Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_C13
         (929 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    25   0.74 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.98 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   1.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   3.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.9  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 25.4 bits (53), Expect = 0.74
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 623 PXPPPPPPXXGGXXXXK 673
           P PPPPPP   G    K
Sbjct: 341 PAPPPPPPSSSGPDSAK 357



 Score = 22.2 bits (45), Expect = 6.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 677 KPXPPPPXP 703
           KP PPPP P
Sbjct: 340 KPAPPPPPP 348


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 25.0 bits (52), Expect = 0.98
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 623  PXPPPPPPXXG 655
            P PPPPPP  G
Sbjct: 1355 PPPPPPPPSSG 1365



 Score = 22.6 bits (46), Expect = 5.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 629  PPPPPPXXGG 658
            PPPPPP   G
Sbjct: 1356 PPPPPPPSSG 1365


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/29 (34%), Positives = 10/29 (34%)
 Frame = +2

Query: 752 PXPXPXXXPTXPXXGXXXXXXPXPPPXXP 838
           P P P   P  P  G        PPP  P
Sbjct: 23  PQPSPHQSPQAPQRGSPPNPSQGPPPGGP 51


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 623  PXPPPPPP 646
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 93  PPKQTQKWNSQXGW 134
           PP + Q+WN    W
Sbjct: 96  PPNKLQQWNEDLNW 109


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 93  PPKQTQKWNSQXGW 134
           PP + Q+WN    W
Sbjct: 111 PPNKLQQWNEDLNW 124


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 632 PPPPPXXGG 658
           PPPPP  GG
Sbjct: 376 PPPPPIRGG 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,577
Number of Sequences: 438
Number of extensions: 8362
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)