Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_C04
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071724-1|AAL49346.1|  121|Drosophila melanogaster RH40291p pro...    32   1.2  
AE014297-3068|AAF55934.1|  121|Drosophila melanogaster CG17820-P...    32   1.2  
BT029915-1|ABM92789.1|  520|Drosophila melanogaster FI01025p pro...    31   2.8  
BT003469-1|AAO39472.1|  523|Drosophila melanogaster RE70568p pro...    31   2.8  
AE014134-3038|AAF53756.1|  440|Drosophila melanogaster CG10699-P...    31   2.8  
AE014134-3037|AAF53758.2|  520|Drosophila melanogaster CG10699-P...    31   2.8  
AF109306-1|AAD02889.1|  440|Drosophila melanogaster LIM homeodom...    30   4.9  
AF219383-1|AAF23183.1| 1023|Drosophila melanogaster tiptop prote...    29   6.5  
AE014134-3557|AAF57242.3| 1024|Drosophila melanogaster CG12630-P...    29   6.5  

>AY071724-1|AAL49346.1|  121|Drosophila melanogaster RH40291p
           protein.
          Length = 121

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +2

Query: 83  MNSKLLYFFATVLVCVNAE-VYWEDEEGYPVSGQFSKRHPRDVTWDKQVG 229
           MNS L+    + L  V A  + W +E+        S  HP  V W   VG
Sbjct: 1   MNSTLVILLLSALALVQARNIRWSEEDNSSQGPSLSHPHPHSVNWPCDVG 50


>AE014297-3068|AAF55934.1|  121|Drosophila melanogaster CG17820-PA
           protein.
          Length = 121

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +2

Query: 83  MNSKLLYFFATVLVCVNAE-VYWEDEEGYPVSGQFSKRHPRDVTWDKQVG 229
           MNS L+    + L  V A  + W +E+        S  HP  V W   VG
Sbjct: 1   MNSTLVILLLSALALVQARNIRWSEEDNSSQGPSLSHPHPHSVNWPCDVG 50


>BT029915-1|ABM92789.1|  520|Drosophila melanogaster FI01025p
           protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 330 PGRPTAPGSWDPQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 464
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 459 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 503


>BT003469-1|AAO39472.1|  523|Drosophila melanogaster RE70568p
           protein.
          Length = 523

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 330 PGRPTAPGSWDPQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 464
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 462 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 506


>AE014134-3038|AAF53756.1|  440|Drosophila melanogaster CG10699-PA,
           isoform A protein.
          Length = 440

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 330 PGRPTAPGSWDPQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 464
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 379 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 423


>AE014134-3037|AAF53758.2|  520|Drosophila melanogaster CG10699-PB,
           isoform B protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 330 PGRPTAPGSWDPQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 464
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 459 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 503


>AF109306-1|AAD02889.1|  440|Drosophila melanogaster LIM homeodomain
           transcriptionfactor protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +3

Query: 330 PGRPTAPGSWDPQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 464
           P  P +P SW     STN     + AN N+  + + N   GG SG
Sbjct: 379 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSRSHNNNNSSGGGSG 423


>AF219383-1|AAF23183.1| 1023|Drosophila melanogaster tiptop protein
           protein.
          Length = 1023

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +3

Query: 315 TAAN*PGRPTAPGSWDPQGDSTNYGGR-----LDWANKNAEAAIDI 437
           TAA   G  ++ G+  P G S+N GGR       W NK A+ A D+
Sbjct: 270 TAARSLGATSSVGAGVPAGASSNSGGRHSAWQSHWLNKGADTAKDV 315


>AE014134-3557|AAF57242.3| 1024|Drosophila melanogaster CG12630-PA
           protein.
          Length = 1024

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +3

Query: 315 TAAN*PGRPTAPGSWDPQGDSTNYGGR-----LDWANKNAEAAIDI 437
           TAA   G  ++ G+  P G S+N GGR       W NK A+ A D+
Sbjct: 271 TAARSLGATSSVGAGVPAGASSNSGGRHSAWQSHWLNKGADTAKDV 316


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,834,846
Number of Sequences: 53049
Number of extensions: 727600
Number of successful extensions: 1703
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1701
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)