Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_C10
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    32   0.47 
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    32   0.47 
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ...    31   0.82 
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ...    31   0.82 
AF040643-1|AAB94960.1|  998|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z81453-3|CAB03791.1|  480|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AL132948-3|CAC51073.1|  161|Caenorhabditis elegans Hypothetical ...    28   7.6  

>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +2

Query: 683 TTSYALCANIQRDATIPTNSAATWAH*SVSLTTTDKSPSPKSYSPGNSSDCPSVHSSES 859
           T++    ++     T PT++ +T    S ++TT+  +PS  +  P +SS  PS  +S S
Sbjct: 459 TSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSS 517


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +2

Query: 683 TTSYALCANIQRDATIPTNSAATWAH*SVSLTTTDKSPSPKSYSPGNSSDCPSVHSSES 859
           T++    ++     T PT++ +T    S ++TT+  +PS  +  P +SS  PS  +S S
Sbjct: 459 TSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSS 517


>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
           protein C36B7.5b protein.
          Length = 1148

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
 Frame = -1

Query: 342 WVFWRP-----RTCLRGQLERNRLASAERNSDTPFYLWRECSLV*PW-IWSEY 202
           W  W P      TC  G+++RNR+    RN D P      C  + P   WS +
Sbjct: 351 WTLWSPWSLCTATCGVGEIQRNRVCQTGRNCDGPSVEVEACKALLPCPTWSSW 403


>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
           protein C36B7.5a protein.
          Length = 1121

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
 Frame = -1

Query: 342 WVFWRP-----RTCLRGQLERNRLASAERNSDTPFYLWRECSLV*PW-IWSEY 202
           W  W P      TC  G+++RNR+    RN D P      C  + P   WS +
Sbjct: 351 WTLWSPWSLCTATCGVGEIQRNRVCQTGRNCDGPSVEVEACKALLPCPTWSSW 403


>AF040643-1|AAB94960.1|  998|Caenorhabditis elegans Hypothetical
            protein F14D2.6 protein.
          Length = 998

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +3

Query: 414  VIVIHKDLPINNLDQLKGLKSCHTGVNRNVGY-KIPLTMLMKRAVFPKMNDHSISPKENE 590
            ++V+     + NLD L+ L+   +  N      ++    L++   FPK+     SPK N 
Sbjct: 843  LLVVKSTAKLENLDFLENLEQIVSLENSTSPIIQLSSNKLLQNVNFPKIKTPLFSPKNNH 902

Query: 591  LKALVDVLHEILH 629
               +VD   EI++
Sbjct: 903  YIEIVDNKQEIIY 915


>Z81453-3|CAB03791.1|  480|Caenorhabditis elegans Hypothetical
           protein B0250.4 protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 655 KTNSAWKXQYNKLCSMCE 708
           KTN+ W   YNK CS  E
Sbjct: 173 KTNTVWNKNYNKFCSFKE 190


>AL132948-3|CAC51073.1|  161|Caenorhabditis elegans Hypothetical
           protein Y39B6A.4 protein.
          Length = 161

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 776 TTTDKSPSPKSYSPGNSSDCPSVHSSESFKR 868
           +TT  SPS KS +  +SS   S  SSES  R
Sbjct: 4   STTSTSPSKKSITVTSSSSSSSTSSSESMPR 34


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,901,448
Number of Sequences: 27780
Number of extensions: 477660
Number of successful extensions: 1357
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)