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXP 766
G PPPPPP + P PPPP PP + P
Sbjct: 330 GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP 389
Query: 767 XXXPTXP 787
P P
Sbjct: 390 APPPAIP 396
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = +2
Query: 629 PPPPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXGXXXX 808
P P PP P PP P P P P P P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP-PLPAGMPAAP---PLPP 471
Query: 809 XXPXPPP 829
P PPP
Sbjct: 472 AAPAPPP 478
Score = 27.9 bits (59), Expect = 2.2
Identities = 21/97 (21%), Positives = 22/97 (22%)
Frame = +2
Query: 623 PXPPPPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXGXX 802
P P P KP PPP P P P G
Sbjct: 271 PPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNG 330
Query: 803 XXXXPXPPPXXPXXFXXXXXXPXPXXKKXXXPXXXPR 913
PPP P P P + P PR
Sbjct: 331 SSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Score = 27.5 bits (58), Expect = 2.8
Identities = 23/90 (25%), Positives = 23/90 (25%), Gaps = 8/90 (8%)
Frame = +2
Query: 629 PPPPPPXXGGXXXXKKKP--------XPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTX 784
PP PPP G P PP P P P PP P P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP-PSAPPSLPPSAPPSLPMGAPAA 446
Query: 785 PXXGXXXXXXPXPPPXXPXXFXXXXXXPXP 874
P P P P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/82 (21%), Positives = 18/82 (21%)
Frame = +3
Query: 681 PTPPPXXPXXXXXXXXPXXXHXXXPPPXPPXXXXTPXXXXXPXXXPXPPXXPPXXXXXXX 860
P PPP P P P P P PP P
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Query: 861 LXPXPXXKXXXXXXXXPAPPXP 926
L P APP P
Sbjct: 449 LPPSAPIAPPLPAGMPAAPPLP 470
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.014
Identities = 25/101 (24%), Positives = 25/101 (24%), Gaps = 1/101 (0%)
Frame = +2
Query: 629 PPPPPPXXGGXXXXKKK-PXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXGXXX 805
PP P P K PP P P P P P P P P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAP--PVPVPSGAPPVPKPSVAA 1149
Query: 806 XXXPXPPPXXPXXFXXXXXXPXPXXKKXXXPXXXPRXPXPP 928
P P P P P P P PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Score = 33.1 bits (72), Expect = 0.057
Identities = 22/98 (22%), Positives = 22/98 (22%)
Frame = +2
Query: 635 PPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXGXXXXXX 814
PP P G K PP P P P P P P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 815 PXPPPXXPXXFXXXXXXPXPXXKKXXXPXXXPRXPXPP 928
P P P P P P PP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Score = 31.9 bits (69), Expect = 0.13
Identities = 24/105 (22%), Positives = 25/105 (23%), Gaps = 4/105 (3%)
Frame = +2
Query: 623 PXPPPPPPXXGGXXXXKKK----PXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPX 790
P PP P K P PPP P P + P P P P P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK 1096
Query: 791 XGXXXXXXPXPPPXXPXXFXXXXXXPXPXXKKXXXPXXXPRXPXP 925
P P P P P P P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 31.1 bits (67), Expect = 0.23
Identities = 24/100 (24%), Positives = 24/100 (24%), Gaps = 3/100 (3%)
Frame = +2
Query: 635 PPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXX---TXXXPXPXPXXXPTXPXXGXXX 805
PP P G K PP P P PP P P P P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPA--PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV 1207
Query: 806 XXXPXPPPXXPXXFXXXXXXPXPXXKKXXXPXXXPRXPXP 925
P P P P P P P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 29.9 bits (64), Expect = 0.53
Identities = 17/69 (24%), Positives = 17/69 (24%)
Frame = +2
Query: 632 PPPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXGXXXXX 811
PP P G K PP P P P P P P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 812 XPXPPPXXP 838
P P P
Sbjct: 1229 VPVPTAKAP 1237
Score = 29.9 bits (64), Expect = 0.53
Identities = 21/90 (23%), Positives = 21/90 (23%)
Frame = +2
Query: 629 PPPPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXGXXXX 808
PP P P G PP P P PP P P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPV-PVPTAKAP 1237
Query: 809 XXPXPPPXXPXXFXXXXXXPXPXXKKXXXP 898
P P P P P P
Sbjct: 1238 PVPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 27.9 bits (59), Expect = 2.2
Identities = 22/101 (21%), Positives = 22/101 (21%), Gaps = 2/101 (1%)
Frame = +2
Query: 629 PPPPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXGXXXX 808
PP P P PP P P P P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 809 XXPXPPP--XXPXXFXXXXXXPXPXXKKXXXPXXXPRXPXP 925
P P P P P P P P P
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 27.5 bits (58), Expect = 2.8
Identities = 22/88 (25%), Positives = 22/88 (25%), Gaps = 7/88 (7%)
Frame = +1
Query: 685 PPPPXPXXAXXXXXXPXXXTXXPXPP------PXPXXXXPP-PXXXXXXXPXXPPXXPXX 843
PP P P A P P P P P PP P P PP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 844 FXXXXXXXPPPPXKXXXPXXXPPXPXXP 927
PP P P P P
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Score = 26.6 bits (56), Expect = 5.0
Identities = 25/102 (24%), Positives = 25/102 (24%)
Frame = +2
Query: 623 PXPPPPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXGXX 802
P PP P G K PP P P PP P P P P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPK--PSVAVPPV-------PAPSGAPPVPKPSVA 1129
Query: 803 XXXXPXPPPXXPXXFXXXXXXPXPXXKKXXXPXXXPRXPXPP 928
P P P P P P P PP
Sbjct: 1130 APPVPVPSGAPPVPKPSVAAPPVP-APSGAPPVPKPSVAAPP 1170
Score = 25.8 bits (54), Expect = 8.7
Identities = 22/104 (21%), Positives = 22/104 (21%), Gaps = 3/104 (2%)
Frame = +2
Query: 623 PXPPPPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXP---XXXPTXPXX 793
P P PP P P P P PP P P P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 794 GXXXXXXPXPPPXXPXXFXXXXXXPXPXXKKXXXPXXXPRXPXP 925
P P P P P P P P
Sbjct: 1175 SSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.1 bits (72), Expect = 0.057
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 623 PXPPPPPPXXGGXXXXKKKPXPPPPXP 703
P PPPPPP G P PPPP P
Sbjct: 761 PPPPPPPPGVAGAG----PPPPPPPPP 783
Score = 32.3 bits (70), Expect = 0.10
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Frame = +2
Query: 671 KKKPXPPP----PXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXGXXXXXXPXPPPXXP 838
K P PPP P P P PP P P P P G P PPP P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP------PPPGVAGAGPPPPPPPPP 783
Score = 32.3 bits (70), Expect = 0.10
Identities = 18/65 (27%), Positives = 18/65 (27%)
Frame = +2
Query: 629 PPPPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXGXXXX 808
PPPPP P PPP P PP P P P G
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 809 XXPXP 823
P P
Sbjct: 793 YAPAP 797
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = +2
Query: 629 PPPPPP-XXGGXXXXKKKPXPPP-PXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXG 796
PPPPPP P PPP P P PP P P P P G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 31.1 bits (67), Expect = 0.23
Identities = 22/78 (28%), Positives = 23/78 (29%), Gaps = 4/78 (5%)
Frame = +1
Query: 676 KTXPPPPX----PXXAXXXXXXPXXXTXXPXPPPXPXXXXPPPXXXXXXXPXXPPXXPXX 843
K+ PPPP P A P PPP P PPP P PP P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP----PPPGVAGAGPPPPPPPPPAV 785
Query: 844 FXXXXXXXPPPPXKXXXP 897
P P P
Sbjct: 786 SAGGSRYYAPAPQAEPEP 803
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +1
Query: 757 PPPXPXXXXPPPXXXXXXXPXXPPXXPXXFXXXXXXXPPPPXKXXXPXXXPPXPXXP 927
PPP P P P P P P PPPP PP P P
Sbjct: 733 PPPPPAVIVPTPA------PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +2
Query: 623 PXP-PPPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPP 733
P P PPP P GG P PPPP PP
Sbjct: 748 PIPVPPPAPIMGGPP-----PPPPPPGVAGAGPPPPPP 780
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +2
Query: 611 GGXXPXPPPPPPXXGGXXXXKKKPXP 688
G P PPPPPP P P
Sbjct: 772 GAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 608 GGGXXPXPPPPPPXXGG 658
G G P PPPPP G
Sbjct: 772 GAGPPPPPPPPPAVSAG 788
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.076
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 623 PXPPPPPPXXGGXXXXKKKPXPPPP 697
P PPPPP G + P PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 680 PXPPPPXPXXXPXXXXPP 733
P PPPP P P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPP 26
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 614 GXXPXPPPPPPXXGGXXXXKKKPXP 688
G P PPPPPP +P P
Sbjct: 303 GGLPPPPPPPPPSNDFWKDSNEPAP 327
Score = 27.5 bits (58), Expect(2) = 0.10
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 611 GGXXPXPPPPPP 646
GG P PPPPPP
Sbjct: 303 GGLPPPPPPPPP 314
Score = 23.4 bits (48), Expect(2) = 0.10
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 629 PPPPPPXXGGXXXXKKKPXPPP 694
PPPPPP K P P
Sbjct: 306 PPPPPPPPPSNDFWKDSNEPAP 327
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.5 bits (58), Expect(2) = 0.36
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 686 PPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPT 781
PPPP P P P T P P PT
Sbjct: 356 PPPPPPMPAPIYNVPNVPTVPTVSPNPFLQPT 387
Score = 21.4 bits (43), Expect(2) = 0.36
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 614 GXXPXPPPPPP 646
G P PPPP P
Sbjct: 353 GSRPPPPPPMP 363
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.71
Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Frame = +2
Query: 680 PXPPPPXPXXXPXXXXPPXXTXXXPXPXPXXXPTXPXXGXXXXXXP-XPPPXXP 838
P P P P PP + P P P P P P PPP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Frame = +2
Query: 611 GGXXPXPP---PPPPXXGGXXXXKKKPXPPPPXPXXXPXXXXPPXXTXXXPXPXP 766
GG P P PP P PPPP P PP P P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 8.7
Identities = 19/78 (24%), Positives = 21/78 (26%), Gaps = 9/78 (11%)
Frame = +2
Query: 623 PXPPPPPPXXGGXXXXKKKPXPPPPXPXXXPXXXX---------PPXXTXXXPXPXPXXX 775
P PP P +P PPP P P PP P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 776 PTXPXXGXXXXXXPXPPP 829
P+ P PPP
Sbjct: 188 PSLPSAVPPMPPKVPPPP 205
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 680 PXPPPPXPXXXPXXXXPPXXT 742
P PPPP P PP T
Sbjct: 5 PPPPPPAPAPAAAAPAPPLMT 25
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 623 PXPPPPPP 646
P PPPPPP
Sbjct: 3 PAPPPPPP 10
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 23.4 bits (48), Expect(2) = 3.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 623 PXPPPPPP 646
P PPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 21.8 bits (44), Expect(2) = 3.8
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +2
Query: 629 PPPPPPXXGGXXXXKKKPXPPPP 697
PPPPPP K +P P
Sbjct: 371 PPPPPPPELLNHSPKSRPLGDKP 393
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 696 GGGGXGFFXXXXXPPXXGGGGGGXG 622
GGG GF PP GG GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFG 211
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,199,452
Number of Sequences: 5004
Number of extensions: 34878
Number of successful extensions: 279
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -