Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_B21
(875 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC31G5.03 |rps1101|rps11-1|40S ribosomal protein S11|Schizosac... 44 4e-05
SPAC144.11 |rps1102|rps11-2, rps11|40S ribosomal protein S11|Sch... 44 4e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 42 1e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.003
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.017
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.38
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 30 0.38
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.50
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.87
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.87
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 1.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.5
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.6
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 6.1
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 6.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 6.1
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 6.1
>SPAC31G5.03 |rps1101|rps11-1|40S ribosomal protein
S11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 43.6 bits (98), Expect = 4e-05
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 156 HKNVGLGFKTPXXAIXGXYIDKSVPXLGXV*FXG 257
+K+VGLGFKTP AI G Y+DK P +G V G
Sbjct: 32 YKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRG 65
Score = 36.7 bits (81), Expect = 0.004
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +2
Query: 53 LSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRHP*ECWFRLQNSXXXD*XXLH*QKCPX 232
+++++ Q+E+AFQKQ +F N K G R+ + + + +KCP
Sbjct: 1 MATELVVQSERAFQKQPHIFQNAKKGAGRRWYK---DVGLGFKTPAEAIYGEYVDKKCPF 57
Query: 233 XGQXLIRGRXPTGVFXKIKXPKXFXI 310
GQ IRGR TG K + I
Sbjct: 58 VGQVSIRGRILTGTVVSTKMHRTIII 83
>SPAC144.11 |rps1102|rps11-2, rps11|40S ribosomal protein
S11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 43.6 bits (98), Expect = 4e-05
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 156 HKNVGLGFKTPXXAIXGXYIDKSVPXLGXV*FXG 257
+K+VGLGFKTP AI G Y+DK P +G V G
Sbjct: 32 YKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRG 65
Score = 36.7 bits (81), Expect = 0.004
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +2
Query: 53 LSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRHP*ECWFRLQNSXXXD*XXLH*QKCPX 232
+++++ Q+E+AFQKQ +F N K G R+ + + + +KCP
Sbjct: 1 MATELVVQSERAFQKQPHIFQNAKKGAGRRWYK---DVGLGFKTPAEAIYGEYVDKKCPF 57
Query: 233 XGQXLIRGRXPTGVFXKIKXPKXFXI 310
GQ IRGR TG K + I
Sbjct: 58 VGQVSIRGRILTGTVVSTKMHRTIII 83
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.9 bits (94), Expect = 1e-04
Identities = 28/85 (32%), Positives = 30/85 (35%), Gaps = 10/85 (11%)
Frame = +1
Query: 628 PPPPXPS------PPLXXGVSXX----PPPKQKKXXXGXXGXPPPPXXXXAXKPPFSFXQ 777
PPPP PS PP+ G S PPP + G PP PP S
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 778 TXXXXPPLLFXPPXPXPPPXPPXXP 852
T PPL PP PP P
Sbjct: 372 TGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 35.1 bits (77), Expect = 0.013
Identities = 27/101 (26%), Positives = 29/101 (28%), Gaps = 4/101 (3%)
Frame = +1
Query: 562 PXXPXPXXXPXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPP--P 735
P P P P PPP P P PPP PPP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPP-PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 736 XXXXAXKPPFSFXQTXXXXPPLLFXP--PXPXPPPXPPXXP 852
PP + PP+ P P PP PP P
Sbjct: 397 GRSAPALPPLG-NASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
Score = 34.3 bits (75), Expect = 0.023
Identities = 24/95 (25%), Positives = 24/95 (25%), Gaps = 1/95 (1%)
Frame = +1
Query: 562 PXXPXPXXXPXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPP-PPX 738
P P PP PP P P PP G PP PP
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS 452
Query: 739 XXXAXKPPFSFXQTXXXXPPLLFXPPXPXPPPXPP 843
A P P PP P P P P
Sbjct: 453 APIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 30.3 bits (65), Expect = 0.38
Identities = 22/90 (24%), Positives = 24/90 (26%)
Frame = +1
Query: 571 PXPXXXPXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPPPXXXXA 750
P P P P P P P PP G PP + P
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP---IAPVSMNPAINST 287
Query: 751 XKPPFSFXQTXXXXPPLLFXPPXPXPPPXP 840
KPP + L P PPP P
Sbjct: 288 SKPPLPPPSSRVSAAALAANKKRPPPPPPP 317
Score = 30.3 bits (65), Expect = 0.38
Identities = 27/106 (25%), Positives = 30/106 (28%), Gaps = 9/106 (8%)
Frame = +1
Query: 562 PXXPXPXXXPXP---PXPXXXXXXXPPPPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPP 732
P P P P P P PP P P + + PP P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 733 PXXXXAXKP------PFSFXQTXXXXPPLLFXPPXPXPPPXPPXXP 852
P + P P S PPL P P PP P P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPL--PPSAPIAPPLPAGMP 464
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.1 bits (82), Expect = 0.003
Identities = 27/98 (27%), Positives = 29/98 (29%), Gaps = 4/98 (4%)
Frame = +1
Query: 562 PXXPXPXXXPXPPXPXXXXXXXPPPPXPSPPL---XXGVSXXPPPKQ-KKXXXGXXGXPP 729
P P P P P P P P PP+ GV PPP + G PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 730 PPXXXXAXKPPFSFXQTXXXXPPLLFXPPXPXPPPXPP 843
P A P P PP P P P
Sbjct: 1210 VPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 35.9 bits (79), Expect = 0.008
Identities = 26/100 (26%), Positives = 29/100 (29%), Gaps = 3/100 (3%)
Frame = +1
Query: 562 PXXPXPXXXPXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPPKQK---KXXXGXXGXPPP 732
P P P P P P P P PP+ P PK G PP
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 733 PXXXXAXKPPFSFXQTXXXXPPLLFXPPXPXPPPXPPXXP 852
P A P + P + PP P P P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 34.3 bits (75), Expect = 0.023
Identities = 26/96 (27%), Positives = 28/96 (29%), Gaps = 2/96 (2%)
Frame = +1
Query: 571 PXPXXXPXPPXPXXXXXXXPPPPXPS--PPLXXGVSXXPPPKQKKXXXGXXGXPPPPXXX 744
P P P PP P PS PP+ S P PK G PPP
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSS---GAPSAPPPVPAP 1069
Query: 745 XAXKPPFSFXQTXXXXPPLLFXPPXPXPPPXPPXXP 852
+ P P PP P P P P
Sbjct: 1070 SSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 31.9 bits (69), Expect = 0.12
Identities = 25/92 (27%), Positives = 28/92 (30%), Gaps = 1/92 (1%)
Frame = +1
Query: 571 PXPXXXPXPPXPXXXXXXXP-PPPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPPPXXXX 747
P P PP P PPP P+P + P P G PP P
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSE--IPSIPAPSGAPPVPAPSGIPPVPKPSV 1099
Query: 748 AXKPPFSFXQTXXXXPPLLFXPPXPXPPPXPP 843
A P P + PP P P PP
Sbjct: 1100 AAPP---------VPKPSVAVPPVPAPSGAPP 1122
Score = 29.5 bits (63), Expect = 0.66
Identities = 25/98 (25%), Positives = 27/98 (27%), Gaps = 4/98 (4%)
Frame = +1
Query: 562 PXXPXPXXXPXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPPPXX 741
P P P P P P +PP+ P PK PP P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPS------VAAPPVPAP 1155
Query: 742 XXAXKPPFSFXQTXXXXPPLLFXPPXPXP----PPXPP 843
A P P PP P P PP PP
Sbjct: 1156 SGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +1
Query: 589 PXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPPP 735
P PP P P P P PP + PPP G PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 34.7 bits (76), Expect = 0.017
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 571 PXPXXXPXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPP 687
P P P P P PPPP P PP G PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPP-PPGVAGAGPPPPP 779
Score = 33.5 bits (73), Expect = 0.040
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 563 PXXPXXXXXPXPPXXXXXXXXXPPPPXPPPP 655
P P P PP PPPP PPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.071
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 571 PXPXXXPXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPPP 735
P P P PP P PPPP P G PPP G P P
Sbjct: 744 PAPAPIPVPP-PAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 31.9 bits (69), Expect = 0.12
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 590 PXPPXXXXXXXXXPPPPXPPPPXXXGFLXPPPXNKKXXXXGXXGXPPP 733
P PP P P PPP G PPP G PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +1
Query: 724 PPPPXXXXAXKPPFSFXQTXXXXPPLLFXPPXPXPPP 834
PPPP P P++ PP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.7 bits (76), Expect = 0.017
Identities = 28/89 (31%), Positives = 30/89 (33%), Gaps = 3/89 (3%)
Frame = +1
Query: 577 PXXXPXPPXPXXXXXXXPP---PPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPPPXXXX 747
P P PP P PP PP PS P S P P + PPP
Sbjct: 124 PPSAPAPPTPQSELR--PPTSAPPRPSIPPPSPASAPPIPSKAPPIPS--SLPPPAQPAA 179
Query: 748 AXKPPFSFXQTXXXXPPLLFXPPXPXPPP 834
K P S PP+ PP PPP
Sbjct: 180 PVKSPPSAPSLPSAVPPM---PPKVPPPP 205
Score = 28.3 bits (60), Expect = 1.5
Identities = 26/94 (27%), Positives = 28/94 (29%), Gaps = 7/94 (7%)
Frame = +1
Query: 571 PXPXXXPXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPPKQK----KXXXGXXGXPP--P 732
P P P P PP P +PP+ S PPP Q K P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIP---SSLPPPAQPAAPVKSPPSAPSLPSAVP 195
Query: 733 PXXXXAXKPPFSFXQTXXXXP-PLLFXPPXPXPP 831
P PP S P F PP P
Sbjct: 196 PMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAP 229
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.3 bits (65), Expect = 0.38
Identities = 24/95 (25%), Positives = 26/95 (27%), Gaps = 11/95 (11%)
Frame = +1
Query: 589 PXPPXPXXXXXXXPPPPX--------PSPPLXXGVSXXPPPKQKKXXXGXXGXPPP---P 735
P PP PPPP P PP+ PP G PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 736 XXXXAXKPPFSFXQTXXXXPPLLFXPPXPXPPPXP 840
PP PP + P PP P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 30.3 bits (65), Expect = 0.38
Identities = 24/95 (25%), Positives = 26/95 (27%), Gaps = 11/95 (11%)
Frame = +1
Query: 589 PXPPXPXXXXXXXPPPPX--------PSPPLXXGVSXXPPPKQKKXXXGXXGXPPP---P 735
P PP PPPP P PP+ PP G PPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 280
Query: 736 XXXXAXKPPFSFXQTXXXXPPLLFXPPXPXPPPXP 840
PP PP + P PP P
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 30.3 bits (65), Expect = 0.38
Identities = 24/95 (25%), Positives = 26/95 (27%), Gaps = 11/95 (11%)
Frame = +1
Query: 589 PXPPXPXXXXXXXPPPPX--------PSPPLXXGVSXXPPPKQKKXXXGXXGXPPP---P 735
P PP PPPP P PP+ PP G PPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 293
Query: 736 XXXXAXKPPFSFXQTXXXXPPLLFXPPXPXPPPXP 840
PP PP + P PP P
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 30.3 bits (65), Expect = 0.38
Identities = 24/95 (25%), Positives = 26/95 (27%), Gaps = 11/95 (11%)
Frame = +1
Query: 589 PXPPXPXXXXXXXPPPPX--------PSPPLXXGVSXXPPPKQKKXXXGXXGXPPP---P 735
P PP PPPP P PP+ PP G PPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 306
Query: 736 XXXXAXKPPFSFXQTXXXXPPLLFXPPXPXPPPXP 840
PP PP + P PP P
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 26.6 bits (56), Expect = 4.6
Identities = 20/87 (22%), Positives = 22/87 (25%), Gaps = 3/87 (3%)
Frame = +1
Query: 589 PXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPP---PXXXXAXKP 759
P P P P PP+ PP G PPP P
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Query: 760 PFSFXQTXXXXPPLLFXPPXPXPPPXP 840
P PP + P PP P
Sbjct: 263 PMHHEPGEHMPPPPMHHEPGEHMPPPP 289
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 30.3 bits (65), Expect = 0.38
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = +1
Query: 631 PPPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPP--PXXXXAXKPPFSFXQTXXXXPPLL 804
PP P P+ S P K G PPP P PP + + PP +
Sbjct: 979 PPSNPYTPIAVASSTVNPAHTYKPHGGSQIVPPPKQPANRVVPLPPTASQRASAYEPPTV 1038
Query: 805 FXP-PXPXPPPXPPXXP 852
P P P P P
Sbjct: 1039 SVPSPSALSPSVTPQLP 1055
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +1
Query: 628 PPPPXPSPPLXXGVSXXPPPKQKKXXXG-XXGXPPPP 735
PPPP PP S P P + G PPPP
Sbjct: 240 PPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPP 276
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 629 PPPPXPPPP 655
PPPP PPPP
Sbjct: 189 PPPPPPPPP 197
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.87
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 577 PXXXPXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPPP 735
P P P PPPP S P PPP G PPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVP--------PPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = +1
Query: 679 PPPKQKKXXXGXXGXPPPPXXXXAXKPPFSFXQTXXXXPPLLFXPPXPXPPPXP 840
PP + + P PP + PP S PP+ PP PPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPS-------APPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +1
Query: 730 PPXXXXAXKPPFSFXQTXXXXPPLLFXPPXPXPPPXPPXXP 852
PP + PP T PP + PP P PP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPP--PPPMSVPPPPSAPPMPAGPP 1728
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 571 PXPXXXPXPPXPXXXXXXXPPPPXPSPPL 657
P P PP P PP P PPL
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 571 PXPXXXPXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPP 687
P P PP P PPP +PP+ G PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVP--PPPS--APPMPAGPPSAPPP 1733
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.1 bits (62), Expect = 0.87
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
Frame = -1
Query: 761 GGFXAXXXXGGGGXPXXPXXXFFCXGGGXXETPXXRGGEGXGGG-GXXXXXXXGXGGXGX 585
GG G GG P P F GG E G G GGG G G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGG-FGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Query: 584 XXGXGXXG 561
G G G
Sbjct: 246 GFGGGLGG 253
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.7 bits (61), Expect = 1.1
Identities = 19/72 (26%), Positives = 22/72 (30%)
Frame = +1
Query: 637 PXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPPPXXXXAXKPPFSFXQTXXXXPPLLFXPP 816
P + P G S PP G P PP P + Q P + P
Sbjct: 479 PSQNAPFIPGTSAPLPPTT----FAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPG 534
Query: 817 XPXPPPXPPXXP 852
P P P P P
Sbjct: 535 MPAPFPGYPAVP 546
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 629 PPPPXPPPPXXXGFLXPPP 685
PPPP PPP PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPP 27
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 793 PPLLFXPPXPXPPPXPP 843
PP F PP PPP PP
Sbjct: 14 PPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 577 PXXXPXPPXPXXXXXXXPPPPXPSP 651
P P PP P PPP P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +2
Query: 572 PXXXXXPXPPXXXXXXXXXPPPPXPP 649
P P PP PPPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +1
Query: 577 PXXXPXPPXPXXXXXXXPPPPXPSPP 654
P P PP P PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/42 (26%), Positives = 15/42 (35%)
Frame = +1
Query: 709 GXXGXPPPPXXXXAXKPPFSFXQTXXXXPPLLFXPPXPXPPP 834
G PP P P + + + + PP P PPP
Sbjct: 336 GAFSAPPAPFFPLGFSPHLNDESSRSRWSNISYSPPPPPPPP 377
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 796 PLLFXPPXPXPPPXPP 843
P PP P PPP PP
Sbjct: 802 PFKAPPPAPLPPPAPP 817
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 629 PPPPXPPPP 655
PPPP PPPP
Sbjct: 306 PPPPPPPPP 314
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 6.1
Identities = 21/97 (21%), Positives = 25/97 (25%)
Frame = +1
Query: 562 PXXPXPXXXPXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPPPXX 741
P P P P P P P PP+ P Q+ P P
Sbjct: 578 PVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQP 637
Query: 742 XXAXKPPFSFXQTXXXXPPLLFXPPXPXPPPXPPXXP 852
A P P++ P PP P P
Sbjct: 638 PAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVP 674
Score = 25.8 bits (54), Expect = 8.1
Identities = 23/93 (24%), Positives = 26/93 (27%)
Frame = +1
Query: 562 PXXPXPXXXPXPPXPXXXXXXXPPPPXPSPPLXXGVSXXPPPKQKKXXXGXXGXPPPPXX 741
P P P P P P P+ V P P P PP
Sbjct: 551 PVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVA 610
Query: 742 XXAXKPPFSFXQTXXXXPPLLFXPPXPXPPPXP 840
A + P S Q P + P P PP P
Sbjct: 611 PVAPEVP-SVPQ-RPAVPVVPEAPSVPQPPAAP 641
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 629 PPPPXPPPP 655
PPPP PPPP
Sbjct: 945 PPPPPPPPP 953
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,625,420
Number of Sequences: 5004
Number of extensions: 50486
Number of successful extensions: 369
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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