Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_C01
         (870 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    24   1.8  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   3.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   3.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   3.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   3.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   3.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   3.1  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   3.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   3.1  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   5.5  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   7.2  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   7.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   7.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   7.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   9.5  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/28 (35%), Positives = 10/28 (35%)
 Frame = +3

Query: 762 PPPKXXPPXXXXPPXXXPXXPPPPXPXP 845
           P PK   P         P  PP P P P
Sbjct: 78  PSPKRSSPILAEKVSVSPTTPPTPSPPP 105



 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/40 (30%), Positives = 12/40 (30%)
 Frame = +3

Query: 666 PXPPPPXPPPPXXPXPGGPPPFXXGGXXGXPPPPPKXXPP 785
           P  P   PP    P P    P         P  PP   PP
Sbjct: 65  PIRPVALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPP 104



 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/34 (29%), Positives = 11/34 (32%)
 Frame = +3

Query: 762 PPPKXXPPXXXXPPXXXPXXPPPPXPXPXPPPPP 863
           PP +  P      P         P   P P PPP
Sbjct: 72  PPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPP 105



 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/34 (29%), Positives = 10/34 (29%)
 Frame = +1

Query: 763 PPPNXXPXXXXXPPXXXXXXPPPPXXXPXPXPPP 864
           PP    P      P         P   P P PPP
Sbjct: 72  PPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPP 105


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 824 PPPPPXPPXPXPP 862
           PP P  PP P PP
Sbjct: 175 PPLPQVPPLPLPP 187



 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/38 (34%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
 Frame = +3

Query: 762 PPPKXXPPXXXXPPXXXPXXPPPPXPX--PXPPPPPXP 869
           P P    P    PP        PP P   P P PP  P
Sbjct: 153 PNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFP 190


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -1

Query: 606 VICLRFXIXYHDXXXLHYXXSLKYICAHVYLITLM 502
           +IC  +   YH      +   LKY    +Y++T++
Sbjct: 20  LICDSYLKIYHKEKYRKFCRILKYFIIAIYVLTIL 54


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 822 PPPPXPXPXPPPPP 863
           PPPP P   PP  P
Sbjct: 736 PPPPHPHHQPPRNP 749


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 822 PPPPXPXPXPPPPP 863
           PPPP P   PP  P
Sbjct: 628 PPPPHPHHQPPRNP 641


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 780 PPXXXXPPXXXPXXPPPPXPXPXP 851
           PP    PP   P  P  P   P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 780 PPXXXXPPXXXPXXPPPPXPXPXP 851
           PP    PP   P  P  P   P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 780 PPXXXXPPXXXPXXPPPPXPXPXP 851
           PP    PP   P  P  P   P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 780 PPXXXXPPXXXPXXPPPPXPXPXP 851
           PP    PP   P  P  P   P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 780 PPXXXXPPXXXPXXPPPPXPXPXP 851
           PP    PP   P  P  P   P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 780 PPXXXXPPXXXPXXPPPPXPXPXP 851
           PP    PP   P  P  P   P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 780 PPXXXXPPXXXPXXPPPPXPXPXP 851
           PP    PP   P  P  P   P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 780 PPXXXXPPXXXPXXPPPPXPXPXP 851
           PP    PP   P  P  P   P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
          protein 15 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 68 DANAKNDQILRNSLXC 21
          D   KNDQ+ RN L C
Sbjct: 29 DTILKNDQMTRNYLDC 44


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
          protein 16 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 77 ISFDANAKNDQILRNSLXC 21
          I  D   KND++ RN L C
Sbjct: 28 IDVDEILKNDRLTRNYLDC 46


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
          protein 9 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 77 ISFDANAKNDQILRNSLXC 21
          I  D   KND++ RN L C
Sbjct: 28 IDVDEILKNDRLTRNYLDC 46


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 822 PPPPXPXPXPPP 857
           PP P P P P P
Sbjct: 392 PPEPVPTPEPQP 403



 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 828 PPXPXPXPPPPP 863
           PP P P P P P
Sbjct: 392 PPEPVPTPEPQP 403


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 830 PPPXPPXPXPPP 865
           P P P  P PPP
Sbjct: 205 PEPVPSTPYPPP 216


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3

Query: 724 GGPPGXGXXGGGGXGGG 674
           GG  G G  G  G GGG
Sbjct: 92  GGGRGGGRDGDRGDGGG 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,575
Number of Sequences: 336
Number of extensions: 5711
Number of successful extensions: 42
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)