Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_C06
(876 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 41 2e-04
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 36 0.010
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 35 0.011
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.013
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.013
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.013
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.017
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 34 0.023
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.093
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.22
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 1.1
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 28 1.5
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 2.0
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 3.5
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 4.6
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 6.1
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 8.1
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/54 (38%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Frame = +1
Query: 664 PPPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXP-----XPPXPPXXPPS 810
PPPPPP P P PPP PPP P PP PP PP+
Sbjct: 732 PPPPPPAVIVP-TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +2
Query: 392 PXXFXPPTXVXFSPPXXKG--GLFXXXPPPPPPXPP 493
P PP + PP G+ PPPPPP PP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Frame = +2
Query: 470 PPPPPX---PPPXXPPXXXPXXXXPPXPXXXXXXXXGG 574
PPP P PPP PP PP P GG
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 667 PPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPP 795
PPPPPP PP PPP S P P P
Sbjct: 761 PPPPPP--PPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 6/37 (16%)
Frame = +2
Query: 452 LFXXXPPPPP------PXPPPXXPPXXXPXXXXPPXP 544
L PPPPP P P P P P PP P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP 764
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Frame = +2
Query: 716 SXXPPPPXXLXXPPPPRXXXPXPPXP----PXPP 805
S PPPP + P P PP P P PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP 764
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 428 SPPXXKGGLFXXXPPPPPPXPPPXXPPXXXPXXXXPP 538
SPP + P P P PP P P PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Frame = +2
Query: 392 PXXFXPPTXVXFSPPXXKGGLFXXXPPPPPPXP------PPXXPP 508
P PT P PPPPPP P PP PP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 35.5 bits (78), Expect = 0.010
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = -2
Query: 806 GGXXGGXGGXGXXXGG--GXXXKXXXGGGXXXXXXXGGXGGXXGGGGG 669
GG GG GG G GG G GG GG GG GG GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 32.7 bits (71), Expect = 0.071
Identities = 20/48 (41%), Positives = 21/48 (43%)
Frame = -2
Query: 806 GGXXGGXGGXGXXXGGGXXXKXXXGGGXXXXXXXGGXGGXXGGGGGGG 663
GG G GG G GG + GGG GG GG GG GG G
Sbjct: 9 GGRGGSRGGRGGFNGG----RGGFGGG-RGGARGGGRGGARGGRGGRG 51
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -2
Query: 806 GGXXGGXGGXGXXXGGGXXXKXXXGGGXXXXXXXGGXGGXXGGGGG 669
GG G GG G GG + GG GG GG GG GG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGAR--GGGRGGARGGRGGRGGARGGRGG 59
Score = 29.9 bits (64), Expect = 0.50
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -2
Query: 806 GGXXGGXGGXGXXXGG-GXXXKXXXGGGXXXXXXXGGXGGXXGGGGGG 666
GG GG GG GG G GGG G G GG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 29.1 bits (62), Expect = 0.87
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -1
Query: 537 GGXXXXGXXXGGXXGGGXGGGGGGXXXKXPPFXXGGENXTXVGGXK 400
GG G GG GGG GG GG + G + GG K
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 794 GGXGGXGXXXGGGXXXKXXXGGGXXXXXXXGGXGGXXGGGGGG 666
G GG G GG GG GG GG GGG GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGG------FGGGRGGARGGGRGG 42
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 543 GXGGXXXXGXXXGGXXGGGXGGGGGG 466
G GG GG GG GGG GG
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGG 42
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 35.1 bits (77), Expect = 0.013
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +1
Query: 664 PPPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
PPPPPPP PP P P + P PP P PP
Sbjct: 238 PPPPPPPTLPPQSTNTSQL--PMPSRNVNNLGSQVNIPPPPATPSQPP 283
Score = 27.9 bits (59), Expect(2) = 0.011
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 470 PPPPPXPPPXXPP 508
P PPP PPP PP
Sbjct: 236 PAPPPPPPPTLPP 248
Score = 27.5 bits (58), Expect = 2.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 664 PPPPPPPXXPPXPP 705
PPPP P PP PP
Sbjct: 273 PPPPATPSQPPRPP 286
Score = 26.2 bits (55), Expect(2) = 0.011
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 467 PPPPPPXPP 493
PPPPPP PP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect(2) = 0.92
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 470 PPPPPXPPP 496
PPPPP PPP
Sbjct: 189 PPPPPPPPP 197
Score = 21.0 bits (42), Expect(2) = 0.92
Identities = 8/22 (36%), Positives = 8/22 (36%)
Frame = +2
Query: 479 PPXPPPXXPPXXXPXXXXPPXP 544
P PP P P PP P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPP 242
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.1 bits (77), Expect = 0.013
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 667 PPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
P PP P PP S PPP P P PP PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 33.5 bits (73), Expect = 0.040
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +1
Query: 664 PPPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPP 795
P PPPPP P PP P P S PPP P P
Sbjct: 1705 PTPPPPPMSVPPPP----SAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 31.9 bits (69), Expect = 0.12
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 676 PPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPPS 810
PP P PP PPP PP P PP P PS
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP-PPLPASSAPS 1742
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +2
Query: 725 PPPPXXLXXPPPPRXXXP-XPPXPPXPP 805
PPPP PPP P PP P PP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.1 bits (62), Expect = 0.87
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +2
Query: 392 PXXFXPPTXVXFSPPXXKGGLFXXXPPPPPPXPPPXXPPXXXPXXXXPPXP 544
P PP +PP + PP P PP PP P P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/40 (32%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
Frame = +1
Query: 667 PPPPP---PXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXP 777
PPPPP P P PP PP + P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.1 bits (77), Expect = 0.013
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -2
Query: 806 GGXXGGXGGXGXXXGGGXXXKXXXGGG-XXXXXXXGGXGGXXGGGGGG 666
G GG GG G GG GGG GG GG GG GGG
Sbjct: 217 GHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 6/53 (11%)
Frame = -2
Query: 803 GXXGGXGGXGXXXGG----GXXXKXXXGGGXXXXXXXGGXGGXXGG--GGGGG 663
G GG GG G GG G GG GG GG GG GG GG
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGG 260
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -2
Query: 806 GGXXGGXGGXGXXXGGGXXXKXXXGGGXXXXXXXGGXGGXXGGGGGG 666
G GG GG G GG GG G G GG GGG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGG-FGGFGGEGHHHGGHGGFGGG 229
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 537 GGXXXXGXXXGGXXGGGXGGGGGG 466
GG G GG GGG GG GGG
Sbjct: 242 GGPGGFGGGLGGF-GGGPGGFGGG 264
Score = 25.8 bits (54), Expect = 8.1
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
Frame = -1
Query: 576 PPPXXXXXXXXGXGGXXXXGXXXGGXXG--GGXGG--GGGGXXXKXPPFXXGGENXTXVG 409
PPP G GG G GG G GG GG GG G P GG G
Sbjct: 200 PPPGPGGFG--GFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Query: 408 GXKXXGXP 385
G P
Sbjct: 258 PGGFGGGP 265
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.013
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +1
Query: 670 PPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXP 792
PP PP P PP PP + PPP P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 34.7 bits (76), Expect = 0.017
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +1
Query: 664 PPPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
PP P PP PP P PP + P P PP P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGA----PAAPPLPPSAPIAPP 458
Score = 32.3 bits (70), Expect = 0.093
Identities = 28/127 (22%), Positives = 28/127 (22%), Gaps = 2/127 (1%)
Frame = +2
Query: 431 PPXXKGGLFXXXPPPPPP--XPPPXXPPXXXPXXXXPPXPXXXXXXXXGGGXXXXXXXXX 604
PP G PPPPPP P PP P G
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRA 384
Query: 605 XXXXXXPPPHXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXPPPPXXLXXPPPPRXXXPXP 784
PPP S P P L PP P
Sbjct: 385 VSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Query: 785 PXPPXPP 805
PP PP
Sbjct: 445 AAPPLPP 451
Score = 32.3 bits (70), Expect = 0.093
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +1
Query: 667 PPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXP-XPPXPPXXP 804
PP PP PP P P P P P P PP PP P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 679 PPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPPS 810
PP PP P PP PP P P PP PPS
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP-PSLPPSAPPS 430
Score = 29.9 bits (64), Expect = 0.50
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 12/61 (19%)
Frame = +1
Query: 664 PPPPPPP-----XXPPXPPXXXXXXXPPPXXXXS-------XXPPPXXXPXPPXPPXXPP 807
PPPPPPP PP PPP PP PP PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 808 S 810
S
Sbjct: 371 S 371
Score = 29.9 bits (64), Expect = 0.50
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 6/55 (10%)
Frame = +1
Query: 664 PPPPPP------PXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPPS 810
PP PP P PP PP P P + P P P PP P P+
Sbjct: 432 PPSAPPSLPMGAPAAPPLPP-SAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPA 485
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 667 PPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
PPPPPP P P P S PPP P PP
Sbjct: 337 PPPPPP-----PRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +2
Query: 407 PPTXVXFSPPXXKGGLFXXXPPPPPPXPPPXXPPXXXPXXXXPPXP 544
PP+ PP L P PPP PPP P PP P
Sbjct: 233 PPSIPSSRPPERVPSL---SAPAPPPIPPPSNGTVSSP-PNSPPRP 274
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +2
Query: 407 PPTXVXFSPPXXKGGLFXXXPPPPP-PXPPPXXPPXXXPXXXXPPXP 544
PP+ PP L P PP P P PP PP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.017
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 664 PPPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
P P P PP PP P P PPP P P P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Score = 34.3 bits (75), Expect = 0.023
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +1
Query: 664 PPPPPPPXXPPXP-PXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
PP PPP PP P P PPP P P P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 33.5 bits (73), Expect = 0.040
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 664 PPPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPPS 810
PP P P PP P PP S PP P PP PPS
Sbjct: 1150 PPVPAPSGAPPVPKPSVAA---PPVPAPSSGIPPVPKPAAGVPPVPPPS 1195
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +1
Query: 664 PPPPPPPXXPPXP-PXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
PP P P PP P P P P P P P P P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAP 1131
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +1
Query: 664 PPPPPPPXXPPXP-PXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
P P P PP P P PPP P P P P PP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 30.7 bits (66), Expect = 0.28
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +1
Query: 664 PPPPPPPXXPPXP-PXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
PP P P PP P P P P P P P P PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 30.3 bits (65), Expect = 0.38
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 7/56 (12%)
Frame = +1
Query: 664 PPPPPPP-XXPPXP-PXXXXXXXPPPXXXXSXXPPPXXXPXPP-----XPPXXPPS 810
PP P P PP P P P P PPP P P PP PPS
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Score = 29.9 bits (64), Expect = 0.50
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 664 PPPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPPS 810
P P P PP PP PP S PP P PP PS
Sbjct: 1199 PVPKPSVGVPPVPP----PSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 29.5 bits (63), Expect = 0.66
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 664 PPPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPPS 810
PP P P PP P P PPP P P PS
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 29.1 bits (62), Expect = 0.87
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 6/55 (10%)
Frame = +1
Query: 664 PPPPPPPXXPPXP------PXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPPS 810
PP P P PP P P PP S PP P PP P+
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Frame = +1
Query: 664 PPPPPPPXXPPXP-PXXXXXXXPPPXXXXS----XXPPPXXXPXPPXPPXXPP 807
PP P P PP P PPP S P P P P P PP
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Frame = +1
Query: 664 PPPPPPPXXPPXPPXXXXXXXP----PPXXXXSXXPPPXXXPXPPXPPXXPPS 810
PP PP P P P PP S PP P PP PS
Sbjct: 986 PPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPS 1038
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 664 PPPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
P P P PP P P P P P P P P P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 664 PPPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
P P P PP P P P P P P P P P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +2
Query: 407 PPTXVXFS-PPXXKGGLFXXXPPPPPPXPPPXXPPXXXPXXXXPPXP 544
PP + S PP K PPP P P P P PP P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP-SGAPPVP 1086
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/49 (30%), Positives = 15/49 (30%), Gaps = 1/49 (2%)
Frame = +1
Query: 664 PPPPPPPXXPPXPPXXXXXXXPPPXXXXSXXP-PPXXXPXPPXPPXXPP 807
P P P PP P P P P P P P P PP
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +2
Query: 407 PPTXVXFSPPXXKGGLFXXXPP---PPPPXPPPXXPPXXXPXXXXPPXP 544
PP P G+ PP PP P P PP P PP P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 27.1 bits (57), Expect = 3.5
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 6/57 (10%)
Frame = +2
Query: 392 PXXFXPPTXVXF-SPPXXKGGLFXXXPP-----PPPPXPPPXXPPXXXPXXXXPPXP 544
P PP V +PP K + P PP P P PP P PP P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Frame = +1
Query: 670 PPPPPXXPPXPPXXXXXXXPPPXXXXSXXPP-PXXXPXPPXP 792
PP P PP PP S PP P PP P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVP 1053
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Frame = +1
Query: 664 PPPPPPP-XXPPXP-PXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
PP P P PP P P P P P P P P PP
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 476 PPPXPPPXXPPXXXPXXXXPPXP 544
PP PP PP P PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVP 1211
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 7/56 (12%)
Frame = +1
Query: 664 PPPPPPPX--XPPXPPXXXXXXXP-----PPXXXXSXXPPPXXXPXPPXPPXXPPS 810
PPP P P P P P PP S PP P PP PS
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPS 1118
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 473 PPPPXPPPXXPPXXXPXXXXPPXP 544
PP P P PP P PP P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP 1192
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 673 PPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPPS 810
PP P PP PP S PP P PP PS
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP-SGAPPVPKPS 1127
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 473 PPPPXPPPXXPPXXXPXXXXPPXP 544
PP P P PP P PP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 25.8 bits (54), Expect = 8.1
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 6/57 (10%)
Frame = +2
Query: 392 PXXFXPPTXVXFS--PPXXKGGLFXXXPPPPPPXPPPXXP----PXXXPXXXXPPXP 544
P PP S PP K PPP PP P P P PP P
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 667 PPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
PP PPP P P PP + PP P P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGL--PPVPVPTAKAPPVPAPSSEAPSVSTP 1252
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 34.3 bits (75), Expect = 0.023
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -2
Query: 824 KKKKXXGGXXGGXGGXGXXXGGGXXXKXXXGGGXXXXXXXGGXGGXXGGGGGG 666
KK K G GG G GG + GG G GG GG GG
Sbjct: 125 KKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 33.9 bits (74), Expect = 0.031
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -2
Query: 806 GGXXGGXGGXGXXXGG-GXXXKXXXGGGXXXXXXXGGXGGXXGGGGGG 666
GG G GG G GG G + GGG G GG GG GG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.3 bits (70), Expect = 0.093
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 725 PPPPXXLXXPPPPRXXXPXPPXPPXPP 805
PPPP PPPP P P PP PP
Sbjct: 9 PPPP-----PPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.22
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +2
Query: 467 PP--PPPPXPPPXXPPXXXPXXXXPP 538
PP PPPP PPP P P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 470 PPPPPXPPPXXPPXXXPXXXXPPXP 544
PP P PPP P P PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 731 PPXXLXXPPPPRXXXPXPPXPPXPP 805
PP PPPP P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Frame = +1
Query: 664 PP--PPPPPXXPPXPPXXXXXXXPPP 735
PP PPPPP P P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 7/54 (12%)
Frame = +1
Query: 667 PPPPPPXXPPXPPXXXXXXX--PPPXXXXSXXPPPXXXPX-----PPXPPXXPP 807
PPP P PP P PPP + P P PP PP PP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +1
Query: 679 PPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
PP P P P PPP PP P PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP 166
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 673 PPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPPS 810
PP P PP P S PPP P P PS
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/50 (30%), Positives = 15/50 (30%), Gaps = 2/50 (4%)
Frame = +1
Query: 664 PPPPPP--PXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXPPXXPP 807
PPP P P P P PP PP P P PP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Frame = +1
Query: 667 PPPPPPXXPPXPPXXXXXXX--PPPXXXXSXXPPPXXXPXPPXPPXXPP 807
P PP P PP PPP + PP PP P PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASA---PPIPSKAPPIPSSLPP 173
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 1/41 (2%)
Frame = +1
Query: 667 PPPPPPXXPPXPPXXXXXXXPPPXXXXSXXPP-PXXXPXPP 786
PP P PP P P S PP P P PP
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 467 PPPPPPXPPP 496
PPPPPP P P
Sbjct: 5 PPPPPPAPAP 14
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 467 PPPPPPXPPPXXPPXXXPXXXXPP 538
PPPPP P PP P PP
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPP 1906
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/44 (31%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Frame = +1
Query: 664 PPPPPPPXXP-PXPPXXXXXXXPPPXXXXSXXPPPXXXPXPPXP 792
PPPPPP P PP PP + P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAP 1925
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 670 PPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPP 786
PPPPP PP PP PP P PP
Sbjct: 206 PPPPPPQQNYPP--AASSSAPPMQYQQTAYPPQQAPYPP 242
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.9 bits (59), Expect = 2.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 449 GLFXXXPPPPPPXPP 493
G+ PPPPPP PP
Sbjct: 939 GVMPAFPPPPPPPPP 953
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 470 PPPPPXPPP 496
PPPPP PPP
Sbjct: 945 PPPPPPPPP 953
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 670 PPPPPXXPPXPPXXXXXXXPPPXXXXSXXPPPXXXPXPP 786
P P P PP P P S PP P PP
Sbjct: 42 PAPVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPP 80
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 804 GGXGGXGGXGXXXRGGGGXXXXXGG 730
GG GG GG G GGG GG
Sbjct: 454 GGFGGRGGFGGRGGFGGGRGRGRGG 478
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 467 PPPPPPXPP 493
PPPPPP PP
Sbjct: 306 PPPPPPPPP 314
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 470 PPPPPXPPP 496
PPPPP PPP
Sbjct: 306 PPPPPPPPP 314
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 467 PPPPPPXPPP 496
PPPPPP P P
Sbjct: 356 PPPPPPMPAP 365
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,111,055
Number of Sequences: 5004
Number of extensions: 34339
Number of successful extensions: 784
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 383
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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