Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_B18
(882 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC142978-1|AAI42979.1| 439|Homo sapiens exosome component 9 pro... 200 5e-51
AJ517294-1|CAD56889.1| 456|Homo sapiens polymyositis/scleroderm... 200 5e-51
AJ505989-1|CAD44530.1| 439|Homo sapiens polymyositis/scleroderm... 200 5e-51
U09215-1|AAA18832.1| 372|Homo sapiens PM-Scl-75 autoantigen pro... 105 2e-22
M58460-1|AAA58384.1| 355|Homo sapiens autoantigen protein. 105 2e-22
AC079341-2|AAY40968.1| 355|Homo sapiens unknown protein. 105 2e-22
BC012831-1|AAH12831.1| 291|Homo sapiens exosome component 7 pro... 88 3e-17
D29958-1|BAA06226.1| 290|Homo sapiens KIAA0116 protein. 87 8e-17
BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8 pro... 74 8e-13
AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein. 74 8e-13
AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein... 74 8e-13
>BC142978-1|AAI42979.1| 439|Homo sapiens exosome component 9
protein.
Length = 439
Score = 200 bits (488), Expect = 5e-51
Identities = 85/161 (52%), Positives = 121/161 (75%)
Frame = +2
Query: 110 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 289
M++T LSNCE+ F+ + + + RLDGR + R + ISFG++YGCCIV LG+T++L +V+
Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS 60
Query: 290 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 469
CE+ PK R EGI+F N+EL+ MAAP FE RQ+DL V L RL+E+C ++SKCID ES
Sbjct: 61 CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTES 120
Query: 470 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFR 592
LC+V EKVW +R+++ +LNHDGN+ + ASIA + ++ HFR
Sbjct: 121 LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFR 161
Score = 54.8 bits (126), Expect = 4e-07
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 594 RPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALYSND-ILLSDPNFLEESV 755
RPD + GD V ++T E+DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 162 RPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGAYLLVDPNEREERV 216
>AJ517294-1|CAD56889.1| 456|Homo sapiens polymyositis/scleroderma
autoantigen 1 protein.
Length = 456
Score = 200 bits (488), Expect = 5e-51
Identities = 85/161 (52%), Positives = 121/161 (75%)
Frame = +2
Query: 110 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 289
M++T LSNCE+ F+ + + + RLDGR + R + ISFG++YGCCIV LG+T++L +V+
Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS 60
Query: 290 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 469
CE+ PK R EGI+F N+EL+ MAAP FE RQ+DL V L RL+E+C ++SKCID ES
Sbjct: 61 CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTES 120
Query: 470 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFR 592
LC+V EKVW +R+++ +LNHDGN+ + ASIA + ++ HFR
Sbjct: 121 LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFR 161
Score = 54.8 bits (126), Expect = 4e-07
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 594 RPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESV 755
RPD + GD V ++T E+DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 162 RPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV 216
>AJ505989-1|CAD44530.1| 439|Homo sapiens polymyositis/scleroderma
autoantigen 1 protein.
Length = 439
Score = 200 bits (488), Expect = 5e-51
Identities = 85/161 (52%), Positives = 121/161 (75%)
Frame = +2
Query: 110 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 289
M++T LSNCE+ F+ + + + RLDGR + R + ISFG++YGCCIV LG+T++L +V+
Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS 60
Query: 290 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 469
CE+ PK R EGI+F N+EL+ MAAP FE RQ+DL V L RL+E+C ++SKCID ES
Sbjct: 61 CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTES 120
Query: 470 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFR 592
LC+V EKVW +R+++ +LNHDGN+ + ASIA + ++ HFR
Sbjct: 121 LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFR 161
Score = 54.8 bits (126), Expect = 4e-07
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 594 RPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESV 755
RPD + GD V ++T E+DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 162 RPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV 216
>U09215-1|AAA18832.1| 372|Homo sapiens PM-Scl-75 autoantigen
protein.
Length = 372
Score = 105 bits (252), Expect = 2e-22
Identities = 44/77 (57%), Positives = 60/77 (77%)
Frame = +2
Query: 362 MAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGN 541
MAAP FE RQ+DL V L RL+E+C ++SKCID ESLC+V EKVW +R+++ +LNHDGN
Sbjct: 1 MAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGN 60
Query: 542 LTECASIATLASIAHFR 592
+ + ASIA + ++ HFR
Sbjct: 61 IIDAASIAAIVALCHFR 77
Score = 54.8 bits (126), Expect = 4e-07
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 594 RPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESV 755
RPD + GD V ++T E+DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 78 RPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV 132
>M58460-1|AAA58384.1| 355|Homo sapiens autoantigen protein.
Length = 355
Score = 105 bits (252), Expect = 2e-22
Identities = 44/77 (57%), Positives = 60/77 (77%)
Frame = +2
Query: 362 MAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGN 541
MAAP FE RQ+DL V L RL+E+C ++SKCID ESLC+V EKVW +R+++ +LNHDGN
Sbjct: 1 MAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGN 60
Query: 542 LTECASIATLASIAHFR 592
+ + ASIA + ++ HFR
Sbjct: 61 IIDAASIAAIVALCHFR 77
Score = 54.8 bits (126), Expect = 4e-07
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 594 RPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESV 755
RPD + GD V ++T E+DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 78 RPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV 132
>AC079341-2|AAY40968.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 105 bits (252), Expect = 2e-22
Identities = 44/77 (57%), Positives = 60/77 (77%)
Frame = +2
Query: 362 MAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGN 541
MAAP FE RQ+DL V L RL+E+C ++SKCID ESLC+V EKVW +R+++ +LNHDGN
Sbjct: 1 MAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGN 60
Query: 542 LTECASIATLASIAHFR 592
+ + ASIA + ++ HFR
Sbjct: 61 IIDAASIAAIVALCHFR 77
Score = 54.8 bits (126), Expect = 4e-07
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 594 RPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESV 755
RPD + GD V ++T E+DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 78 RPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV 132
>BC012831-1|AAH12831.1| 291|Homo sapiens exosome component 7
protein.
Length = 291
Score = 88.2 bits (209), Expect = 3e-17
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Frame = +2
Query: 110 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILS 280
M LS EK +I V + R+DGR + R +++ + G V LG T IL
Sbjct: 1 MASVTLSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV 60
Query: 281 EVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCID 460
V E+ PK +PNEG + V+ + A P+FE DL + L + + + +D
Sbjct: 61 GVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD 120
Query: 461 LESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFR 592
L++LCI E W L +++ +L GNL + SIA A++ + R
Sbjct: 121 LKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTR 164
>D29958-1|BAA06226.1| 290|Homo sapiens KIAA0116 protein.
Length = 290
Score = 87.0 bits (206), Expect = 8e-17
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 3/159 (1%)
Frame = +2
Query: 125 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCE 295
LS EK +I V + R+DGR + R +++ + G V LG T IL V E
Sbjct: 5 LSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAE 64
Query: 296 VAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLC 475
+ PK +PNEG + V+ + A P+FE DL + L + + + +DL++LC
Sbjct: 65 MGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLKTLC 124
Query: 476 IVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFR 592
I E W L +++ +L GNL + SIA A++ + R
Sbjct: 125 ISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTR 163
>BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8
protein.
Length = 276
Score = 73.7 bits (173), Expect = 8e-13
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Frame = +2
Query: 146 FIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 316
+ ++ + + R DGR E R ++ GS G +V LG T ++ V E A P
Sbjct: 13 YYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTD 72
Query: 317 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 496
P++G + NV+L P+ + +F + + + + ++S+ I E LCI + V
Sbjct: 73 APDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLV 132
Query: 497 WSLRINIKVLNHDGNLTECASIATLASI 580
W L ++ L++DGN+ + + A LA++
Sbjct: 133 WVLYCDLICLDYDGNILDACTFALLAAL 160
>AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein.
Length = 275
Score = 73.7 bits (173), Expect = 8e-13
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Frame = +2
Query: 146 FIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 316
+ ++ + + R DGR E R ++ GS G +V LG T ++ V E A P
Sbjct: 13 YYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTD 72
Query: 317 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 496
P++G + NV+L P+ + +F + + + + ++S+ I E LCI + V
Sbjct: 73 APDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLV 132
Query: 497 WSLRINIKVLNHDGNLTECASIATLASI 580
W L ++ L++DGN+ + + A LA++
Sbjct: 133 WVLYCDLICLDYDGNILDACTFALLAAL 160
>AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein
OIP2 protein.
Length = 265
Score = 73.7 bits (173), Expect = 8e-13
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Frame = +2
Query: 146 FIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 316
+ ++ + + R DGR E R ++ GS G +V LG T ++ V E A P
Sbjct: 11 YYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTD 70
Query: 317 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 496
P++G + NV+L P+ + +F + + + + ++S+ I E LCI + V
Sbjct: 71 APDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLV 130
Query: 497 WSLRINIKVLNHDGNLTECASIATLASI 580
W L ++ L++DGN+ + + A LA++
Sbjct: 131 WVLYCDLICLDYDGNILDACTFALLAAL 158
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,159,553
Number of Sequences: 237096
Number of extensions: 2704483
Number of successful extensions: 4578
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4578
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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