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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_C12
         (887 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17214-2|AAA28508.1|  858|Drosophila melanogaster protein ( D.me...    79   1e-14
X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    78   2e-14
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    77   2e-14
M38643-2|AAA28940.1|  192|Drosophila melanogaster protein ( D.me...    62   1e-09
M22874-2|AAA28675.1|  916|Drosophila melanogaster protein ( D.me...    62   1e-09
AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    60   3e-09
AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p pro...    57   4e-08
AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.      56   9e-08
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ...    49   8e-06
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ...    48   2e-05
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ...    45   1e-04
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ...    45   1e-04
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ...    45   1e-04
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.       43   5e-04
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever...    43   7e-04
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ...    36   0.075

>M17214-2|AAA28508.1|  858|Drosophila melanogaster protein (
           D.melanogaster Fw repetitiveelement putative reverse
           transcriptase, complete cds,and putative binding
           protein, 3' end. ).
          Length = 858

 Score = 78.6 bits (185), Expect = 1e-14
 Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKDTQHFKISGYNSH--YHNAQNE 359
           L IA +N   + ++K  L++FL E+++D+ LL+ET L    +F+I  Y+ +   H     
Sbjct: 4   LRIATWNANGVSQRKLELAQFLHEKHIDVMLLSETHLTSKYNFQIRDYHFYGTNHPDGKA 63

Query: 358 HGGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNH-LTILCVYCPPSNGSFRISKLR 182
           HGG AILI+   K++  +      +Q  ++++ +  N  LT+  VYCPP   +   ++  
Sbjct: 64  HGGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPP-RFTVLEAQFL 122

Query: 181 NIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRGHQVIR 71
           +  + L      AGD+NA H  +G      +G Q+ +
Sbjct: 123 DFFQALGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYK 159


>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 77.8 bits (183), Expect = 2e-14
 Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKDTQHFKISGYNSH--YHNAQNE 359
           L I+ +N   + R    L++F+ E+N+D+ LL+ET L +  +F I GY  +   H     
Sbjct: 4   LRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTNKNNFHIPGYLFYGTNHPDGKA 63

Query: 358 HGGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRIS--KL 185
           HGG  ILI+   K++ +       +Q+ +++L ++    T+  VYCPP    F IS  + 
Sbjct: 64  HGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCPP---RFPISEDQF 120

Query: 184 RNIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRGHQV 77
                 L      AGD+NA H  +G      +G Q+
Sbjct: 121 MEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQL 156


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKDTQHFKISGYNSH--YHNAQNE 359
           L I+ +N   + R    L++F+ E+N+D+ LL+ET L +  +F I GY  +   H     
Sbjct: 4   LRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTNKNNFHIPGYLFYGTNHPDGKA 63

Query: 358 HGGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRIS--KL 185
           HGG  ILI+   K++ +       +Q+ +++L ++    T+  VYCPP    F IS  + 
Sbjct: 64  HGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCPP---RFPISEDQF 120

Query: 184 RNIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRGHQV 77
                 L      AGD+NA H  +G      +G Q+
Sbjct: 121 MEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQL 156


>M38643-2|AAA28940.1|  192|Drosophila melanogaster protein (
           D.melanogaster mobileelement jockey gag-specific protein
           gene, complete cds.).
          Length = 192

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKDTQHFKISGYNSH--YHNAQNE 359
           L I  +N + + R    L  FL++ ++D+ L  ET ++  Q   + GY  +  +H + N 
Sbjct: 6   LKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRIYLPGYLMYHAHHPSGNS 65

Query: 358 HGGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRISKLRN 179
            GG A++IK    ++ +      D Q   + L  S   +T+  VY PP+   + +   ++
Sbjct: 66  RGGSAVIIKSRLCHSPLTPISTNDRQIARVHLQTSVGTVTVAAVYLPPAE-RWIVDDFKS 124

Query: 178 IIRDLPKPIYVAGDFNAHHVAFGCMTTKSRG 86
           +   L       GD+NA H  +G   +  RG
Sbjct: 125 MFAALGNKFIAGGDYNAKHAWWGNPRSCPRG 155


>M22874-2|AAA28675.1|  916|Drosophila melanogaster protein (
           D.melanogaster LINEelement J-1, clone J-1. ).
          Length = 916

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKDTQHFKISGYNSH--YHNAQNE 359
           L I  +N + + R    L  FL++ ++D+ L  ET ++  Q   + GY  +  +H + N 
Sbjct: 6   LKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRIYLPGYLMYHAHHPSGNS 65

Query: 358 HGGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRISKLRN 179
            GG A++IK    ++ +      D Q   + L  S   +T+  VY PP+   + +   ++
Sbjct: 66  RGGSAVIIKSRLCHSPLTPISTNDRQIARVHLQTSVGTVTVAAVYLPPAE-RWIVDDFKS 124

Query: 178 IIRDLPKPIYVAGDFNAHHVAFGCMTTKSRG 86
           +   L       GD+NA H  +G   +  RG
Sbjct: 125 MFAALGNKFIAGGDYNAKHAWWGNPRSCPRG 155


>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown
           protein.
          Length = 908

 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKDTQHFKISGYNSHYHN---AQN 362
           L I  +N   +  K P +  F+    +D+ LL+ET  K  +  K+ G+ ++  N     N
Sbjct: 4   LRILVWNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGAETPKLFGFVAYTANDPSGGN 63

Query: 361 EHGGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRISKLR 182
             GG AILIK    +  +       +Q     +  +   ++   VYCPP   ++   + +
Sbjct: 64  AKGGAAILIKNSLAHFPLTPIATAKVQLAPAVIETALGPISFGAVYCPP-RFAWTTDEFK 122

Query: 181 NIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRG 86
           +I+ +      VAGD+NA H  +G   +  RG
Sbjct: 123 DILEEFQTKFIVAGDWNASHWLWGAGRSNQRG 154


>AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p
           protein.
          Length = 906

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKDTQHFKISGYNSH--YHNAQNE 359
           L I  +N   I RK   +  F   + VDI L+ E  LK  +  KI GY  +  Y  + N 
Sbjct: 4   LKILIWNANGISRKAKDVELFAHNKKVDILLVTELRLKRGETVKIYGYAYYPAYRPSLNN 63

Query: 358 H--GGVAILIKP---YFKYNIIQTRFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRI 194
           +  GGVA+ ++    +F   +I+TR    IQ  ++ +      L    +YC PS      
Sbjct: 64  NSVGGVAVFVRTTLRHFPQRVIETRH---IQLSSVKVATGLGDLQFSAIYCSPST-RIEE 119

Query: 193 SKLRNIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRGHQV 77
               +IIR   +   V GD+NA H  +G      RG ++
Sbjct: 120 RHFTDIIRACGQRYLVGGDWNARHWLWGDTCNSPRGREL 158


>AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.
          Length = 884

 Score = 55.6 bits (128), Expect = 9e-08
 Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
 Frame = -2

Query: 541 IQQLCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKDTQHFKISGYNSHYHNAQN 362
           I  L I  +N +++  K+  L KFL   ++ I L+NETWL  +  F I  Y + Y N + 
Sbjct: 9   IDNLNIMAWNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRFNIPEY-TIYRNDRK 67

Query: 361 EH--GGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGN-HLTILCVY-------CPPS 212
           E   GGVAI +     +  I       I+ V + +    N  L I  +Y       C PS
Sbjct: 68  ESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSIYFAGNTSKCIPS 127

Query: 211 NG--SFRISKLRNIIR-DLPK------PIYVAGDFNAHHVAFGCMTTKSRG 86
           +   S+  + L+++ R DL K         + GDFN+ H A+ C  T++ G
Sbjct: 128 SCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKC--TRANG 176


>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
           protein.
          Length = 1219

 Score = 49.2 bits (112), Expect = 8e-06
 Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 1/156 (0%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKDTQHFKIS-GYNSHYHNAQNEH 356
           L I Q+N++        L   + + +  I  L ET ++ T +      Y    + A N  
Sbjct: 3   LTIIQWNLKGYLNNYSHLLILIKKYSPHIISLQETHIQYTNNIPTPINYKLLTNIATNRF 62

Query: 355 GGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNHLTILCVYCPPSNGSFRISKLRNI 176
           GGV +L+    ++ ++      DI+ +A+++  S   L I   Y  P+  +     L N 
Sbjct: 63  GGVRLLVHKSIQHTVLNITI--DIEAIAINIE-SKLKLNIFSTYISPTK-NITNQTLHNT 118

Query: 175 IRDLPKPIYVAGDFNAHHVAFGCMTTKSRGHQVIRF 68
                 P  + GDFN  H  +G  TT  RG    RF
Sbjct: 119 FNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRF 154


>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
           protein.
          Length = 1092

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWL-KDTQHFKISGYNSHY--HNAQN 362
           L IA +N   I+ K   L  F+   +  I ++ ET L  ++   ++ GY ++   + A +
Sbjct: 22  LKIAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPASS 81

Query: 361 EHGGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNH----LTILCVYCPPSNGSFRI 194
           + GGVA ++    ++  ++    + IQ+  + L    N     + I  VYCPPS  S+  
Sbjct: 82  KRGGVATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSL-SWSP 140

Query: 193 SKLRNIIRDLPKP------IYVAGDFNAHHVAFGCMTTKSRG 86
               +++    K       + + GD+NA H  +GC+    RG
Sbjct: 141 HHFTDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRG 182


>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
           protein.
          Length = 1080

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKD-TQHFKISGYNSHY--HNAQN 362
           L IA +N   I+ K   L  F+   +  I ++ ET L + +   ++ GY ++   +   +
Sbjct: 10  LKIAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSS 69

Query: 361 EHGGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNH----LTILCVYCPPSNGSFRI 194
           + GGVA ++    ++  ++    + IQ+  + L    N     + I  VYCPPS  S+  
Sbjct: 70  KRGGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSL-SWSP 128

Query: 193 SKLRNIIRDLPKPI------YVAGDFNAHHVAFGCMTTKSRG 86
               +++    K +       + GD+NA H  +GC     RG
Sbjct: 129 HHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 170


>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
           protein.
          Length = 1080

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKD-TQHFKISGYNSHY--HNAQN 362
           L IA +N   I+ K   L  F+   +  I ++ ET L + +   ++ GY ++   +   +
Sbjct: 10  LKIAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSS 69

Query: 361 EHGGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNH----LTILCVYCPPSNGSFRI 194
           + GGVA ++    ++  ++    + IQ+  + L    N     + I  VYCPPS  S+  
Sbjct: 70  KRGGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSL-SWSP 128

Query: 193 SKLRNIIRDLPKPI------YVAGDFNAHHVAFGCMTTKSRG 86
               +++    K +       + GD+NA H  +GC     RG
Sbjct: 129 HHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 170


>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
           protein.
          Length = 1080

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWLKD-TQHFKISGYNSHY--HNAQN 362
           L IA +N   I+ K   L  F+   +  I ++ ET L + +   ++ GY ++   +   +
Sbjct: 10  LKIAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSS 69

Query: 361 EHGGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNH----LTILCVYCPPSNGSFRI 194
           + GGVA ++    ++  ++    + IQ+  + L    N     + I  VYCPPS  S+  
Sbjct: 70  KRGGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSL-SWSP 128

Query: 193 SKLRNIIRDLPKPI------YVAGDFNAHHVAFGCMTTKSRG 86
               +++    K +       + GD+NA H  +GC     RG
Sbjct: 129 HHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 170


>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
          Length = 1227

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWL--KDTQHFKISGYNSHYHNAQ-- 365
           + I Q+NI  I      L+  + +   DI  L ET L    T       Y+ ++HN    
Sbjct: 3   ITILQWNIHGIFNNYNELTLLIKDHAPDIVFLQETKLPCNSTNFICPKEYSGYFHNFSYN 62

Query: 364 -NEHGGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNH---LTILCVYCPPSNGSFR 197
            +   G+ +LIK     N+  T  Y++I +  L   +  N    + I+  Y PPS   F 
Sbjct: 63  TSAKQGIGVLIKR----NVPHT--YRNINSSILCSALQLNFEQVINIVNAYIPPSQ-IFS 115

Query: 196 ISKLRNIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRGHQV 77
            S +  I+++L     + GD N+    +G   T +RG ++
Sbjct: 116 SSDISEILQNLNGSTILLGDLNSWSPLWGSPRTNTRGKKI 155


>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
           transcriptase protein.
          Length = 1084

 Score = 42.7 bits (96), Expect = 7e-04
 Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
 Frame = -2

Query: 532 LCIAQYNIQSIHRKKPLLSKFLAEQNVDICLLNETWL-KDTQHFKISGYNSHY--HNAQN 362
           L IA +N   I+ K   L  F+   +  I ++ ET L  ++   ++ GY ++   +   +
Sbjct: 10  LKIAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPVSS 69

Query: 361 EHGGVAILIKPYFKYNIIQTRFYQDIQTVALSLYVSGNH----LTILCVYCPPSNG--SF 200
           + GGVA ++    ++  ++    + IQ+  + L    N     + I  VYCPPS      
Sbjct: 70  KRGGVATIVNSSIRHMALKPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLRWLPH 129

Query: 199 RISKLRNIIRDL---PKPIYVAGDFNAHHVAFGCMTTKSRG 86
             + + N             + GD+NA H  +GC     RG
Sbjct: 130 HFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRG 170


>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
           protein.
          Length = 1042

 Score = 35.9 bits (79), Expect = 0.075
 Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
 Frame = -2

Query: 442 LLNETWLKD-TQHFKISGYNSHY--HNAQNEHGGVAILIKPYFKYNIIQTRFYQDIQTVA 272
           ++ ET L + +   ++ GY ++   +   ++ GGVA ++    ++  ++    + IQ+  
Sbjct: 2   IVTETRLDNKSTKLELPGYFTYLAQNPVSSKRGGVATIVNSSIRHMALEPIEKECIQSAP 61

Query: 271 LSLYVSGNH----LTILCVYCPPSNGSFRISKLRNIIRDLPKPI------YVAGDFNAHH 122
           + L    N     + I  VYCPPS  S+      +++    K +       + GD+NA H
Sbjct: 62  IVLLPENNRRSEMIVIASVYCPPSL-SWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKH 120

Query: 121 VAFGCMTTKSRG 86
             +GC     RG
Sbjct: 121 RQWGCTRACQRG 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,564,216
Number of Sequences: 53049
Number of extensions: 665632
Number of successful extensions: 1610
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1596
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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