Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_C12
(887 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 38 5e-04
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 36 0.001
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 36 0.001
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 36 0.001
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 36 0.002
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 33 0.009
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 32 0.027
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 31 0.062
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 30 0.082
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 30 0.082
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 30 0.11
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 25 3.1
AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein. 23 9.4
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 37.5 bits (83), Expect = 5e-04
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Frame = -2
Query: 526 IAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKDTQHFKISGYNSHYHNAQNEHGGV 347
+AQ N+ + LLS+ + E+ DI +++E + T G +S ++ G
Sbjct: 3 VAQINLNHCEEAQALLSQVMVEEIGDIAIVSEPYSAPT------GSSSW---VADKTGNA 53
Query: 346 AILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRIS-KLRNIIR 170
AI + IQ + ++ N + Y PPS R L N++
Sbjct: 54 AIWVT-----GTIQRVVSNTFEGFCIA---EVNGVFFCSCYAPPSWELERFHVMLDNLVA 105
Query: 169 DLP--KPIYVAGDFNAHHVAFGCMTTKSRGHQVI 74
+L +P+ +AGDFNA V +G T SRG V+
Sbjct: 106 ELDGHRPLVIAGDFNAWAVEWGSKRTNSRGDAVL 139
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 36.3 bits (80), Expect = 0.001
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = -2
Query: 250 NHLTILCVYCPPSNGSFRISKLRN----IIRDLPKPIYVAGDFNAHHVAFGCMTTKSRG 86
N +TI+ Y P+ G + ++ +IR P+ + +AGDFNA H A+G TK +G
Sbjct: 81 NGITIVYYYVKPNVGVRQFEEIMERIDILIRGHPR-VLLAGDFNAWHTAWGSERTKPKG 138
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 36.3 bits (80), Expect = 0.001
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -2
Query: 250 NHLTILCVYCPPSNGSFRISKLRNII----RDLPKPIYVAGDFNAHHVAFGCMTTKSRGH 83
N + +C Y PS G ++ I R P+ ++ AGD NA H A+G T ++G
Sbjct: 81 NDVLFICCYVSPSAGVSEFEEVMQRIDVLARGHPRVVF-AGDLNAWHTAWGSCRTNAKGE 139
Query: 82 QVIR 71
V++
Sbjct: 140 AVVQ 143
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 36.3 bits (80), Expect = 0.001
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 3/154 (1%)
Frame = -2
Query: 526 IAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKDTQHFKISGYNSHYHNAQNEHGGV 347
I Q N+ + +L + L E+ D+ +L+E + SG N+ ++ G
Sbjct: 3 IVQLNLNHCEEVQDMLGQLLIEEKGDVAMLSEPYRCP------SGVNNWVSDST---GTA 53
Query: 346 AILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRISKLRNIIRD 167
AI F I +R + + N +T Y PP + ++ I D
Sbjct: 54 AIWASGRFPIQQIISRHGEGYVIAVI------NKITFCSCYAPPRWDLEKFEEMLKRISD 107
Query: 166 LP---KPIYVAGDFNAHHVAFGCMTTKSRGHQVI 74
PI ++GDFNA +G +T +RG+ V+
Sbjct: 108 EVYDVNPIIISGDFNAWATEWGSKSTNARGNAVL 141
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 35.9 bits (79), Expect = 0.002
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Frame = -2
Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKDTQHFKISGYNSHYHNAQNEHG 353
L I Q+N + L + +++D+ LL+E + + N ++ +E
Sbjct: 2 LNILQFNANHCENAQDLALHVITTESLDVLLLSEPYC-------VPRNNGNW--VTDESK 52
Query: 352 GVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNHLTILCVYCPPSNG--SFR--ISKL 185
VAI++ + I + R Q + VA V G TI+ Y P G FR + K+
Sbjct: 53 TVAIVVNGN-RLPIQRIRHRQTLGVVAAD--VGGT--TIVSCYVSPQTGVPEFRSIMEKI 107
Query: 184 RNIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRGHQVIR 71
I+R + + +AGDFNA H+ +G T +G ++++
Sbjct: 108 DLIVRGCSR-VLLAGDFNAMHLDWGSSRTCPKGLELLQ 144
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 33.5 bits (73), Expect = 0.009
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = -2
Query: 244 LTILCVYCPPSNGSFRISKLRNIIR---DLPKPIYVAGDFNAHHVAFGCMTTKSRGHQVI 74
+T + VY PPS + +L I + VAGDFNA H +G RG +++
Sbjct: 148 ITFISVYAPPSLSAHEFERLLGAIELEAASHSRVVVAGDFNAWHEEWGSGRNGQRGIELL 207
Query: 73 R 71
+
Sbjct: 208 Q 208
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 31.9 bits (69), Expect = 0.027
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -2
Query: 244 LTILCVYCPPSNGSFRISKLRNIIR---DLPKPIYVAGDFNAHHVAFGCMTTKSRGHQVI 74
+ + VY PPS +L + + +AGDFNA H +G RG +++
Sbjct: 85 IDFISVYAPPSLSPQEYERLLEAVELEASSHSHVVIAGDFNAWHTEWGSRRNNLRGEELL 144
Query: 73 R 71
+
Sbjct: 145 Q 145
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 30.7 bits (66), Expect = 0.062
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -2
Query: 244 LTILCVYCPPS---NGSFRISKLRNIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRGHQVI 74
+T L Y PPS G + + + VAGDFNA H +G + RG ++
Sbjct: 142 ITFLSCYAPPSLSREGFAEFVEAIELEAQSHPQVVVAGDFNAWHEEWGSRRSNERGEVLL 201
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 30.3 bits (65), Expect = 0.082
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -2
Query: 253 GNHLTILCVYCPPSNGSFRISKLRNIIR--DLPKP-IYVAGDFNAHHVAFGCMTTKSRGH 83
G + I C Y PPS + I P + VAGDFNA H +G T RG
Sbjct: 94 GGVVFISC-YAPPSLNLAEFERFLEAIELEGFSHPQVVVAGDFNARHEEWGSPRTCDRGE 152
Query: 82 QV 77
++
Sbjct: 153 EL 154
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 30.3 bits (65), Expect = 0.082
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 154 IYVAGDFNAHHVAFGCMTTKSRGHQVI 74
+ + GDFNA H A+G TK +G +++
Sbjct: 116 VVLGGDFNAWHEAWGSARTKRKGEELL 142
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 29.9 bits (64), Expect = 0.11
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -2
Query: 241 TILCVYCPPSNGSFRISKLRNIIRD---LPKPIYVAGDFNAHHVAFGCMTTKSRGHQVI 74
T L Y PP + + ++ + +AGDFNA HV +G +G +++
Sbjct: 87 TFLSCYAPPRQPTDEFERFIEAVQLETLTHSQVVIAGDFNAWHVEWGSERNSEKGEELL 145
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 25.0 bits (52), Expect = 3.1
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +2
Query: 128 SVEISSHIYWLRQISNYITQFTY 196
S E + ++ WL+ +SN++ F Y
Sbjct: 1498 SDETTKNLPWLKSVSNFLGSFNY 1520
>AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein.
Length = 897
Score = 23.4 bits (48), Expect = 9.4
Identities = 13/58 (22%), Positives = 26/58 (44%)
Frame = -2
Query: 493 KKPLLSKFLAEQNVDICLLNETWLKDTQHFKISGYNSHYHNAQNEHGGVAILIKPYFK 320
+K L+ KF E+ +D + WL H ++ + ++++H + I Y K
Sbjct: 517 RKRLMVKFKGEEGLDYGGVAREWLYLLSHEMLNPQYGLFQYSRDDHYSLQINPDSYLK 574
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,317
Number of Sequences: 2352
Number of extensions: 15732
Number of successful extensions: 77
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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