Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_B22
(899 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1685.10 |rps27||40S ribosomal protein S27|Schizosaccharomyce... 139 6e-34
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.055
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.22
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 30 0.52
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.90
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.6
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.6
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 3.6
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 6.3
>SPBC1685.10 |rps27||40S ribosomal protein S27|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 83
Score = 139 bits (336), Expect = 6e-34
Identities = 60/82 (73%), Positives = 70/82 (85%)
Frame = +3
Query: 78 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 257
M LA+DLL+PS SE RKHKLK+LV P S+FMDVKCPGC+ ITTVFSHAQ VV+C C+
Sbjct: 1 MVLAVDLLNPSHESEMRKHKLKQLVQGPRSFFMDVKCPGCFNITTVFSHAQTVVICGSCA 60
Query: 258 TILCQPTGGRARLTEGCSFRRK 323
++LCQPTGG+ARL EGCSFRRK
Sbjct: 61 SVLCQPTGGKARLMEGCSFRRK 82
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 36.7 bits (81), Expect = 0.004
Identities = 28/113 (24%), Positives = 31/113 (27%)
Frame = +3
Query: 513 PXPXIPPXXXVNXXPKXXXPSXXFPXXPXXXXPPKKXPPXXKFXXXPPPXXXPPKNPPXX 692
P +PP + P PS P P P P P P PP P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSV 1166
Query: 693 PXXXPPXPSLFXXPPVXXGXXGXRXXXRLXSXXXXPPPAXPVXXFXXPLPXPP 851
P PS PPV G P P+ V P PP
Sbjct: 1167 AAPPVPAPS-SGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 35.5 bits (78), Expect = 0.010
Identities = 30/121 (24%), Positives = 34/121 (28%), Gaps = 3/121 (2%)
Frame = +3
Query: 513 PXPXIPPXXXVNXXPKXXXPSXXFPXXPXXXXPPKKXPPXXKFXXXPPPXXXPPKNPPXX 692
P PP + P PS P P P PP K PP P P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPA----PSGAPPVPKPSVAAPPVPAPSSGIPPV 1181
Query: 693 PXXX---PPXPSLFXXPPVXXGXXGXRXXXRLXSXXXXPPPAXPVXXFXXPLPXPPPXXX 863
P PP P PPV G + P P+ + P PP
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPA 1241
Query: 864 P 866
P
Sbjct: 1242 P 1242
Score = 31.1 bits (67), Expect = 0.22
Identities = 19/70 (27%), Positives = 22/70 (31%)
Frame = +3
Query: 513 PXPXIPPXXXVNXXPKXXXPSXXFPXXPXXXXPPKKXPPXXKFXXXPPPXXXPPKNPPXX 692
P +PP + P PS P P PP PP PP P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVP----PPSTAPPVPTPSAGLPPVPVPTAKAPPV 1239
Query: 693 PXXXPPXPSL 722
P PS+
Sbjct: 1240 PAPSSEAPSV 1249
Score = 30.7 bits (66), Expect = 0.29
Identities = 28/128 (21%), Positives = 30/128 (23%)
Frame = +3
Query: 513 PXPXIPPXXXVNXXPKXXXPSXXFPXXPXXXXPPKKXPPXXKFXXXPPPXXXPPKNPPXX 692
P IP + P PS P P P P P PP P
Sbjct: 1069 PSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP--VPKP 1126
Query: 693 PXXXPPXPSLFXXPPVXXGXXGXRXXXRLXSXXXXPPPAXPVXXFXXPLPXPPPXXXPXX 872
PP P PPV P P+ P PP P
Sbjct: 1127 SVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAA 1186
Query: 873 XFXXXXPP 896
PP
Sbjct: 1187 GVPPVPPP 1194
Score = 30.7 bits (66), Expect = 0.29
Identities = 35/133 (26%), Positives = 38/133 (28%), Gaps = 5/133 (3%)
Frame = +3
Query: 513 PXPX-IPPXXXVNXX-PKXXXPSXXFPXXPXXXXPPKKXPPXXKFXXXPPPXXXPPKNPP 686
P P IPP + P PS P P P P P P PP P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP--VP 1143
Query: 687 XXPXXXPPXPSLFXXPPVXXGXXGXRXXXRLXSXXXXPPPAXPVXXFXXPLPXP---PPX 857
PP P+ PPV S PP P P+P P PP
Sbjct: 1144 KPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS--GIPPVPKPAAG-VPPVPPPSEAPPV 1200
Query: 858 XXPXXXFXXXXPP 896
P PP
Sbjct: 1201 PKPSVGVPPVPPP 1213
Score = 29.1 bits (62), Expect = 0.90
Identities = 29/107 (27%), Positives = 31/107 (28%), Gaps = 5/107 (4%)
Frame = +3
Query: 594 PXXXXPPKKXPPXXKFXXXPPPXXXPPK-NPPXXPXXXP----PXPSLFXXPPVXXGXXG 758
P PP PP P PPK +PP P P P L PPV
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPK-LSS 1019
Query: 759 XRXXXRLXSXXXXPPPAXPVXXFXXPLPXPPPXXXPXXXFXXXXPPP 899
L S P P P P+P P PPP
Sbjct: 1020 KAPPVPLPSADAPPIPV-PSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/93 (21%), Positives = 20/93 (21%)
Frame = +2
Query: 587 PXPXXXXPPXKXAXXXXIXGXPPPXXGXPXKPSXXXXXXPPXXLPFXXPPGXPGXXGGXX 766
P P PP P P S PP P P P G
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP 1084
Query: 767 PXPPXXXSXXPPPGXXGXXFXXPPXXXPPXXXP 865
P P P P PP P
Sbjct: 1085 VPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.055
Identities = 31/133 (23%), Positives = 36/133 (27%), Gaps = 4/133 (3%)
Frame = +1
Query: 511 SPXPGSPLXXGLIXXPXXXPPXXXSPXXXXXXXPXKKXXLXXNXGXPPPPXXXPXKTLXX 690
+P P P G + P PP +P PPP L
Sbjct: 252 APPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTS-----KPPLPPPSSRVSAAALAA 306
Query: 691 XXXXXPPXPPFFXXPRXPXXXGGXXXXPAXXPXXXPPPRXXRXXLFXXP----XPXPPPX 858
PP PP R G + P PPPR P PPP
Sbjct: 307 NKKRPPPPPPPSRRNRGKPPIGNGSSN-SSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Query: 859 XPXXPXSXXXPPP 897
P + PPP
Sbjct: 366 PRSAPSTGRQPPP 378
Score = 32.3 bits (70), Expect = 0.097
Identities = 24/109 (22%), Positives = 26/109 (23%)
Frame = +3
Query: 528 PPXXXVNXXPKXXXPSXXFPXXPXXXXPPKKXPPXXKFXXXPPPXXXPPKNPPXXPXXXP 707
PP P P PP P P PP PP P P
Sbjct: 377 PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
Query: 708 PXPSLFXXPPVXXGXXGXRXXXRLXSXXXXPPPAXPVXXFXXPLPXPPP 854
P + P L + PP P P P P P
Sbjct: 437 PSLPM-GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +2
Query: 650 PPPXXGXPXKPSXXXXXXPPXXLPFXXPPGXPGXXGGXXPXPPXXXSXXPPP 805
PPP KP P PP G P PP S PPP
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPP--PPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +2
Query: 707 PXXLPFXXPPGXPGXXGGXXPXPPXXXSXXPPPGXXGXXFXXPPXXXPPXXXP 865
P LP PP P P PP P P PP P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.22
Identities = 23/82 (28%), Positives = 25/82 (30%), Gaps = 6/82 (7%)
Frame = +3
Query: 513 PXPXIPPXXXVNXXPKXXXPSXXF--PXXPXXXXP-PKKXPPXXKFXXXPPPXXXPPKNP 683
P PP P P P P P P K PP P P K+P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 684 ---PXXPXXXPPXPSLFXXPPV 740
P P PP P PP+
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPPL 206
Score = 30.7 bits (66), Expect = 0.29
Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Frame = +3
Query: 609 PPKKXPPXXKFXXXPPPXXXPPKN--PPXXPXXXPPXPSLFXXPPVXXGXXGXRXXXRLX 782
PP P PP PP+ PP P PP PS PP+ +
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPS--KAPPIPSSLP---PPAQPA 178
Query: 783 SXXXXPPPAXPVXXFXXPLP--XPPP 854
+ PP A + P+P PPP
Sbjct: 179 APVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 27.5 bits (58), Expect = 2.7
Identities = 23/92 (25%), Positives = 26/92 (28%)
Frame = +3
Query: 624 PPXXKFXXXPPPXXXPPKNPPXXPXXXPPXPSLFXXPPVXXGXXGXRXXXRLXSXXXXPP 803
PP P PP + P P PP P+ PP+ PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPA--SAPPIPSKAP--------PIPSSLPP 173
Query: 804 PAXPVXXFXXPLPXPPPXXXPXXXFXXXXPPP 899
PA P P P P PPP
Sbjct: 174 PAQPAAPVKSP-PSAPSLPSAVPPMPPKVPPP 204
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.9 bits (64), Expect = 0.52
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = +2
Query: 644 GXP-PPXXGXPXKPSXXXXXXPPXXLPFXXPPGXPGXXGGXXPXP--PXXXSXXPPPGXX 814
G P PP G P P+ P PPG P G P P PPG
Sbjct: 502 GVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPGATAPPGAP 561
Query: 815 G 817
G
Sbjct: 562 G 562
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 0.90
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 798 PPPAXPVXXFXXPLPXPPPXXXPXXXFXXXXPPP 899
PPP P P P P P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +2
Query: 671 PXKPSXXXXXXPPXXLPFXXPPGXPGXXGGXXPXPPXXXSXXPPPGXXGXXFXXPPXXXP 850
P P P P PP P G P PP PPPG G PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPP--PAPIMGGPPPPP------PPPGVAGAGPPPPPPPPP 783
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +3
Query: 528 PPXXXVNXXPKXXXPSXXFPXXPXXXXPPKKXPPXXKFXXXPPPXXXPP 674
PP V P P P PP PP PPP PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/69 (24%), Positives = 18/69 (26%)
Frame = +1
Query: 649 PPPPXXXPXKTLXXXXXXXPPXPPFFXXPRXPXXXGGXXXXPAXXPXXXPPPRXXRXXLF 828
PPPP T PP P P P G P PP +
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 829 XXPXPXPPP 855
P P P
Sbjct: 793 YAPAPQAEP 801
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 594 PXXXXPPKKXPPXXKFXXXPPPXXXPPKNPPXXPXXXPPXP 716
P P PP PPP PP P PP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 772 PAXXPXXXPPPRXXRXXLFXXPXPXPPPXXPXXPXSXXXPPP 897
PA P PPP + P P PPP P + PPP
Sbjct: 744 PAPAPIPVPPPAP----IMGGPPPPPPP--PGVAGAGPPPPP 779
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/74 (22%), Positives = 19/74 (25%)
Frame = +3
Query: 519 PXIPPXXXVNXXPKXXXPSXXFPXXPXXXXPPKKXPPXXKFXXXPPPXXXPPKNPPXXPX 698
P PP + P P PP PP PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 699 XXPPXPSLFXXPPV 740
P P P +
Sbjct: 792 YYAPAPQAEPEPKI 805
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Frame = +3
Query: 585 PXXPXXXXPPKKX---PPXXKFXXXPPPXXXP-PKNPPXXPXXXPPXPS 719
P P PP+ PP PPP P P PP P PP P+
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP--PPPLPA 1737
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 612 PKKXPPXXKFXXXPPPXXXPPKNPPXXPXXXPPXPSLFXXPPVXXG 749
P PP PP P PP P PP PS PP+ G
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAP--TPPPPPMSVPPPPS---APPMPAG 1726
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.3 bits (60), Expect = 1.6
Identities = 29/112 (25%), Positives = 30/112 (26%)
Frame = -1
Query: 854 GGGXGXGXXKXXNRXXRGGGXXXGXXAGXXXXPPXXXGNRGXXKKGGXGGXXXXXXXRVF 675
GG + GG G G PP G G GG GG
Sbjct: 169 GGLASHALGNLFHHRGHNGGGFGGFGGGSGGPPPGPGGFGGF---GGFGGEGHH-----H 220
Query: 674 XGXXXGGGGXPKFXXRXXFFXGXXXXXXXGEXXXGGXXFGXXINPXXRGDPG 519
G GGG F F G G GG G P G PG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.1 bits (57), Expect = 3.6
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = -2
Query: 853 GGGXGRGXXKXXTGXAGGGXXXXXXRRXXXRXPXXPXXTGGXXKREGXGGXXXGXXGGFX 674
G GRG + G GG R R GG R G G G GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG-R 64
Query: 673 GGXXXG 656
GG G
Sbjct: 65 GGAKGG 70
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 624 PPXXKFXXXPPPXXXPPKNPPXXP 695
PP PPP PP PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,732,335
Number of Sequences: 5004
Number of extensions: 48978
Number of successful extensions: 225
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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