Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_C07
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 35 0.065
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 34 0.15
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 33 0.26
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.61
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.61
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 32 0.61
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 32 0.61
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.80
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 0.80
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 0.80
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 0.80
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.1
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.1
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.1
L23648-9|AAK95877.1| 466|Caenorhabditis elegans Prion-like-(q/n... 30 1.9
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 30 1.9
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.4
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 30 2.4
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 30 2.4
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.2
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 29 3.2
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 29 3.2
Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical p... 29 4.3
Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical p... 29 4.3
Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical p... 29 4.3
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.3
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.3
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 4.3
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 4.3
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 29 4.3
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 4.3
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 5.7
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 29 5.7
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 5.7
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 28 7.5
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 28 7.5
U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical pr... 28 7.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 7.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 7.5
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 28 7.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 7.5
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 7.5
AC087081-12|AAK66039.2| 324|Caenorhabditis elegans Hypothetical... 28 7.5
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 28 9.9
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 28 9.9
AF098992-8|AAC67454.2| 239|Caenorhabditis elegans Hypothetical ... 28 9.9
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 28 9.9
AC087081-11|AAK66034.2| 328|Caenorhabditis elegans Hypothetical... 28 9.9
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 28 9.9
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 28 9.9
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 9.9
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 28 9.9
AC006729-6|AAF60464.1| 282|Caenorhabditis elegans Hypothetical ... 28 9.9
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 35.1 bits (77), Expect = 0.065
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 707 LPSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXP 847
+P+ P P+ V P + PPP P P PPP P P P
Sbjct: 107 VPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +2
Query: 722 PGRLPHTSPL-----VXISXPGGRXLPPPXXPXXAPNPPPXXPXPXP 847
P R+P+ SP V S P LPP P P PPP P P P
Sbjct: 477 PSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +2
Query: 722 PGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXP 847
P P T + P PP P AP PP P P P
Sbjct: 444 PPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSP 485
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 770 GGRXLPPPXXPXXAPNPPPXXPXPXPLYP 856
G LPPP P P PPP P P P P
Sbjct: 238 GCSCLPPPPSPVCMPPPPPPCPMPIPCPP 266
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 788 PPXXPXXAPNPPPXXPXPXPLYPGY 862
PP P AP PPP P P P Y Y
Sbjct: 39 PPCPPQYAPLPPPPMPAPAPAYNPY 63
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 31.9 bits (69), Expect = 0.61
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +2
Query: 710 PSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPL 850
P+ P P SP S PPP P PPP P P PL
Sbjct: 86 PAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPL 132
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +2
Query: 710 PSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPLYP 856
P G PG +P P PG +PPP P P P P P YP
Sbjct: 310 PPGMPG-MPPPPPPSRFGPPGMGGMPPPPPPGMR-YPGGMPPPPPPRYP 356
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 713 SGXPGRLPHTSPLVXISXPG--GRXLP-PPXXPXXAPNPPPXXPXP 841
+G PG P PL+ ++ G G+ P PP P P PPP P P
Sbjct: 238 TGRPGYQP--PPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTP 281
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +2
Query: 704 FLPSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPLYP 856
F P G G P P + PGG +PPP P P P P P P
Sbjct: 325 FGPPGMGGMPPPPPP--GMRYPGG--MPPPPPPRYPSAGPGMYPPPPPSRP 371
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +2
Query: 710 PSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPLYP 856
P G PG +P P PG +PPP P P P P P YP
Sbjct: 320 PPGMPG-MPPPPPPSRFGPPGMGGMPPPPPPGMR-YPGGMPPPPPPRYP 366
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 713 SGXPGRLPHTSPLVXISXPG--GRXLP-PPXXPXXAPNPPPXXPXP 841
+G PG P PL+ ++ G G+ P PP P P PPP P P
Sbjct: 248 TGRPGYQP--PPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTP 291
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +2
Query: 704 FLPSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPLYP 856
F P G G P P + PGG +PPP P P P P P P
Sbjct: 335 FGPPGMGGMPPPPPP--GMRYPGG--MPPPPPPRYPSAGPGMYPPPPPSRP 381
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.61
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 734 PHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPLYP 856
P P + +S P + PPP P PPP P P P
Sbjct: 74 PLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 114
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 695 SRPFLPSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPLY 853
S P P P P P P PPP P PP P PLY
Sbjct: 72 SPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLY 124
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 31.9 bits (69), Expect = 0.61
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 734 PHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPLYP 856
P P + +S P + PPP P PPP P P P
Sbjct: 296 PLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 336
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 695 SRPFLPSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPLY 853
S P P P P P P PPP P PP P PLY
Sbjct: 294 SPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLY 346
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.80
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 710 PSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPLYPGY 862
P P LP P I P PP P P PPP P P P P Y
Sbjct: 36 PMCAPPPLPCPPP--PICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSY 84
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 707 LPSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXP 847
+P P P + ++ G PPP P A PPP P P P
Sbjct: 211 IPQAPPAPPPPIGGIAPVNAHGAPP-PPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 707 LPSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXP 847
+P P P + ++ G PPP P A PPP P P P
Sbjct: 197 IPQAPPAPPPPIGGIAPVNAHGAPP-PPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 707 LPSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXP 847
+P P P + ++ G PPP P A PPP P P P
Sbjct: 197 IPQAPPAPPPPIGGIAPVNAHGAPP-PPPLPPVGAGAPPPPPPPPPP 242
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 710 PSGXPGRLPHTSPLVXISXPGGRXLP-PPXXPXXAPNPPPXXPXP 841
PSG P +P +P + PGGR P PP AP PP P P
Sbjct: 760 PSG-PSPVPRPAP----APPGGRQAPMPPRGGPGAPPPPGMRPPP 799
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 710 PSGXPGRLPHTSPLVXISXPGGRXLP-PPXXPXXAPNPPPXXPXP 841
PSG P +P +P + PGGR P PP AP PP P P
Sbjct: 760 PSG-PSPVPRPAP----APPGGRQAPMPPRGGPGAPPPPGMRPPP 799
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Frame = +2
Query: 710 PSGX--PGR-LPHTSPLVXISXPGGRXLPPPXXPXXAPNPPP----XXPXPXPLYPG 859
PSG PG+ +P S + P G +PPP P P PPP P P P+ G
Sbjct: 48 PSGILPPGQSIPKPSFFIPPPVPNG-FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = +2
Query: 767 PGGRXLPPPXXPXXAPNPPP---XXPXPXPLY 853
PGG PPP P PPP P P P++
Sbjct: 80 PGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 710 PSGXPGRLPHTSPLVXISXPGGRXLP-PPXXPXXAPNPPPXXPXP 841
PSG P +P +P + PGGR P PP AP PP P P
Sbjct: 760 PSG-PSPVPRPAP----APPGGRQAPMPPRGGPGAPPPPGMRPPP 799
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 710 PSGXPGRLPHTSPLVXISXPGGRXLP-PPXXPXXAPNPPPXXPXP 841
PSG P +P +P + PGGR P PP AP PP P P
Sbjct: 760 PSG-PSPVPRPAP----APPGGRQAPMPPRGGPGAPPPPGMRPPP 799
>L23648-9|AAK95877.1| 466|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 38
protein.
Length = 466
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 788 PPXXPXXAPNPPPXXPXPXPLYPGY 862
PP P PN PP P P P YP Y
Sbjct: 6 PPNYPPGNPNQPPPFP-PTPYYPMY 29
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 710 PSGXPGRLPHTSPLVXISXPG--GRXLPPPXXPXXAPNPPPXXPXPXPLYPG 859
P+G PGR + PG G+ + P P A P P P P +PG
Sbjct: 245 PAGSPGRSGQPGSNGNVGAPGAPGQVVDVPGAPGPAGPPGPPGPSGAPGHPG 296
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Frame = +2
Query: 767 PGGRXLPPPXXP-----XXAPNPPPXXPXPXPLYPG 859
PGG PPP P AP PP P P +PG
Sbjct: 440 PGGSGAPPPGPPGAYPGNGAPGGPPGGPPQFPGHPG 475
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = +2
Query: 713 SGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPP---XXPXPXPLYPGY 862
S P P +P + P P P P P PP P P P YPGY
Sbjct: 686 SSTPSDTP--APSTSVPPPTSVQPPQPQQPPQGPPGPPGPQQHPGPYPGYPGY 736
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 701 PFLPSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPL 850
P + + G P SP +PPP P AP PPP P P+
Sbjct: 291 PQISTSSNGASPSVSPASTSPSGPAPSIPPPRPPALAP-PPPVAPRRNPV 339
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 701 PFLPSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPL 850
P + + G P SP +PPP P AP PPP P P+
Sbjct: 291 PQISTSSNGASPSVSPASTSPSGPAPSIPPPRPPALAP-PPPVAPRRNPV 339
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 743 SPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXP 841
+PL + GG+ PPP PPP P P
Sbjct: 15 APLAALIGCGGKKKPPPPKSASKMGPPPPAPAP 47
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 734 PHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXP 841
P P S GG PPP P PPP P P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPP 157
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 710 PSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXP 847
P+G P +P P+ ++ P PPP P P PPP P P
Sbjct: 691 PAGLPPGVP---PMFNLNAP-----PPPGIPGYPPAPPPPGVGPPP 728
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 743 SPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXP 841
+PL + GG+ PPP PPP P P
Sbjct: 15 APLAVLIGCGGKKKPPPPKSASKMGPPPPAPAP 47
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 746 PLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPLYPG 859
PL + PG + PP P P P P PL PG
Sbjct: 212 PLTPLPSPGAQSTAPPVFPTSTPTP---TSTPTPLLPG 246
>Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical
protein C36B1.12c protein.
Length = 662
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 529 KRQQRGLXTVPGLLLAFCSHVLSCV-IPLILWITVL 425
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical
protein C36B1.12b protein.
Length = 640
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 529 KRQQRGLXTVPGLLLAFCSHVLSCV-IPLILWITVL 425
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical
protein C36B1.12a protein.
Length = 652
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 529 KRQQRGLXTVPGLLLAFCSHVLSCV-IPLILWITVL 425
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 855 G*RGQGXGXXGGGXGAXQGXXGGG 784
G RG G G GGG G G GGG
Sbjct: 102 GGRGGGGGGRGGGGGGGGGRGGGG 125
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 6/59 (10%)
Frame = +2
Query: 698 RPFLPSGXPGRLPHTSPLVXISXP-GGRXLPPPXX-----PXXAPNPPPXXPXPXPLYP 856
+P +P P +P P+ P + PPP P P PPP P P P P
Sbjct: 36 QPRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCP 94
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 846 GQGXGXXGGGXGAXQGXXGGGRXLPPG 766
G G G GGG G +G GGG P G
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTG 641
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 846 GQGXGXXGGGXGAXQGXXGGGR 781
G+G G GGG G G GGGR
Sbjct: 253 GRGYGGGGGGGGYGYGGGGGGR 274
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 846 GQGXGXXGGGXGAXQGXXGGGRXLP 772
G G G GGG G G GGG LP
Sbjct: 22 GGGGGGCGGGCGGGCGGGGGGGCLP 46
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 846 GQGXGXXGGGXGAXQGXXGGGRXLPPG 766
G G G GGG G +G GGG P G
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTG 641
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 782 LPPPXXPXXAPNPPPXXPXPXP 847
+PPP P PPP P P P
Sbjct: 776 IPPPFFALPVPPPPPVPPPPPP 797
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 787 PPXXALXXPXPPPXXPXPLXP 849
PP AL P PPP P P P
Sbjct: 778 PPFFALPVPPPPPVPPPPPPP 798
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 846 GQGXGXXGGGXGAXQGXXGGGRXLPPGXEI 757
G G G GGG GA + GGG PPG +
Sbjct: 22 GVGGGPAGGGGGASK--VGGGAAPPPGTSV 49
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 707 LPSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXP-XPXPL 850
LPS P + +P P R P P P PPP P P PL
Sbjct: 535 LPSPEPSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPPAKPRPL 583
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 767 PGGRXLPPPXXPXXAPNPPPXXPXP 841
P R LPPP P P PPP P P
Sbjct: 236 PTTRRLPPPTTP--PPPPPPPAPSP 258
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 767 PGGRXLPPPXXPXXAPNPPPXXPXP 841
P R LPPP P P PPP P P
Sbjct: 234 PTTRRLPPPTTP--PPPPPPPAPSP 256
>U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical
protein F08B4.7 protein.
Length = 142
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +2
Query: 710 PSGXPGRLPHTSPLVXISXPGGRXLPP-PXXPXXAPNPPPXXP-XPXP 847
P G P P P + PG +PP P P PP P P P
Sbjct: 88 PPGMPMMAPRPFPGPGVGFPGAPGMPPFPGGPMGMAGPPGMPPMMPRP 135
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +2
Query: 710 PSGXP---GRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXP 835
P G P G P P + G PPP P P PPP P
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +2
Query: 710 PSGXP---GRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXP 835
P G P G P P + G PPP P P PPP P
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +2
Query: 710 PSGXPGRL--PHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXP 847
P+G PG P + + IS PG + P P PP P P P
Sbjct: 233 PNGTPGLKGEPGNNSIRQISLPGRKGPPGLPGQCGPPGPPGYTPPPGP 280
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +2
Query: 710 PSGXP---GRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXP 835
P G P G P P + G PPP P P PPP P
Sbjct: 315 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 848 GXRGXGXKGGGXGXXRAXXGGEGPYHPGXRY 756
G G G GGG G GG+G Y P Y
Sbjct: 199 GMGGGGYGGGGMGGGGYGGGGDGGYGPSGGY 229
>AC087081-12|AAK66039.2| 324|Caenorhabditis elegans Hypothetical
protein Y82E9BL.17 protein.
Length = 324
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 534 WKNASNAAFXRFLAFCWPFAHMF 466
WKN N F + C PF H+F
Sbjct: 212 WKNTKNFCFDNYELECPPFEHLF 234
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 791 PXXPXXAPNPPPXXPXPXPLYP 856
P P P PPP P P P+ P
Sbjct: 512 PPLPPLPPPPPPPKPKPAPVQP 533
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 791 PXXPXXAPNPPPXXPXPXPLYP 856
P P P PPP P P P+ P
Sbjct: 512 PPLPPLPPPPPPPKPKPAPVQP 533
>AF098992-8|AAC67454.2| 239|Caenorhabditis elegans Hypothetical
protein F53C3.3 protein.
Length = 239
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 842 RGXGXKGGGXGXXRAXXGGEG 780
RG G +GGG G R GG G
Sbjct: 22 RGGGGRGGGGGGARGGVGGRG 42
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 710 PSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXP 841
P+G PGR P + G PP P PPP P P
Sbjct: 98 PTGEPGR-PGRPGKPGVPGMPGNPGKPPQQPCELVTPPPCSPCP 140
>AC087081-11|AAK66034.2| 328|Caenorhabditis elegans Hypothetical
protein Y82E9BL.7 protein.
Length = 328
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 534 WKNASNAAFXRFLAFCWPFAHMF 466
WKN N F + C PF H+F
Sbjct: 220 WKNTKNFRFDNYELECPPFEHLF 242
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 713 SGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPLYP 856
+G PG P P ++ PP P AP PPP P P L P
Sbjct: 758 AGAPGS-PRLPPKPSVAQTIAMHSAPPS-PLTAPIPPPPPPPPPMLPP 803
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 713 SGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXPXPLYP 856
+G PG P P ++ PP P AP PPP P P L P
Sbjct: 657 AGAPGS-PRLPPKPSVAQTIAMHSAPPS-PLTAPIPPPPPPPPPMLPP 702
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 846 GQGXGXXGGGXGAXQGXXGGGRXLPP 769
G G G GGG G+ G GR PP
Sbjct: 189 GGGGGGMGGGGGSGGSGGGSGRFPPP 214
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 710 PSGXPGRLPHTSPLVXISXPGGRXLPPPXXPXXAPNPPPXXPXP 841
P G PGR P + + G PP P PPP P P
Sbjct: 179 PPGPPGR-PGPNGKAGANGLNGNPGRPPEAPCEPVTPPPCPPCP 221
>AC006729-6|AAF60464.1| 282|Caenorhabditis elegans Hypothetical
protein Y24D9A.5 protein.
Length = 282
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 420 GGNTVIHRIRGITQERTCEQKASKRPG 500
GG +V +R + Q+++ ++SKRPG
Sbjct: 167 GGKSVFYRFTNLIQKKSFSVRSSKRPG 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,965,857
Number of Sequences: 27780
Number of extensions: 360624
Number of successful extensions: 2675
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2130
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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